Guide to the Human Genome
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Name: ANKRD9 Sequence: fasta or formatted (317aa) NCBI GI: 22748713
Description:

ankyrin repeat domain 9

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.8         47           3
 C cysteine            1.9          6           2
 D aspartate           4.7         15           1
 E glutamate           5.0         16           2
 F phenylalanine       3.5         11           1
 G glycine            10.1         32           3
 H histidine           2.2          7           1
 I isoleucine          0.9          3           1
 K lysine              1.3          4           1
 L leucine            15.5         49           4
 M methionine          0.9          3           1
 N asparagine          0.3          1           1
 P proline             8.8         28           2
 Q glutamine           3.5         11           1
 R arginine           11.4         36           2
 S serine              5.0         16           2
 T threonine           2.5          8           1
 V valine              3.8         12           1
 W tryptophan          1.6          5           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 9 
PLA2G6                0.034   phospholipase A2, group VI isoform b 
PLA2G6                0.032   phospholipase A2, group VI isoform a 
ANKRD60               0.029   PREDICTED: ankyrin repeat domain 60 
ANKRD60               0.029   PREDICTED: ankyrin repeat domain 60 
ANKRD60               0.029   PREDICTED: ankyrin repeat domain 60 
ANKRD54               0.027   ankyrin repeat domain 54 
HECTD1                0.027   HECT domain containing 1 
RNASEL                0.026   ribonuclease L 
TNKS2                 0.026   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB10                 0.024   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB10                 0.024   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.024   ankyrin repeat and SOCS box-containing 10 isoform 3...
ANKLE1                0.023   ankyrin repeat domain 41 
HACE1                 0.023   HECT domain and ankyrin repeat containing, E3 ubiqu...
LOC441869             0.023   hypothetical protein LOC441869 
ANK2                  0.019   ankyrin 2 isoform 3 
ANK2                  0.019   ankyrin 2 isoform 2 
ANK2                  0.019   ankyrin 2 isoform 1 
ASB16                 0.019   ankyrin repeat and SOCS box-containing protein 16 [H...
ANK3                  0.019   ankyrin 3 isoform 1 
TNKS                  0.019   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB18                 0.019   ankyrin repeat and SOCS box-containing 18 
ESPNL                 0.019   espin-like 
RAI14                 0.018   retinoic acid induced 14 isoform d 
RAI14                 0.018   retinoic acid induced 14 isoform c 
RAI14                 0.018   retinoic acid induced 14 isoform b 
RAI14                 0.018   retinoic acid induced 14 isoform a 
RAI14                 0.018   retinoic acid induced 14 isoform a 
RAI14                 0.018   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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