Guide to the Human Genome
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Name: TCP11L2 Sequence: fasta or formatted (519aa) NCBI GI: 22749517
Description:

t-complex 11 (mouse) like 2

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         34           1
 C cysteine            1.5          8           1
 D aspartate           4.2         22           1
 E glutamate           9.2         48           3
 F phenylalanine       3.3         17           1
 G glycine             4.2         22           2
 H histidine           1.3          7           1
 I isoleucine          6.0         31           2
 K lysine              4.8         25           2
 L leucine            12.9         67           2
 M methionine          3.1         16           1
 N asparagine          6.2         32           2
 P proline             5.2         27           2
 Q glutamine           5.4         28           2
 R arginine            4.4         23           2
 S serine              8.7         45           3
 T threonine           5.2         27           2
 V valine              5.2         27           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   t-complex 11 (mouse) like 2 
TCP11L1               0.382   t-complex 11 (mouse) like 1 
TCP11L1               0.382   t-complex 11 (mouse) like 1 
TCP11                 0.317   t-complex 11 isoform 1 
TCP11                 0.299   t-complex 11 isoform 2 
SPEN                  0.014   spen homolog, transcriptional regulator 
ZBTB4                 0.010   zinc finger and BTB domain containing 4 
ZBTB4                 0.010   zinc finger and BTB domain containing 4 
RANBP10               0.010   RAN binding protein 10 
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
HOMER2                0.009   homer 2 isoform 1 
SETD1A                0.009   SET domain containing 1A 
HOOK1                 0.009   hook homolog 1 
LRRC57                0.009   leucine rich repeat containing 57 
PHLPP2                0.008   PH domain and leucine rich repeat protein phosphatas...
SRRM2                 0.008   splicing coactivator subunit SRm300 
TNRC18                0.008   trinucleotide repeat containing 18 
MMRN1                 0.008   multimerin 1 
LRRC1                 0.008   leucine rich repeat containing 1 
DSPP                  0.007   dentin sialophosphoprotein preproprotein 
HOMER2                0.007   homer 2 isoform 3 
FAM114A2              0.007   hypothetical protein LOC10827 
PHLPP1                0.007   PH domain and leucine rich repeat protein phosphatas...
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isof...
MLLT3                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithor...
ADAM32                0.007   a disintegrin and metalloprotease domain 32 
KIAA2022              0.007   hypothetical protein LOC340533 
AP2S1                 0.007   adaptor-related protein complex 2, sigma 1 subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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