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Search of human proteins with 23510360
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23510360 Ras association domain family 4 [Homo sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23510360 Ras association domain family 4 [Homo sapiens] 647 0.0
gi|25777677 Ras association domain family 2 [Homo sapiens] 350 1e-96
gi|7661964 Ras association domain family 2 [Homo sapiens] 350 1e-96
gi|41393610 Ras association (RalGDS/AF-6) domain family 6 isofor... 196 2e-50
gi|29789443 Ras association (RalGDS/AF-6) domain family 6 isofor... 196 2e-50
gi|30039698 Ras association (RalGDS/AF-6) domain family member 3... 64 2e-10
gi|25777684 Ras association domain family 1 isoform D [Homo sapi... 62 7e-10
gi|25777682 Ras association domain family 1 isoform C [Homo sapi... 62 7e-10
gi|20149588 Ras association domain family 1 isoform A [Homo sapi... 62 7e-10
gi|25777680 Ras association domain family 1 isoform B [Homo sapi... 62 7e-10
gi|32996735 Ras association (RalGDS/AF-6) domain family 5 isofor... 61 2e-09
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 61 2e-09
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.014
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.014
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.014
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 37 0.031
gi|110815800 WD repeat domain 32 [Homo sapiens] 35 0.089
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 34 0.15
gi|18104959 thioredoxin domain containing 9 [Homo sapiens] 33 0.44
gi|119943093 glycogenin 2 isoform a [Homo sapiens] 32 0.58
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 32 0.58
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens] 32 0.76
gi|118918411 zinc finger protein 777 [Homo sapiens] 32 0.76
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 0.99
gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens] 32 0.99
gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens] 32 0.99
gi|169214072 PREDICTED: zinc finger and SCAN domain containing 5... 31 1.3
gi|169214427 PREDICTED: zinc finger and SCAN domain containing 5... 31 1.3
gi|169213343 PREDICTED: zinc finger and SCAN domain containing 5... 31 1.3
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 31 1.7
>gi|23510360 Ras association domain family 4 [Homo sapiens]
Length = 321
Score = 647 bits (1668), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIA 60
MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIA
Sbjct: 1 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIA 60
Query: 61 WGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESS 120
WGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESS
Sbjct: 61 WGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESS 120
Query: 121 TDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSV 180
TDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSV
Sbjct: 121 TDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSV 180
Query: 181 FTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGERTKLKDCEYPL 240
FTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGERTKLKDCEYPL
Sbjct: 181 FTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGERTKLKDCEYPL 240
Query: 241 ISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLT 300
ISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLT
Sbjct: 241 ISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLT 300
Query: 301 MKFQALRLTMLQRLEQLVEAK 321
MKFQALRLTMLQRLEQLVEAK
Sbjct: 301 MKFQALRLTMLQRLEQLVEAK 321
>gi|25777677 Ras association domain family 2 [Homo sapiens]
Length = 326
Score = 350 bits (898), Expect = 1e-96
Identities = 188/330 (56%), Positives = 232/330 (70%), Gaps = 33/330 (10%)
Query: 8 SSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPI 67
+S VP K I K+ELL LKTYN Y+EG++ QLRHREEE I+EGLLNI+WGLRRPI
Sbjct: 7 TSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPI 66
Query: 68 RLQMQDDREQVHLP--STSWMPRRPSCPLKEPSPQNGNITAQGPSIQPV----------- 114
RLQMQDD E++ P S+SW C N+ AQG +++P+
Sbjct: 67 RLQMQDDNERIRPPPSSSSW---HSGC----------NLGAQGTTLKPLTVPKVQISEVD 113
Query: 115 -----HKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSI 169
+ SSTDS G E+ PQLMRT+SD +RR R P + +RIRRHRFSI
Sbjct: 114 APPEGDQMPSSTDSRGLKPLQEDTPQLMRTRSDVGV--RRRGNVRTPSDQRRIRRHRFSI 171
Query: 170 NGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGE 229
NGHFYNHKTSVFTPAYGSVTNVR+NSTMTT QVL LLLNKF++E+ EFALY+VH SGE
Sbjct: 172 NGHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGE 231
Query: 230 RTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLK 289
+ KLK +YPLI+RIL GPCE+I+++FLME D EV ++VAQYIKFEMPVL SF++KL+
Sbjct: 232 KQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQ 291
Query: 290 EEEEREIIKLTMKFQALRLTMLQRLEQLVE 319
EEE+RE+ KL K+ LRL + QRLE++ E
Sbjct: 292 EEEDREVKKLMRKYTVLRLMIRQRLEEIAE 321
>gi|7661964 Ras association domain family 2 [Homo sapiens]
Length = 326
Score = 350 bits (898), Expect = 1e-96
Identities = 188/330 (56%), Positives = 232/330 (70%), Gaps = 33/330 (10%)
Query: 8 SSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPI 67
+S VP K I K+ELL LKTYN Y+EG++ QLRHREEE I+EGLLNI+WGLRRPI
Sbjct: 7 TSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPI 66
Query: 68 RLQMQDDREQVHLP--STSWMPRRPSCPLKEPSPQNGNITAQGPSIQPV----------- 114
RLQMQDD E++ P S+SW C N+ AQG +++P+
Sbjct: 67 RLQMQDDNERIRPPPSSSSW---HSGC----------NLGAQGTTLKPLTVPKVQISEVD 113
Query: 115 -----HKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSI 169
+ SSTDS G E+ PQLMRT+SD +RR R P + +RIRRHRFSI
Sbjct: 114 APPEGDQMPSSTDSRGLKPLQEDTPQLMRTRSDVGV--RRRGNVRTPSDQRRIRRHRFSI 171
Query: 170 NGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGE 229
NGHFYNHKTSVFTPAYGSVTNVR+NSTMTT QVL LLLNKF++E+ EFALY+VH SGE
Sbjct: 172 NGHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGE 231
Query: 230 RTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLK 289
+ KLK +YPLI+RIL GPCE+I+++FLME D EV ++VAQYIKFEMPVL SF++KL+
Sbjct: 232 KQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQ 291
Query: 290 EEEEREIIKLTMKFQALRLTMLQRLEQLVE 319
EEE+RE+ KL K+ LRL + QRLE++ E
Sbjct: 292 EEEDREVKKLMRKYTVLRLMIRQRLEEIAE 321
>gi|41393610 Ras association (RalGDS/AF-6) domain family 6 isoform b
[Homo sapiens]
Length = 369
Score = 196 bits (499), Expect = 2e-50
Identities = 124/339 (36%), Positives = 197/339 (58%), Gaps = 42/339 (12%)
Query: 9 SHVPISDSKSIQKSELLGLLKTYNCYHEG-KSFQLRHRE-EEGTLIIEGLLNIAWGLRRP 66
S + I++ I + +L LLKTYN ++E K+ + + E E+G LI+EG+L+I WG++RP
Sbjct: 42 SWIFINEKTFITREQLNSLLKTYNIFYENQKNLHILYGETEDGKLIVEGMLDIFWGVKRP 101
Query: 67 IRLQMQDDR--------EQVHLPSTSWMPR--------------RPSCPLKEP-SPQNGN 103
I+L++QD++ + + S+ M R R P+ E + Q
Sbjct: 102 IQLKIQDEKPFSSFTSMKSSDVFSSKGMTRWGEFDDLYRISELDRTQIPMSEKRNSQEDY 161
Query: 104 ITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQR-RPKCRAPGEAQRI 162
++ +++P K E ++P L RT S+A+ + +R +P E Q+
Sbjct: 162 LSYHSNTLKPHAKDEP------------DSPVLYRTMSEAALVRKRMKPLMMDRKERQK- 208
Query: 163 RRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY 222
+R SINGHFYNH+TS+F PA+ S T VRVNS M T +V+ LL KF++E+ P +FAL+
Sbjct: 209 --NRASINGHFYNHETSIFIPAFESETKVRVNSNMRTEEVIKQLLQKFKIENSPQDFALH 266
Query: 223 IVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLD 282
I+ +GE+ +LK + PL+ R+L GP EK ARIFLM+ D E+ +VAQYI F +L+
Sbjct: 267 IIFATGEQRRLKKTDIPLLQRLLQGPSEKNARIFLMDKD-AEEISSDVAQYINFHFSLLE 325
Query: 283 SFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 321
S +++L EEE+REI ++ KF + +L+ L+ + K
Sbjct: 326 SILQRLNEEEKREIQRIVTKFNKEKAIILKCLQNKLVIK 364
>gi|29789443 Ras association (RalGDS/AF-6) domain family 6 isoform a
[Homo sapiens]
Length = 337
Score = 196 bits (499), Expect = 2e-50
Identities = 124/339 (36%), Positives = 197/339 (58%), Gaps = 42/339 (12%)
Query: 9 SHVPISDSKSIQKSELLGLLKTYNCYHEG-KSFQLRHRE-EEGTLIIEGLLNIAWGLRRP 66
S + I++ I + +L LLKTYN ++E K+ + + E E+G LI+EG+L+I WG++RP
Sbjct: 10 SWIFINEKTFITREQLNSLLKTYNIFYENQKNLHILYGETEDGKLIVEGMLDIFWGVKRP 69
Query: 67 IRLQMQDDR--------EQVHLPSTSWMPR--------------RPSCPLKEP-SPQNGN 103
I+L++QD++ + + S+ M R R P+ E + Q
Sbjct: 70 IQLKIQDEKPFSSFTSMKSSDVFSSKGMTRWGEFDDLYRISELDRTQIPMSEKRNSQEDY 129
Query: 104 ITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQR-RPKCRAPGEAQRI 162
++ +++P K E ++P L RT S+A+ + +R +P E Q+
Sbjct: 130 LSYHSNTLKPHAKDEP------------DSPVLYRTMSEAALVRKRMKPLMMDRKERQK- 176
Query: 163 RRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY 222
+R SINGHFYNH+TS+F PA+ S T VRVNS M T +V+ LL KF++E+ P +FAL+
Sbjct: 177 --NRASINGHFYNHETSIFIPAFESETKVRVNSNMRTEEVIKQLLQKFKIENSPQDFALH 234
Query: 223 IVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLD 282
I+ +GE+ +LK + PL+ R+L GP EK ARIFLM+ D E+ +VAQYI F +L+
Sbjct: 235 IIFATGEQRRLKKTDIPLLQRLLQGPSEKNARIFLMDKD-AEEISSDVAQYINFHFSLLE 293
Query: 283 SFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 321
S +++L EEE+REI ++ KF + +L+ L+ + K
Sbjct: 294 SILQRLNEEEKREIQRIVTKFNKEKAIILKCLQNKLVIK 332
>gi|30039698 Ras association (RalGDS/AF-6) domain family member 3
[Homo sapiens]
Length = 238
Score = 63.9 bits (154), Expect = 2e-10
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 186 GSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY-IVHESGE--RTKLKDCEYPLIS 242
G + + ++ST T +V+ LL KF V + P++FALY H + KL D E+PL
Sbjct: 108 GCMNTLHISSTNTVGEVIEALLKKFLVTESPAKFALYKRCHREDQVYACKLSDREHPLYL 167
Query: 243 RILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMK 302
R++ GP L E HE+ ++ F +P L +F+ L +EE+ ++ L +
Sbjct: 168 RLVAGPRTDTLSFVLRE--------HEIGEWEAFSLPELQNFLRILDKEEDEQLQNLKRR 219
Query: 303 FQALRLTMLQRLEQL 317
+ A R + + L ++
Sbjct: 220 YTAYRQKLEEALREV 234
>gi|25777684 Ras association domain family 1 isoform D [Homo
sapiens]
Length = 344
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 154 RAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVE 213
R PG +RR +TS + P +V ++ V S +V+ LL KF V
Sbjct: 194 RGPGRGTSVRR------------RTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVV 240
Query: 214 DGPSEFALYIVHESGER------TKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVP 267
D P +FAL+ E ER KL D E PL R+L GP +K L E D G
Sbjct: 241 DDPRKFALF---ERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSG---- 293
Query: 268 HEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEA 320
+ F MP L +F+ L+ EEE + ++ K+ R Q++++ + A
Sbjct: 294 --EVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCR----QKIQEALHA 340
>gi|25777682 Ras association domain family 1 isoform C [Homo
sapiens]
Length = 270
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 154 RAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVE 213
R PG +RR +TS + P +V ++ V S +V+ LL KF V
Sbjct: 120 RGPGRGTSVRR------------RTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVV 166
Query: 214 DGPSEFALYIVHESGER------TKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVP 267
D P +FAL+ E ER KL D E PL R+L GP +K L E D G
Sbjct: 167 DDPRKFALF---ERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSG---- 219
Query: 268 HEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEA 320
+ F MP L +F+ L+ EEE + ++ K+ R Q++++ + A
Sbjct: 220 --EVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCR----QKIQEALHA 266
>gi|20149588 Ras association domain family 1 isoform A [Homo
sapiens]
Length = 340
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 154 RAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVE 213
R PG +RR +TS + P +V ++ V S +V+ LL KF V
Sbjct: 190 RGPGRGTSVRR------------RTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVV 236
Query: 214 DGPSEFALYIVHESGER------TKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVP 267
D P +FAL+ E ER KL D E PL R+L GP +K L E D G
Sbjct: 237 DDPRKFALF---ERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSG---- 289
Query: 268 HEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEA 320
+ F MP L +F+ L+ EEE + ++ K+ R Q++++ + A
Sbjct: 290 --EVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCR----QKIQEALHA 336
>gi|25777680 Ras association domain family 1 isoform B [Homo
sapiens]
Length = 189
Score = 62.0 bits (149), Expect = 7e-10
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 154 RAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVE 213
R PG +RR +TS + P +V ++ V S +V+ LL KF V
Sbjct: 39 RGPGRGTSVRR------------RTSFYLPK-DAVKHLHVLSRTRAREVIEALLRKFLVV 85
Query: 214 DGPSEFALYIVHESGER------TKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVP 267
D P +FAL+ E ER KL D E PL R+L GP +K L E D G
Sbjct: 86 DDPRKFALF---ERAERHGQVYLRKLLDDEQPLRLRLLAGPSDKALSFVLKENDSG---- 138
Query: 268 HEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEA 320
+ F MP L +F+ L+ EEE + ++ K+ R Q++++ + A
Sbjct: 139 --EVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCR----QKIQEALHA 185
>gi|32996735 Ras association (RalGDS/AF-6) domain family 5 isoform C
[Homo sapiens]
Length = 265
Score = 60.8 bits (146), Expect = 2e-09
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 177 KTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY-IVHESGE--RTKL 233
+TS + P ++ + ++ST T +V+ LL KF V D P +FAL+ +H+ G+ KL
Sbjct: 124 RTSFYLPL-DAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKL 182
Query: 234 KDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEE 293
+ PL R+L GP ++ L E + G ++ F +P L +F+ L++EE+
Sbjct: 183 SIADRPLYLRLLAGPDTEVLSFVLKENETG------EVEWDAFSIPELQNFLTILEKEEQ 236
Query: 294 REIIKLTMKFQALRLTMLQRLEQ 316
+I ++ K+ R Q+LE+
Sbjct: 237 DKIQQVQKKYDKFR----QKLEE 255
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
[Homo sapiens]
Length = 418
Score = 60.8 bits (146), Expect = 2e-09
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 177 KTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY-IVHESGE--RTKL 233
+TS + P ++ + ++ST T +V+ LL KF V D P +FAL+ +H+ G+ KL
Sbjct: 277 RTSFYLPL-DAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKL 335
Query: 234 KDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEE 293
+ PL R+L GP ++ L E + G ++ F +P L +F+ L++EE+
Sbjct: 336 SIADRPLYLRLLAGPDTEVLSFVLKENETG------EVEWDAFSIPELQNFLTILEKEEQ 389
Query: 294 REIIKLTMKFQALRLTMLQRLEQ 316
+I ++ K+ R Q+LE+
Sbjct: 390 DKIQQVQKKYDKFR----QKLEE 408
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 191 VRVNSTMTTLQVLTLLLNKFRVED---GPSEFALYIVHESGERTKLKDCEYPLISRILHG 247
+RV+ST TT V+ L KFR + +++LY VH SGER +L E PL+ ++
Sbjct: 60 IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGER-RLDIDEKPLVVQLNWN 118
Query: 248 PCEKIARIFLMEADLGVEVPHEVAQYIKFEMP-VLDSFVEKLKEEEEREIIKLTMKFQAL 306
++ R L + + + K E V+ +F L ++E++E K + +AL
Sbjct: 119 KDDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKE--KKKREKEAL 176
Query: 307 R 307
R
Sbjct: 177 R 177
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 37.7 bits (86), Expect = 0.014
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 191 VRVNSTMTTLQVLTLLLNKFRVED---GPSEFALYIVHESGERTKLKDCEYPLISRILHG 247
+RV+ST TT V+ L KFR + +++LY VH SGER +L E PL+ ++
Sbjct: 60 IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGER-RLDIDEKPLVVQLNWN 118
Query: 248 PCEKIARIFLMEADLGVEVPHEVAQYIKFEMP----VLDSFVEKLKEEEEREIIKLTMKF 303
++ R L + +P + AQ E V+ +F L ++E++E K +
Sbjct: 119 KDDREGRFVLKNEN--DAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKE--KKKREK 174
Query: 304 QALR 307
+ALR
Sbjct: 175 EALR 178
>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 3 [Homo
sapiens]
Length = 1612
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 191 VRVNSTMTTLQVLTLLLNKFRVED---GPSEFALYIVHESGERTKLKDCEYPLISRILHG 247
+RV+ST TT V+ L KFR + +++LY VH SGER +L E PL+ ++
Sbjct: 60 IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGER-RLDIDEKPLVVQLNWN 118
Query: 248 PCEKIARIFLMEADLGVEVPHEVAQYIKFEMP-VLDSFVEKLKEEEEREIIKLTMKFQAL 306
++ R L + + + K E V+ +F L ++E++E K + +AL
Sbjct: 119 KDDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKE--KKKREKEAL 176
Query: 307 R 307
R
Sbjct: 177 R 177
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
[Homo sapiens]
Length = 336
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 177 KTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALY-IVHESGE 229
+TS + P ++ + ++ST T +V+ LL KF V D P +FAL+ +H+ G+
Sbjct: 277 RTSFYLPL-DAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQ 329
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 35.0 bits (79), Expect = 0.089
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 76 EQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQ 135
+ H P + PRRP P P+P++G + G A S+ +S P E + +P
Sbjct: 43 DATHPPPPARSPRRPGAPSLSPAPRSGELGLPG--------APESSTASAPGEPSPPSPP 94
Query: 136 LMRTKSDASCMSQRR 150
R D S+ R
Sbjct: 95 CRRPGPDCRAKSRGR 109
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 34.3 bits (77), Expect = 0.15
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 90 PSCPLKEPSPQNGNITA---QGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCM 146
PS +KEPS Q T+ + P +P+ + + + +E E+ + R +S +
Sbjct: 226 PSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK--EKTRPRSRSRSK 283
Query: 147 SQRRPKCRAPGEAQRIRRHR 166
S+ R + R+P + RRHR
Sbjct: 284 SRSRTRSRSPSHTRPRRRHR 303
>gi|18104959 thioredoxin domain containing 9 [Homo sapiens]
Length = 226
Score = 32.7 bits (73), Expect = 0.44
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 258 MEADLGVEV-----PHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMK-FQALRLTML 311
MEAD V++ H++ Q K LDS ++KL + +E E+ +L K QALR
Sbjct: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
Query: 312 QRLEQL 317
Q+ E L
Sbjct: 61 QKQEWL 66
>gi|119943093 glycogenin 2 isoform a [Homo sapiens]
Length = 470
Score = 32.3 bits (72), Expect = 0.58
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 48 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPRRPSC-PLKEPSPQNGNITA 106
E T I++ L++ G R + + P T P +C PL +PSPQ + T
Sbjct: 327 EPTQIVDETLSLPEGRR---------SEDMIACPETE-TPAVITCDPLSQPSPQPADFTE 376
Query: 107 QGPSIQPVHKAESSTDSSGPLEEAEEAP 134
+QP +K E S S E ++E P
Sbjct: 377 TETILQPANKVE-SVSSEETFEPSQELP 403
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 32.3 bits (72), Expect = 0.58
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 48 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPRRPSC-PLKEPSPQNGNITA 106
E T I++ L++ G R + + P T P +C PL +PSPQ + T
Sbjct: 358 EPTQIVDETLSLPEGRR---------SEDMIACPETE-TPAVITCDPLSQPSPQPADFTE 407
Query: 107 QGPSIQPVHKAESSTDSSGPLEEAEEAP 134
+QP +K E S S E ++E P
Sbjct: 408 TETILQPANKVE-SVSSEETFEPSQELP 434
>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
Length = 1103
Score = 32.0 bits (71), Expect = 0.76
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 40 FQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSP 99
F+LR R++ +IE + A ++ Q Q + P T P PS + +P
Sbjct: 940 FKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQV-LQSTQSPRTKNAPSLPSRTCYKTAP 998
Query: 100 QNGNI---------TAQGPSIQPVHKAESSTDSSGP-------LEEAEEAPQLMRTKSDA 143
G I T +GPS+QP E + + P +E+ E R + D
Sbjct: 999 --GKIEKVKPPPSPTTEGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYETHKSKRRERMDD 1056
Query: 144 SCMSQRRPKCRAPG---EAQRIRRHRFSI 169
S + + C+ EA R+ R + ++
Sbjct: 1057 SSYTSKLLSCKVTSEVLEATRVNRRKSAL 1085
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 32.0 bits (71), Expect = 0.76
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 80 LPSTSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPL--EEAEEAPQLM 137
+P +P+ S P +E S + ++ +GPS+ +E T GPL +E + P
Sbjct: 50 IPRQGSLPQTSSAPKQETSGRMPHVLQKGPSLLCSAASEQETSLQGPLASQEGTQYPPPA 109
Query: 138 RTKSDASCMSQRRPKCRAP 156
+ + S +S AP
Sbjct: 110 AAEQEVSLLSHSPHHQEAP 128
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 31.6 bits (70), Expect = 0.99
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 83 TSWMPRRPSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSD 142
T+ P +PS P + P+P+ AQ S + GP E E+ P +
Sbjct: 3733 TATTPAKPSFPSRSPAPERLPARAQAKSC-----------TKGPREAGEQGPHGSLGPKE 3781
Query: 143 ASCMSQRRPKCRAPGEAQ 160
S +R K + PG A+
Sbjct: 3782 KGESSTKRKKGQVPGPAR 3799
>gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens]
Length = 734
Score = 31.6 bits (70), Expect = 0.99
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 47 EEGTLIIEGLLNIAWGLRRPIRLQMQDDR---EQVHLPSTSWMPRRPSCPLKEPSPQNGN 103
EE +++GL G RR + +Q+Q E++ S +P P EP P+
Sbjct: 113 EEAAALVDGLRREPGGPRRWVTVQVQGQEVLSEKMEPSSFQPLPETEP-PTPEPGPKTPP 171
Query: 104 ITAQGP--SIQPVHKAESSTDS----SGPLEEAEEAPQLMRTKSDASC---MSQRRPKCR 154
T Q +Q ++E + DS SGPL +E+ + + C + Q P +
Sbjct: 172 RTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFPHSK 231
Query: 155 APGEAQRIRRHRFSINGHFYNHKTSVFTPAY 185
E R H ++ ++ +F+P +
Sbjct: 232 TGPEGPSWREHPRAL---WHEEAGGIFSPGF 259
>gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens]
Length = 734
Score = 31.6 bits (70), Expect = 0.99
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 47 EEGTLIIEGLLNIAWGLRRPIRLQMQDDR---EQVHLPSTSWMPRRPSCPLKEPSPQNGN 103
EE +++GL G RR + +Q+Q E++ S +P P EP P+
Sbjct: 113 EEAAALVDGLRREPGGPRRWVTVQVQGQEVLSEKMEPSSFQPLPETEP-PTPEPGPKTPP 171
Query: 104 ITAQGP--SIQPVHKAESSTDS----SGPLEEAEEAPQLMRTKSDASC---MSQRRPKCR 154
T Q +Q ++E + DS SGPL +E+ + + C + Q P +
Sbjct: 172 RTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFPHSK 231
Query: 155 APGEAQRIRRHRFSINGHFYNHKTSVFTPAY 185
E R H ++ ++ +F+P +
Sbjct: 232 TGPEGPSWREHPRAL---WHEEAGGIFSPGF 259
>gi|169214072 PREDICTED: zinc finger and SCAN domain containing 5C
[Homo sapiens]
Length = 495
Score = 31.2 bits (69), Expect = 1.3
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 71 MQDDREQVHLPSTSWMPRRPSCPL-------KEPSPQNG--NITAQGPSIQPVHKAESST 121
+++DRE+ + TS P+ P+ P KEP + N+ A PS V + E+ST
Sbjct: 225 LEEDREE-NPGLTSPEPQLPNSPSVVGAKEGKEPKKRASVENVDADTPSACVVER-EAST 282
Query: 122 DSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRA--------PGEAQ 160
S G +A L R+K DA+ +SQ P+ A PG+A+
Sbjct: 283 HS-GSRGDALNLRGLKRSKPDATSISQEEPQGEATPVGNRESPGQAE 328
>gi|169214427 PREDICTED: zinc finger and SCAN domain containing 5C
[Homo sapiens]
Length = 495
Score = 31.2 bits (69), Expect = 1.3
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 71 MQDDREQVHLPSTSWMPRRPSCPL-------KEPSPQNG--NITAQGPSIQPVHKAESST 121
+++DRE+ + TS P+ P+ P KEP + N+ A PS V + E+ST
Sbjct: 225 LEEDREE-NPGLTSPEPQLPNSPSVVGAKEGKEPKKRASVENVDADTPSACVVER-EAST 282
Query: 122 DSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRA--------PGEAQ 160
S G +A L R+K DA+ +SQ P+ A PG+A+
Sbjct: 283 HS-GSRGDALNLRGLKRSKPDATSISQEEPQGEATPVGNRESPGQAE 328
>gi|169213343 PREDICTED: zinc finger and SCAN domain containing 5C
[Homo sapiens]
Length = 496
Score = 31.2 bits (69), Expect = 1.3
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 71 MQDDREQVHLPSTSWMPRRPSCPL--------KEPSPQNG--NITAQGPSIQPVHKAESS 120
+++DRE+ + TS P+ P+ P KEP + N+ A PS V + E+S
Sbjct: 225 LEEDREE-NPGLTSPEPQLPNSPTGVVGAKEGKEPQKRASVENVDADTPSACVVER-EAS 282
Query: 121 TDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRA--------PGEAQ 160
T S G +A L R+K DA+ +SQ P+ A PG+A+
Sbjct: 283 THS-GSRGDALNLRGLKRSKPDATSISQEEPQGEATPVGNRESPGQAE 329
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 30.8 bits (68), Expect = 1.7
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 22/106 (20%)
Query: 72 QDDREQVHLPSTSWMPRRP----------SCPLKEPSPQNGNITAQGPSIQPVHKAESST 121
+D EQ+ P S PR P S P + P N AQGP P + SS
Sbjct: 1135 EDSAEQLSSPMPSATPREPENHFVGGAEASAPGEAGRPLNSTSKAQGPESSPAVPSASS- 1193
Query: 122 DSSGP-----------LEEAEEAPQLMRTKSDASCMSQRRPKCRAP 156
++GP L+ + + + A SQ+ PK AP
Sbjct: 1194 GTAGPGNYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPKGEAP 1239
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,749,367
Number of Sequences: 37866
Number of extensions: 600196
Number of successful extensions: 2517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 2437
Number of HSP's gapped (non-prelim): 122
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.