CDC16 2127

Name: CDC16	Sequence: fasta or formatted (620aa)		NCBI GI: 118402578
Description: anaphase-promoting complex, subunit 6		Referenced in: Anaphase-promoting Complex Additional Cell Cycle Functions Tetratricopeptide Domains
Other entries for this name: alt mRNA [620aa] anaphase-promoting complex, subunit 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 50 2 C cysteine 2.3 14 1 D aspartate 5.6 35 2 E glutamate 9.0 56 2 F phenylalanine 4.0 25 2 G glycine 3.5 22 1 H histidine 3.7 23 2 I isoleucine 3.5 22 2 K lysine 7.1 44 2 L leucine 11.9 74 2 M methionine 3.1 19 2 N asparagine 3.7 23 2 P proline 3.4 21 2 Q glutamine 3.4 21 3 R arginine 4.0 25 2 S serine 6.9 43 2 T threonine 4.7 29 2 V valine 4.8 30 3 W tryptophan 1.5 9 1 Y tyrosine 5.6 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 anaphase-promoting complex, subunit 6 CDC16 1.000 anaphase-promoting complex, subunit 6 CDC27 0.044 cell division cycle protein 27 isoform 1 CDC27 0.044 cell division cycle protein 27 isoform 2 CDC23 0.030 cell division cycle protein 23 OGT 0.028 O-linked GlcNAc transferase isoform 2 OGT 0.028 O-linked GlcNAc transferase isoform 1 TMTC1 0.019 transmembrane and tetratricopeptide repeat containin... CTR9 0.018 SH2 domain binding protein 1 TMTC4 0.015 transmembrane and tetratricopeptide repeat containi... TMTC4 0.015 transmembrane and tetratricopeptide repeat containi... NPHP3 0.013 nephrocystin 3 IFT88 0.012 intraflagellar transport 88 homolog isoform 1 IFT88 0.012 intraflagellar transport 88 homolog isoform 2 TTC28 0.012 tetratricopeptide repeat domain 28 TTC18 0.010 tetratricopeptide repeat domain 18 IFIT1 0.010 interferon-induced protein with tetratricopeptide r... BBS4 0.010 Bardet-Biedl syndrome 4 TMTC2 0.010 transmembrane and tetratricopeptide repeat containin... TTC7A 0.010 tetratricopeptide repeat domain 7A GPSM1 0.010 G-protein signaling modulator 1 (AGS3-like, C. eleg... GPSM1 0.010 G-protein signaling modulator 1 (AGS3-like, C. eleg... KLC4 0.008 kinesin-like 8 isoform b KLC4 0.008 kinesin-like 8 isoform a KLC4 0.008 kinesin-like 8 isoform a TTC7B 0.008 tetratricopeptide repeat domain 7B TTC8 0.007 tetratricopeptide repeat domain 8 isoform A TTC8 0.007 tetratricopeptide repeat domain 8 isoform C TTC8 0.007 tetratricopeptide repeat domain 8 isoform B SMG7 0.007 SMG-7 homolog isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.