Guide to the Human Genome
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Name: MIPOL1 Sequence: fasta or formatted (442aa) NCBI GI: 23503325
Description:

mirror-image polydactyly 1

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         32           2
 C cysteine            1.4          6           1
 D aspartate           3.8         17           2
 E glutamate          13.6         60           3
 F phenylalanine       1.1          5           1
 G glycine             1.4          6           1
 H histidine           2.5         11           2
 I isoleucine          5.2         23           2
 K lysine              9.0         40           2
 L leucine             9.7         43           2
 M methionine          3.6         16           1
 N asparagine          6.3         28           2
 P proline             1.1          5           1
 Q glutamine           7.9         35           3
 R arginine            5.4         24           1
 S serine              5.7         25           2
 T threonine           7.5         33           2
 V valine              4.3         19           1
 W tryptophan          0.5          2           1
 Y tyrosine            2.7         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mirror-image polydactyly 1 
MYH9                  0.049   myosin, heavy polypeptide 9, non-muscle 
TPM4                  0.047   tropomyosin 4 isoform 1 
MYH11                 0.047   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.047   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.047   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.047   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CENPF                 0.047   centromere protein F 
CCDC150               0.047   coiled-coil domain containing 150 
KTN1                  0.047   kinectin 1 isoform b 
KTN1                  0.047   kinectin 1 isoform a 
KTN1                  0.047   kinectin 1 isoform c 
KTN1                  0.047   kinectin 1 isoform a 
TPM1                  0.047   tropomyosin 1 alpha chain isoform 3 
GOLGB1                0.047   golgi autoantigen, golgin subfamily b, macrogolgin ...
TPM3                  0.047   tropomyosin 3 isoform 1 
TPM4                  0.045   tropomyosin 4 isoform 2 
TPM3                  0.045   tropomyosin 3 isoform 5 
CCDC88A               0.045   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.045   coiled-coil domain containing 88A isoform 1 
TPM2                  0.044   tropomyosin 2 (beta) isoform 1 
MYH10                 0.044   myosin, heavy polypeptide 10, non-muscle 
PLEC1                 0.044   plectin 1 isoform 11 
PLEC1                 0.044   plectin 1 isoform 10 
PLEC1                 0.044   plectin 1 isoform 8 
PLEC1                 0.044   plectin 1 isoform 7 
PLEC1                 0.044   plectin 1 isoform 6 
PLEC1                 0.044   plectin 1 isoform 3 
PLEC1                 0.044   plectin 1 isoform 2 
PLEC1                 0.044   plectin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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