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Search of human proteins with 22748957
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748957 interleukin 34 [Homo sapiens]
(242 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748957 interleukin 34 [Homo sapiens] 501 e-142
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 42 5e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 42 5e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 42 5e-04
gi|50428940 mediator complex subunit 25 [Homo sapiens] 33 0.22
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 33 0.29
gi|146134388 YLP motif containing 1 [Homo sapiens] 32 0.38
gi|210032580 SET domain containing 1B [Homo sapiens] 32 0.65
gi|58082087 late cornified envelope-like proline-rich 1 [Homo sa... 32 0.65
gi|24497513 homeobox A3 isoform a [Homo sapiens] 31 0.85
gi|13562112 homeobox A3 isoform a [Homo sapiens] 31 0.85
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 31 0.85
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 31 0.85
gi|153792074 proline rich 12 [Homo sapiens] 31 0.85
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 31 1.1
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 31 1.1
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 31 1.1
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 31 1.1
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 31 1.1
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 31 1.1
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 31 1.1
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 31 1.1
gi|40538736 RAN binding protein 10 [Homo sapiens] 31 1.1
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 30 1.4
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 30 1.4
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 30 1.4
gi|6005705 G protein-coupled receptor 182 [Homo sapiens] 30 1.4
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 30 1.4
gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] 30 1.4
gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit prec... 30 1.9
>gi|22748957 interleukin 34 [Homo sapiens]
Length = 242
Score = 501 bits (1291), Expect = e-142
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MPRGFTWLRYLGIFLGVALGNEPLEMWPLTQNEECTVTGFLRDKLQYRSRLQYMKHYFPI 60
MPRGFTWLRYLGIFLGVALGNEPLEMWPLTQNEECTVTGFLRDKLQYRSRLQYMKHYFPI
Sbjct: 1 MPRGFTWLRYLGIFLGVALGNEPLEMWPLTQNEECTVTGFLRDKLQYRSRLQYMKHYFPI 60
Query: 61 NYKISVPYEGVFRIANVTRLQRAQVSERELRYLWVLVSLSATESVQDVLLEGHPSWKYLQ 120
NYKISVPYEGVFRIANVTRLQRAQVSERELRYLWVLVSLSATESVQDVLLEGHPSWKYLQ
Sbjct: 61 NYKISVPYEGVFRIANVTRLQRAQVSERELRYLWVLVSLSATESVQDVLLEGHPSWKYLQ 120
Query: 121 EVQTLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALLDNCFRVMELLYCSCC 180
EVQTLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALLDNCFRVMELLYCSCC
Sbjct: 121 EVQTLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALLDNCFRVMELLYCSCC 180
Query: 181 KQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGL 240
KQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGL
Sbjct: 181 KQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGL 240
Query: 241 LP 242
LP
Sbjct: 241 LP 242
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 177 CSCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
CS +QSSV +C + SPQSC E Q PPPP P PP
Sbjct: 1616 CSMMQQSSVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPP 1663
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 177 CSCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
CS +QSSV +C + SPQSC E Q PPPP P PP
Sbjct: 1616 CSMMQQSSVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPP 1663
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 177 CSCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
CS +QSSV +C + SPQSC E Q PPPP P PP
Sbjct: 1616 CSMMQQSSVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPP 1663
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 33.1 bits (74), Expect = 0.22
Identities = 18/40 (45%), Positives = 20/40 (50%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGLLP 242
P Q A QL P PP +P PP S S+ A G GL P
Sbjct: 319 PFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAP 358
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 32.7 bits (73), Expect = 0.29
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 197 QSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
Q SP P+L ATQ PPPP+ S P T + +P
Sbjct: 3 QHASPAPALTMMATQNVPPPPYQDS--PQMTATAQP 36
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 32.3 bits (72), Expect = 0.38
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 178 SCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVR 231
S S L+ +PS Q+ PS ++ +QL PPP PS+PP + +V+
Sbjct: 210 SSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPP--PSAPPGNKTTVQ 261
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 31.6 bits (70), Expect = 0.65
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTG 228
P P S PEP A+ PP P + PPH+ G
Sbjct: 1288 PRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPG 1322
>gi|58082087 late cornified envelope-like proline-rich 1 [Homo
sapiens]
Length = 98
Score = 31.6 bits (70), Expect = 0.65
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 12/65 (18%)
Query: 162 KALLDNCFRVMELLYCSCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPS 221
K LL CF C K + C SP SC P+P + P PP PS
Sbjct: 37 KKLLQRCFEK-----CPWEKCPAPPKCLPCPSQSPSSCPPQPCTK-------PCPPKCPS 84
Query: 222 SPPHS 226
S PH+
Sbjct: 85 SCPHA 89
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGLL 241
P+PQ P P A T PPPP S S P +++ + P A LL
Sbjct: 100 PAPQPPQPAPQPP-APTPAAPPPPSSASPPQNASNNPTPANAAKSPLL 146
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRPVRAQGEGLL 241
P+PQ P P A T PPPP S S P +++ + P A LL
Sbjct: 100 PAPQPPQPAPQPP-APTPAAPPPPSSASPPQNASNNPTPANAAKSPLL 146
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.2 bits (69), Expect = 0.85
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 189 QDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
++ + P+ P P+L+ T L PPP SP SPP + P
Sbjct: 516 EESPLSPPEESPPSPALE---TPLSPPPEASPLSPPFEESPLSP 556
Score = 28.5 bits (62), Expect = 5.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P SP P A++L PPP SP+SPP P
Sbjct: 675 PEESPTSPPPE----ASRLSPPPEDSPTSPPPEDSPASP 709
Score = 28.1 bits (61), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P SP P A++L PPP SP SPP + P
Sbjct: 612 PEESPLSPPPE----ASRLSPPPEDSPMSPPPEESPMSP 646
Score = 27.7 bits (60), Expect = 9.4
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P SP P A++L PPP SP SPP + P
Sbjct: 558 PEELPTSPPPE----ASRLSPPPEESPMSPPPEESPMSP 592
Score = 27.7 bits (60), Expect = 9.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 195 SPQSCSPEPSL---QYAATQLYPPPPWSPSSPPHSTGSVRP 232
SP S PE S + + L PPP SP SPP + P
Sbjct: 588 SPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSP 628
Score = 27.7 bits (60), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 9/37 (24%)
Query: 197 QSCSPEPSLQYAAT---------QLYPPPPWSPSSPP 224
+S +PEP Q++ T QL PPP PS PP
Sbjct: 4882 ESPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPP 4918
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 31.2 bits (69), Expect = 0.85
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
P+P S S PS +++ PPPP P +PP
Sbjct: 188 PAPSSASSSPSPSPSSSSPSPPPPPPPPAPP 218
Score = 28.5 bits (62), Expect = 5.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 8/31 (25%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
PSP S SP P PPPP +P +PP
Sbjct: 199 PSPSSSSPSPPP--------PPPPPAPPAPP 221
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 31.2 bits (69), Expect = 0.85
Identities = 16/39 (41%), Positives = 17/39 (43%)
Query: 194 PSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P PQ P P A T PPPP P PP + S P
Sbjct: 1476 PPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 1514
Score = 28.1 bits (61), Expect = 7.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 192 EVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPP 224
E+PS + P +Q Q PPPP P PP
Sbjct: 1017 ELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPP 1049
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1738 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1767
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1715 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1744
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1718 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1747
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1698 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1727
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1735 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1764
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1669 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1698
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1740 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1769
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 30.8 bits (68), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 203 PSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
P++ +A L PPPP SP SPP + + P
Sbjct: 1745 PNISPSACPLPPPPPISPPSPPPAPAPLAP 1774
>gi|40538736 RAN binding protein 10 [Homo sapiens]
Length = 620
Score = 30.8 bits (68), Expect = 1.1
Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 31/192 (16%)
Query: 46 QYRSRLQYMKHYFPINYKISVPYEGVFRIANVTRLQRAQVSERELRYLWVLVSLSATESV 105
++R+++Q H FPI+ R+ + + VS + + + + +
Sbjct: 232 EWRAKVQGTVHCFPISA----------RLGEWQAVLQNMVSSYLVHHGYCATATAFARMT 281
Query: 106 QDVLLEGHPSWKYLQEVQTLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVRPKALL 165
+ + E S K Q++Q L+L + G E + L PNL
Sbjct: 282 ETPIQEEQASIKNRQKIQKLVLEGRVG----EAIETTQRFYPGLLEHNPNL--------- 328
Query: 166 DNCFRVMELLYCSCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPH 225
L C + ++N D EV S S SP+ Y + P SS H
Sbjct: 329 --------LFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMH 380
Query: 226 STGSVRPVRAQG 237
+TG+ P + G
Sbjct: 381 NTGADSPSCSNG 392
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 30.4 bits (67), Expect = 1.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 191 CEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
C +P P + P P+ AAT L+P P P+ G+VRP
Sbjct: 1034 CALPGPLALRPAPT---AATTLFPAPILGPALFRTPAGAVRP 1072
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 30.4 bits (67), Expect = 1.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 191 CEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
C +P P + P P+ AAT L+P P P+ G+VRP
Sbjct: 1034 CALPGPLALRPAPT---AATTLFPAPILGPALFRTPAGAVRP 1072
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 30.4 bits (67), Expect = 1.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 191 CEVPSPQSCSPEPSLQYAATQLYPPPPWSPSSPPHSTGSVRP 232
C +P P + P P+ AAT L+P P P+ G+VRP
Sbjct: 1034 CALPGPLALRPAPT---AATTLFPAPILGPALFRTPAGAVRP 1072
>gi|6005705 G protein-coupled receptor 182 [Homo sapiens]
Length = 404
Score = 30.4 bits (67), Expect = 1.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 178 SCCKQSSVLNWQDCEVPSPQSCSPEPSLQYAATQLYP-PPPWSPSSP 223
SC Q S++ + P+ + PEPSL + A L P P SP+ P
Sbjct: 354 SCSTQHSIIITKGDSQPAAAAPHPEPSLSFQAHHLLPNTSPISPTQP 400
>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
Length = 1004
Score = 30.4 bits (67), Expect = 1.4
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 178 SCCKQSSVLNWQDCEVPSPQSCSP---EPSLQYAATQLYPPPPWSPS----SPPHSTGSV 230
S C Q S++ P SC+ +LQ Q PP + S SPP++T +
Sbjct: 611 SSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPLGSPPNATRVL 670
Query: 231 RPVRAQGEGLL 241
P +A G+G+L
Sbjct: 671 TPPQAAGDGIL 681
>gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]
Length = 704
Score = 30.4 bits (67), Expect = 1.4
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 178 SCCKQSSVLNWQDCEVPSPQSCSP---EPSLQYAATQLYPPPPWSPS----SPPHSTGSV 230
S C Q S++ P SC+ +LQ Q PP + S SPP++T +
Sbjct: 611 SSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPLGSPPNATRVL 670
Query: 231 RPVRAQGEGLL 241
P +A G+G+L
Sbjct: 671 TPPQAAGDGIL 681
>gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit
precursor [Homo sapiens]
Length = 627
Score = 30.0 bits (66), Expect = 1.9
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 156 LKLVRPKALLDNCFRVMELLYCSCC----------KQSSVLNWQDCEVPSPQSC------ 199
L + RP + DNC R++E ++ + + Q PSP C
Sbjct: 356 LLMKRPSVVKDNCRRLIESMHKMASAPRFWPEPEGEPPATSGTQSLHPPSPSFCVPLDVP 415
Query: 200 -SPEPSLQYAATQLYPPPPW--SPSSPPHSTGSVRP 232
P PS + + QL P P +SP S G RP
Sbjct: 416 AEPGPSCKSPSDQLPPQQPLEAEKASPHPSPGPCRP 451
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,831,800
Number of Sequences: 37866
Number of extensions: 540838
Number of successful extensions: 4181
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 3887
Number of HSP's gapped (non-prelim): 333
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.