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Search of human proteins with 22749517
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749517 t-complex 11 (mouse) like 2 [Homo sapiens]
(519 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749517 t-complex 11 (mouse) like 2 [Homo sapiens] 1018 0.0
gi|224493895 t-complex 11 (mouse) like 1 [Homo sapiens] 404 e-112
gi|224493847 t-complex 11 (mouse) like 1 [Homo sapiens] 404 e-112
gi|148226214 t-complex 11 isoform 1 [Homo sapiens] 340 2e-93
gi|8924256 t-complex 11 isoform 2 [Homo sapiens] 322 4e-88
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 39 0.015
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.13
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 35 0.13
gi|40538736 RAN binding protein 10 [Homo sapiens] 35 0.17
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 34 0.28
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 34 0.28
gi|46249349 homer 2 isoform 1 [Homo sapiens] 34 0.28
gi|55741677 SET domain containing 1A [Homo sapiens] 34 0.37
gi|7705415 hook homolog 1 [Homo sapiens] 34 0.37
gi|194394161 leucine rich repeat containing 57 [Homo sapiens] 34 0.37
gi|65301141 PH domain and leucine rich repeat protein phosphatas... 33 0.48
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.48
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 33 0.63
gi|45269141 multimerin 1 [Homo sapiens] 33 0.82
gi|95113664 leucine rich repeat containing 1 [Homo sapiens] 33 0.82
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 32 1.1
gi|110349794 homer 2 isoform 3 [Homo sapiens] 32 1.1
gi|93102375 hypothetical protein LOC10827 [Homo sapiens] 32 1.1
gi|37221175 PH domain and leucine rich repeat protein phosphatas... 32 1.4
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 1.4
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 1.4
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 32 1.4
gi|148664238 a disintegrin and metalloprotease domain 32 [Homo s... 32 1.4
gi|56711286 hypothetical protein LOC340533 [Homo sapiens] 32 1.8
gi|70906430 adaptor-related protein complex 2, sigma 1 subunit i... 32 1.8
>gi|22749517 t-complex 11 (mouse) like 2 [Homo sapiens]
Length = 519
Score = 1018 bits (2633), Expect = 0.0
Identities = 519/519 (100%), Positives = 519/519 (100%)
Query: 1 MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVV 60
MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVV
Sbjct: 1 MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVV 60
Query: 61 TFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSELN 120
TFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSELN
Sbjct: 61 TFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSELN 120
Query: 121 ADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLAN 180
ADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLAN
Sbjct: 121 ADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLAN 180
Query: 181 YVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQRQ 240
YVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQRQ
Sbjct: 181 YVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQRQ 240
Query: 241 LVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLV 300
LVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLV
Sbjct: 241 LVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLV 300
Query: 301 LNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGL 360
LNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGL
Sbjct: 301 LNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGL 360
Query: 361 PELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANL 420
PELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANL
Sbjct: 361 PELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANL 420
Query: 421 IGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQY 480
IGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQY
Sbjct: 421 IGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQY 480
Query: 481 ANIVNLNKQVYGPFYANILRKLLFNEEAMGKVDASPPTN 519
ANIVNLNKQVYGPFYANILRKLLFNEEAMGKVDASPPTN
Sbjct: 481 ANIVNLNKQVYGPFYANILRKLLFNEEAMGKVDASPPTN 519
>gi|224493895 t-complex 11 (mouse) like 1 [Homo sapiens]
Length = 509
Score = 404 bits (1037), Expect = e-112
Identities = 224/507 (44%), Positives = 316/507 (62%), Gaps = 5/507 (0%)
Query: 1 MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSS-SPASTSPPRV 59
M N +K V E S S+ S A E +++ SDSSS +SPPR
Sbjct: 1 MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60
Query: 60 VTFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSEL 119
VT +E++ TAR ++N+ LAHEI VN +FQ+K LPE SL RVK IVH+AFWD L +L
Sbjct: 61 VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120
Query: 120 NADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLA 179
+ DPP ++HAIKL EI+E LLSFL PG RLRNQI EVLD DLI+Q+AE+ A+DI LA
Sbjct: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
Query: 180 NYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQR 239
++I MG LCAP RD ++++LK IV + R+IF VLDLM++DMANF I S+RPHL +
Sbjct: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240
Query: 240 QLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPG---AENTSKPSLS 296
Q VEYER KFQEILE P++LD T+W++E+ + + + AL G A + P LS
Sbjct: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300
Query: 297 PTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAI 356
P V N +YLKLL+WD+ ++ PET++ D +R EL +L QL I+ + L+T +M
Sbjct: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360
Query: 357 TGGLPELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEI 416
+ A +L I +LL M+ +F+LK+VL +IG + C+EV+ L G +
Sbjct: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420
Query: 417 QANLIGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEAL 476
+ L GQ ++ D+PI +++ RI ++ L QK +P +PGGL+ +Q+ELE +
Sbjct: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLA-SGHQKPLPTVPGGLSPVQRELEEV 479
Query: 477 GSQYANIVNLNKQVYGPFYANILRKLL 503
++A +VN NK V+ P+Y IL K+L
Sbjct: 480 AIKFARLVNYNKMVFCPYYDAILSKIL 506
>gi|224493847 t-complex 11 (mouse) like 1 [Homo sapiens]
Length = 509
Score = 404 bits (1037), Expect = e-112
Identities = 224/507 (44%), Positives = 316/507 (62%), Gaps = 5/507 (0%)
Query: 1 MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSS-SPASTSPPRV 59
M N +K V E S S+ S A E +++ SDSSS +SPPR
Sbjct: 1 MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRF 60
Query: 60 VTFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSEL 119
VT +E++ TAR ++N+ LAHEI VN +FQ+K LPE SL RVK IVH+AFWD L +L
Sbjct: 61 VTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQL 120
Query: 120 NADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLA 179
+ DPP ++HAIKL EI+E LLSFL PG RLRNQI EVLD DLI+Q+AE+ A+DI LA
Sbjct: 121 SEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLA 180
Query: 180 NYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQR 239
++I MG LCAP RD ++++LK IV + R+IF VLDLM++DMANF I S+RPHL +
Sbjct: 181 EFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQ 240
Query: 240 QLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPG---AENTSKPSLS 296
Q VEYER KFQEILE P++LD T+W++E+ + + + AL G A + P LS
Sbjct: 241 QSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLS 300
Query: 297 PTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAI 356
P V N +YLKLL+WD+ ++ PET++ D +R EL +L QL I+ + L+T +M
Sbjct: 301 PVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPG 360
Query: 357 TGGLPELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEI 416
+ A +L I +LL M+ +F+LK+VL +IG + C+EV+ L G +
Sbjct: 361 ISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDK 420
Query: 417 QANLIGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEAL 476
+ L GQ ++ D+PI +++ RI ++ L QK +P +PGGL+ +Q+ELE +
Sbjct: 421 ETVLKGQIQAVASPDDPIRRIMESRILTFLETYLA-SGHQKPLPTVPGGLSPVQRELEEV 479
Query: 477 GSQYANIVNLNKQVYGPFYANILRKLL 503
++A +VN NK V+ P+Y IL K+L
Sbjct: 480 AIKFARLVNYNKMVFCPYYDAILSKIL 506
>gi|148226214 t-complex 11 isoform 1 [Homo sapiens]
Length = 516
Score = 340 bits (871), Expect = 2e-93
Identities = 187/490 (38%), Positives = 303/490 (61%), Gaps = 25/490 (5%)
Query: 40 FASDSSSKSSSPASTSPPRV--------VTFDEVMATARNLSNLT-LAHEIAVNENFQLK 90
+ DS +S P ++ PP+ F V ++ ++ L+++I +N ++ ++
Sbjct: 25 YPGDSEGRSCKPETSGPPQEDKSGSEDPPPFLSVTGLTETVNEVSKLSNKIGMNCDYYME 84
Query: 91 QEALPEKSLAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSFLTPGGNR 150
++ LP SL G+VK VH AFWD L +L+A PP+F A++L +EI+EILLS L P NR
Sbjct: 85 EKVLPPSSLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNR 144
Query: 151 LRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDNDIRELKATGNIVEV 210
LR +I E LD DL++Q+AEH A+ + L+ YV++ M LCAPVRD +++L+ + V +
Sbjct: 145 LRIEIEEALDMDLLKQEAEHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWL 204
Query: 211 LRQIFHVLDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSALDQTTEWIKES 270
LR IF VL M+MDM N+TI SL+PHLQ ++YER KFQE+L + PS L+ TT+W+ ++
Sbjct: 205 LRGIFQVLGRMKMDMVNYTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQA 264
Query: 271 VNEELFS------LSESALTPG-----AENTSKPSLSPTLVLNNSYLKLLQWDYQKKELP 319
+ S S+S+ G A N +P LSPT+VL +L LL WD + +E P
Sbjct: 265 AGDLTMSPPTCPDTSDSSSVAGPSPNEAANNPEP-LSPTMVLCQGFLNLLLWDLENEEFP 323
Query: 320 ETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMN 379
ETL+ D RLQEL +L+QL ++A + L+ ++ G++ G P+ +L RI+ LLE +
Sbjct: 324 ETLLMDRTRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKRITKSLLEDFH 383
Query: 380 KETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANLIGQFSSIEEEDNPIWSLID 439
+E + ++ Q E++++L GL L+++ A+L+GQ +I +++N + S+ID
Sbjct: 384 SRP---EEAILTVSEQVSQEIHQSLKNMGLVALSSDNTASLMGQLQNIAKKENCVCSVID 440
Query: 440 KRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQYANIVNLNKQVYGPFYANIL 499
+RI L+++ L L Q+ + +PGGL +I+ EL LG ++ N+ + N+QV+GP+Y IL
Sbjct: 441 QRIHLFLKCCLVL-GVQRSLLDLPGGLTLIEAELAELGQKFVNLTHHNQQVFGPYYTEIL 499
Query: 500 RKLLFNEEAM 509
+ L+ +A+
Sbjct: 500 KTLISPAQAL 509
>gi|8924256 t-complex 11 isoform 2 [Homo sapiens]
Length = 441
Score = 322 bits (826), Expect = 4e-88
Identities = 174/423 (41%), Positives = 271/423 (64%), Gaps = 16/423 (3%)
Query: 98 SLAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICE 157
SL G+VK VH AFWD L +L+A PP+F A++L +EI+EILLS L P NRLR +I E
Sbjct: 17 SLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEE 76
Query: 158 VLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHV 217
LD DL++Q+AEH A+ + L+ YV++ M LCAPVRD +++L+ + V +LR IF V
Sbjct: 77 ALDMDLLKQEAEHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQV 136
Query: 218 LDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFS 277
L M+MDM N+TI SL+PHLQ ++YER KFQE+L + PS L+ TT+W+ ++ + S
Sbjct: 137 LGRMKMDMVNYTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGDLTMS 196
Query: 278 ------LSESALTPG-----AENTSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDG 326
S+S+ G A N +P LSPT+VL +L LL WD + +E PETL+ D
Sbjct: 197 PPTCPDTSDSSSVAGPSPNEAANNPEP-LSPTMVLCQGFLNLLLWDLENEEFPETLLMDR 255
Query: 327 ARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMNKETFNLK 386
RLQEL +L+QL ++A + L+ ++ G++ G P+ +L RI+ LLE + +
Sbjct: 256 TRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKRITKSLLEDFHSRP---E 312
Query: 387 EVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANLIGQFSSIEEEDNPIWSLIDKRIKLYM 446
E + ++ Q E++++L GL L+++ A+L+GQ +I +++N + S+ID+RI L++
Sbjct: 313 EAILTVSEQVSQEIHQSLKNMGLVALSSDNTASLMGQLQNIAKKENCVCSVIDQRIHLFL 372
Query: 447 RRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQYANIVNLNKQVYGPFYANILRKLLFNE 506
+ L L Q+ + +PGGL +I+ EL LG ++ N+ + N+QV+GP+Y IL+ L+
Sbjct: 373 KCCLVL-GVQRSLLDLPGGLTLIEAELAELGQKFVNLTHHNQQVFGPYYTEILKTLISPA 431
Query: 507 EAM 509
+A+
Sbjct: 432 QAL 434
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 38.5 bits (88), Expect = 0.015
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 14 QPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATARNLS 73
+P+ S S S S +S SD S S +SDSS SSS + SP R V V A L
Sbjct: 264 RPTRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQL- 322
Query: 74 NLTLAHEIAVNENFQLKQEALPEKS 98
L+ + ++F +K + LP +S
Sbjct: 323 -LSSLEKDEPRKSFGIKVQNLPVRS 346
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.4 bits (80), Expect = 0.13
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 18 SDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATA 69
+ SS S S +S S S S +S SS +SP ++SPPRV+ V A A
Sbjct: 84 ASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAAA 135
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 35.4 bits (80), Expect = 0.13
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 18 SDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATA 69
+ SS S S +S S S S +S SS +SP ++SPPRV+ V A A
Sbjct: 84 ASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELPGVPAAA 135
>gi|40538736 RAN binding protein 10 [Homo sapiens]
Length = 620
Score = 35.0 bits (79), Expect = 0.17
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 2 PFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVT 61
P + G D PS S+ ++S + S Y S +S SSS SSSP+S V
Sbjct: 374 PSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSS------VN 427
Query: 62 FDEVMAT--ARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAF 111
+ E +T ++ + + +++ + +++ E P L IV+ A+
Sbjct: 428 YSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAY 479
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 34.3 bits (77), Expect = 0.28
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 198 IRELKATGNIVE--VLRQIFHVLDLMQ----MDMANFTIMSLRPHLQRQLVEYERTKFQE 251
++E K +VE +L ++ H+ + + +D SL LQ +L E E+ KF E
Sbjct: 1246 LKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQE-EKAKFLE 1304
Query: 252 ILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLVLNNSYLKLLQW 311
LEE ++ + ++ S+ E + + LT E K ++ L ++ +Q
Sbjct: 1305 QLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLT--REKMRKENIINDL--SDKLKSTMQQ 1360
Query: 312 DYQKKELPETLMTDGARLQELTEKLNQ 338
+ K+L E+L D ARL E +KL +
Sbjct: 1361 QERDKDLIESLSEDRARLLEEKKKLEE 1387
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 34.3 bits (77), Expect = 0.28
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 198 IRELKATGNIVE--VLRQIFHVLDLMQ----MDMANFTIMSLRPHLQRQLVEYERTKFQE 251
++E K +VE +L ++ H+ + + +D SL LQ +L E E+ KF E
Sbjct: 1246 LKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQE-EKAKFLE 1304
Query: 252 ILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLVLNNSYLKLLQW 311
LEE ++ + ++ S+ E + + LT E K ++ L ++ +Q
Sbjct: 1305 QLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLT--REKMRKENIINDL--SDKLKSTMQQ 1360
Query: 312 DYQKKELPETLMTDGARLQELTEKLNQ 338
+ K+L E+L D ARL E +KL +
Sbjct: 1361 QERDKDLIESLSEDRARLLEEKKKLEE 1387
>gi|46249349 homer 2 isoform 1 [Homo sapiens]
Length = 343
Score = 34.3 bits (77), Expect = 0.28
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 229 TIMSLRPHLQRQLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSL-----SESAL 283
T+ L ++QL ++ KFQE+ E A D+T E I+ S N S E A
Sbjct: 84 TVFGLGFSSEQQLTKFAE-KFQEVKEAAKIAKDKTQEKIETSSNHSQASSVNGTDDEKAS 142
Query: 284 TPGAENTSKPSLSPTL--VLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLK 340
G NT S + L L S + +W+ + + L E+ LQE + Q K
Sbjct: 143 HAGPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEQWK 201
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.9 bits (76), Expect = 0.37
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 11 GEDQPSDSDS--SRFSESMA---SLSDYECSRQSFASDSSSKSSSPASTS 55
GED+ SDS S S +++S S SD E S S +S SSS SSS +S+S
Sbjct: 1006 GEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSS 1055
Score = 30.8 bits (68), Expect = 3.1
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 15/60 (25%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSS------------PASTSPPRVV 60
D SDS+SS S S +S S S S +S SSS+SSS P+++ PPR V
Sbjct: 1028 DSTSDSESSSSSSSSSSSSS---SSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREV 1084
Score = 29.6 bits (65), Expect = 7.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPAS 53
D ++DS+ SES +S S S S +S SSS SS +S
Sbjct: 1022 DSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSS 1062
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 33.9 bits (76), Expect = 0.37
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 86 NFQLKQEALPE-KSLAGRVKHIVHQAFWDVLDSELNADPP-----EFEHAIK-LFEEIRE 138
N + KQE + +L V+H+V A +++ E+ + PP E E +K EE++E
Sbjct: 130 NCEKKQEHIQNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAVGELEQQLKRALEELQE 189
Query: 139 ILLSFLTPGGNRLRNQICEVLDTDLIRQQAE-HSAVDIQGLANYVISTM-GKLCAPVRDN 196
L LR Q CE LD + Q E +S V + N + + G P
Sbjct: 190 ALAE-----KEELR-QRCEELDMQVTTLQDEKNSLVSENEMMNEKLDQLDGSFDDP---- 239
Query: 197 DIRELKATGNIVEVLRQIFHV-LDLMQMDMANFTIMSLR-------PHLQRQLVEYE--R 246
N V V ++ FH L L Q+ NF + + + L++QL+E++
Sbjct: 240 ---------NTV-VAKKYFHAQLQLEQLQEENFRLEAAKDDYRVHCEELEKQLIEFQHRN 289
Query: 247 TKFQEILEETPSALDQ 262
+ + EET + D+
Sbjct: 290 DELTSLAEETRALKDE 305
>gi|194394161 leucine rich repeat containing 57 [Homo sapiens]
Length = 239
Score = 33.9 bits (76), Expect = 0.37
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 274 ELFSLSESALTPGAENTSKPSLSPTLV----------LNNSYLKLLQWDYQKKELPETLM 323
+L L+ + T N SL P L+ LNN+ L +L + + ETL
Sbjct: 32 DLQKLTSNLRTIDLSNNKIESLPPLLIGKFTLLKSLSLNNNKLTVLPDEICNLKKLETLS 91
Query: 324 TDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMNKETF 383
+ L+EL QL + LSL + N +GA+ P+L S L+ M+
Sbjct: 92 LNNNHLRELPSTFGQLSALKTLSL-SGNQLGALP---PQLCSLRH------LDVMDLSKN 141
Query: 384 NLKEVLNSIGIQTCVEVN 401
++ + +S+G +E+N
Sbjct: 142 QIRSIPDSVGELQVIELN 159
>gi|65301141 PH domain and leucine rich repeat protein
phosphatase-like [Homo sapiens]
Length = 1323
Score = 33.5 bits (75), Expect = 0.48
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 320 ETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMN 379
+TL DG L L E+L L+ ++ L + NN +PE+ +LT + V++ G
Sbjct: 348 QTLCLDGNFLTTLPEELGNLQQLSSLGISFNNF-----SQIPEVYEKLTMLDRVVMAGNC 402
Query: 380 KETFNL 385
E NL
Sbjct: 403 LEVLNL 408
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.5 bits (75), Expect = 0.48
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 2 PFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSP 56
P +++ S S SS S S +S S S S +S SSS SSSP+ P
Sbjct: 2600 PAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
Score = 32.7 bits (73), Expect = 0.82
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPP 57
S S SS S S +S S S S +S SSS SSS +S+S P
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP 2649
Score = 32.7 bits (73), Expect = 0.82
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPR 58
S S SS S S +S S S S +S SSS SSS +S SP +
Sbjct: 2611 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653
Score = 31.6 bits (70), Expect = 1.8
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSP 56
S S SS S S +S S S S +S SSS S SPA P
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP 2656
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPP 57
S S SS S S +S S S S +S SSS SSS +S+ P
Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 2651
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 2 PFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
P K+ V E +P + ++ +S S S S +S SSS SSS +S+S
Sbjct: 2582 PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635
Score = 30.0 bits (66), Expect = 5.3
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPP 57
S S SS S S +S S S S +S SSS SSS S + P
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 33.1 bits (74), Expect = 0.63
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDE 64
S S SS S S +S S S S +S SSS SSS +S+S T DE
Sbjct: 2627 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDE 2675
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 15 PSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
P+ S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2652
Score = 31.2 bits (69), Expect = 2.4
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 2 PFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
P + S S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2665
Score = 31.2 bits (69), Expect = 2.4
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATA 69
S S SS S S +S S S S +S SSS SSS ++T + D+ A A
Sbjct: 2635 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPA 2688
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 5 GEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
G + C + S +S S S +S S S S +S SSS SSS +S+S
Sbjct: 2598 GGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Score = 30.8 bits (68), Expect = 3.1
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDE 64
S S SS S S +S S S S +S SSS SSS +S+S T ++
Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDED 2676
Score = 29.6 bits (65), Expect = 7.0
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 4 NGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
NG+ C + + SSR + +S S S S +S SSS SSS +S+S
Sbjct: 2590 NGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 32.7 bits (73), Expect = 0.82
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 41/217 (18%)
Query: 151 LRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDNDIRELKATGNIVEV 210
L+++ VL D++R+Q + D+Q + T+ L + K ++V +
Sbjct: 378 LKSKSINVLIRDIVREQFKIFQNDMQETVAQLFKTVSSLSEDLESTRQIIQKVNESVVSI 437
Query: 211 LRQIFHVLDLMQMDMANFT-IMSLRPHLQR-------------QLVEYERTKFQEILEET 256
Q V L+Q + T I+ LR H+ + +E ++T + LE+
Sbjct: 438 AAQQKFV--LVQENRPTLTDIVELRNHIVNVRQEMTLTCEKPIKELEVKQTHLEGALEQE 495
Query: 257 PS-------ALDQTTEWIKESVNEELFS---LSESALTPGAENTSKPSLSPTLVLNN--S 304
S +L++T +KE V+E+L S +S+ P AE+ S NN
Sbjct: 496 HSRSILYYESLNKTLSKLKE-VHEQLLSTEQVSDQKNAPAAESVS----------NNVTE 544
Query: 305 YLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKI 341
Y+ L + +K+ L M + +QE K+N L +
Sbjct: 545 YMSTLHENIKKQSLMMLQMFEDLHIQE--SKINNLTV 579
>gi|95113664 leucine rich repeat containing 1 [Homo sapiens]
Length = 524
Score = 32.7 bits (73), Expect = 0.82
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 209 EVLRQIFHVLDLMQMDMANFTIMSLRPHLQR--QLVEYE--RTKFQEILEE--------- 255
E+ Q F ++ L ++ +++ I L P + QLVE + R + EI E
Sbjct: 50 ELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQV 109
Query: 256 ---TPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLVLNNSYL------ 306
+ + L + E E N S+++ +L EN +L L + L
Sbjct: 110 ADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDS 169
Query: 307 -----KLLQWDYQKKE---LPET---------LMTDGARLQELTEKLNQLKIIACLSLIT 349
+L + D E LPE+ L DG +L EL +++ LK + CL +
Sbjct: 170 LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSE 229
Query: 350 NNMVGAITGGLPELASRLTRISAVLLEGMNKET 382
N + LPE S LT ++ +++ ET
Sbjct: 230 NRL-----ERLPEEISGLTSLTDLVISQNLLET 257
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D SDSS S+S S E S S +SDSS+ S S +S S
Sbjct: 866 DSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDS 908
Score = 31.6 bits (70), Expect = 1.8
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D S SDSS S+S S S S +SDSS SS +S S
Sbjct: 676 DSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDS 718
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPR 58
SDSDSS S+S S + S S +SDSS S S S R
Sbjct: 816 SDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR 858
Score = 30.4 bits (67), Expect = 4.1
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 11 GEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
G+ SDSDSS S S SD S S +SDS+S S S +S S
Sbjct: 545 GKSDSSDSDSSDSSNS----SDSSDSSDSDSSDSNSSSDSDSSDS 585
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D SDSS +ES S + S S +SDSS S S STS
Sbjct: 1221 DSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTS 1263
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D + SDSS S S S + + S S +SDS S +SS +S S
Sbjct: 787 DSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNS 829
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
SDSDSS S+S S + S S +SDSS S S S++
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSN 890
Score = 30.0 bits (66), Expect = 5.3
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 4 NGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
N D + SDSS S+S S + + S S +SDS S SS +S S
Sbjct: 863 NSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDS 914
Score = 29.6 bits (65), Expect = 7.0
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D SDSS S+S S SD S +S +SDS SKS S S S
Sbjct: 606 DSSDSSDSSDSSDSSDSKSDSSKS-ESDSSDSDSKSDSSDSNS 647
Score = 29.6 bits (65), Expect = 7.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 6 EKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
E D SDS S S+S + + S S +SDSS S S S+S
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSS 679
Score = 29.6 bits (65), Expect = 7.0
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D SDSS SES S SD S S +SDSS+ +SS + +S
Sbjct: 688 DSSDSSDSSNSSESSDS-SDSSDSDSSDSSDSSNSNSSDSDSS 729
Score = 29.6 bits (65), Expect = 7.0
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 16 SDSDSSRFSESM-ASLSDYECSRQSFASDSSSKSSSPAST 54
SDSDSS S+S ++ SD + S S +SDSS+ S S S+
Sbjct: 708 SDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 747
Score = 29.6 bits (65), Expect = 7.0
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 4 NGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
N D + SDSS S+S S S S +SDSS +SS +S S
Sbjct: 928 NSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDS 979
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 13 DQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
D + SDSS SES S + S S +SDSS S S S++
Sbjct: 1137 DSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSN 1179
>gi|110349794 homer 2 isoform 3 [Homo sapiens]
Length = 288
Score = 32.3 bits (72), Expect = 1.1
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 229 TIMSLRPHLQRQLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSL-----SESAL 283
T+ L ++QL ++ KFQE+ E A D+T E I+ S N S E A
Sbjct: 84 TVFGLGFSSEQQLTKFAE-KFQEVKEAAKIAKDKTQEKIETSSNHSQASSVNGTDDEKAS 142
Query: 284 TPGAENTSKPSLSPTL--VLNNSYLKLLQWDYQKKELPETLMTDGARLQ-ELTEKLNQLK 340
G NT S + L L S + ++KE L L+ EL EK +LK
Sbjct: 143 HAGPANTHLKSENDKLKIALTQSAANVKNEINREKEKNTQLKRRIEELEAELREKETELK 202
Query: 341 IIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEV 400
+ S I +P+L S +S LE ++ NL++ + S ++T +E
Sbjct: 203 DLRKQSEI-----------IPQLMSECEYVSE-KLEAAERDNQNLEDKVRS--LKTDIEE 248
Query: 401 NK 402
+K
Sbjct: 249 SK 250
>gi|93102375 hypothetical protein LOC10827 [Homo sapiens]
Length = 505
Score = 32.3 bits (72), Expect = 1.1
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 254 EETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLVLN----NSYLKLL 309
E+ A + EWI++S+ + L E AENT + + + ++ S +L
Sbjct: 327 EKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELT 386
Query: 310 QWDYQKKELPETLMTDGARLQELT-----EKLNQLKIIAC--LSLITNNMVGAI-TGGLP 361
+ L+ G R QE+T + L+Q+ I+ C LS ++ + T G+
Sbjct: 387 ACSIELFHKTAALVLHG-RKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTTCLTTAGVK 445
Query: 362 ELASRLT-RISAVLLEGMNKETF 383
E+A L I+AV LE N ++
Sbjct: 446 EMADVLNPLITAVFLEASNSASY 468
>gi|37221175 PH domain and leucine rich repeat protein phosphatase
[Homo sapiens]
Length = 1205
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 320 ETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMN 379
+T + DG LQ L +L +K ++ L L N +PE+ +LT + + + G
Sbjct: 228 QTFLLDGNFLQSLPAELENMKQLSYLGLSFNEFTD-----IPEVLEKLTAVDKLCMSGNC 282
Query: 380 KETFNLK 386
ET L+
Sbjct: 283 VETLRLQ 289
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.0 bits (71), Expect = 1.4
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 218 LDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSALDQ---TTEWIKESVNEE 274
++ Q D+ NFT S HL +L + + F + + S +D+ +E ++E+++
Sbjct: 2142 MNYKQKDLDNFT--SKGKHLLSELKKIHSSDFSLVKTDMESTVDKWLDVSEKLEENMDRL 2199
Query: 275 LFSLS--ESALTP-----GAENTSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGA 327
SLS + L+ G N P ++ + +++L+ + KE +
Sbjct: 2200 RVSLSIWDDVLSTRDEIEGWSNNCVPQMAENISNLDNHLRA---EELLKEFESEVKNKAL 2256
Query: 328 RLQELTEKLNQLKIIACLSLITNNMVGAITGGLP---ELASRLTRISAVLLEGMNKETFN 384
RL+EL K+N LK + +L T + I L E A +T ++ L+ ++
Sbjct: 2257 RLEELHSKVNDLKELT-KNLETPPDLQFIEADLMQKLEHAKEITEVAKGTLKDFTAQSTQ 2315
Query: 385 LKEVLNSI 392
+++ +N I
Sbjct: 2316 VEKFINDI 2323
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.0 bits (71), Expect = 1.4
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 218 LDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSALDQ---TTEWIKESVNEE 274
++ Q D+ NFT S HL +L + + F + + S +D+ +E ++E+++
Sbjct: 2135 MNYKQKDLDNFT--SKGKHLLSELKKIHSSDFSLVKTDMESTVDKWLDVSEKLEENMDRL 2192
Query: 275 LFSLS--ESALTP-----GAENTSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGA 327
SLS + L+ G N P ++ + +++L+ + KE +
Sbjct: 2193 RVSLSIWDDVLSTRDEIEGWSNNCVPQMAENISNLDNHLRA---EELLKEFESEVKNKAL 2249
Query: 328 RLQELTEKLNQLKIIACLSLITNNMVGAITGGLP---ELASRLTRISAVLLEGMNKETFN 384
RL+EL K+N LK + +L T + I L E A +T ++ L+ ++
Sbjct: 2250 RLEELHSKVNDLKELT-KNLETPPDLQFIEADLMQKLEHAKEITEVAKGTLKDFTAQSTQ 2308
Query: 385 LKEVLNSI 392
+++ +N I
Sbjct: 2309 VEKFINDI 2316
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S S SS S S +S S S S +S SSS SSS +STS
Sbjct: 153 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTS 192
Score = 31.2 bits (69), Expect = 2.4
Identities = 20/42 (47%), Positives = 22/42 (52%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPP 57
S S SS S S +S S S S +S SSS SSS S S P
Sbjct: 155 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKP 196
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 149 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 188
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 150 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 189
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 151 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 190
Score = 30.0 bits (66), Expect = 5.3
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 18 SDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDE 64
S SS S S +S S S S +S SSS SSS +S+S +F +
Sbjct: 149 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSK 195
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVV 60
S S SS S S +S S S S +S SSS SSS + + P +++
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLM 200
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
+ S SS S S +S S S S +S SSS SSS +S+S
Sbjct: 148 TSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S S SS S S +S S S S +S SSS SSS +S++
Sbjct: 152 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 191
>gi|148664238 a disintegrin and metalloprotease domain 32 [Homo
sapiens]
Length = 787
Score = 32.0 bits (71), Expect = 1.4
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 16 SDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTS 55
S+S S +++ AS S E S Q++AS + S+SSS A TS
Sbjct: 720 SESKSEGSTQTYASQSSSEGSTQTYASQTRSESSSQADTS 759
>gi|56711286 hypothetical protein LOC340533 [Homo sapiens]
Length = 1516
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 440 KRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQYANIVNLNKQV 490
K +Y R LL LPS + CM P L +I+ A S N ++L +
Sbjct: 55 KETLMYPRGLLPLPSKKPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGI 105
>gi|70906430 adaptor-related protein complex 2, sigma 1 subunit
isoform AP17 [Homo sapiens]
Length = 142
Score = 31.6 bits (70), Expect = 1.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 189 LCAPVRDNDIRELKATGNIVEVLRQIFH 216
+C V DN++ L+A N VEVL + FH
Sbjct: 69 ICVDVNDNNLAYLEAIHNFVEVLNEYFH 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,527,686
Number of Sequences: 37866
Number of extensions: 828375
Number of successful extensions: 4088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 3667
Number of HSP's gapped (non-prelim): 306
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.