BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens] (145 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens] 329 4e-91 gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens] 210 3e-55 gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens] 77 5e-15 gi|109150431 ring finger protein 31 [Homo sapiens] 33 0.084 gi|40807465 zinc finger protein 341 [Homo sapiens] 33 0.084 gi|30520320 ring finger protein 166 [Homo sapiens] 31 0.42 gi|13430850 RB-associated KRAB repressor [Homo sapiens] 30 0.55 gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [H... 30 0.71 gi|19923717 deltex 3-like [Homo sapiens] 30 0.93 gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens] 29 1.6 gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens] 29 1.6 gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 29 1.6 gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 29 1.6 gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens] 29 1.6 gi|38045938 ring finger protein 144 [Homo sapiens] 28 2.1 gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens] 28 2.7 gi|9558731 replication protein A4, 34kDa [Homo sapiens] 28 2.7 gi|7662302 TBK1 binding protein 1 [Homo sapiens] 28 2.7 gi|31563503 activity-dependent neuroprotector [Homo sapiens] 28 2.7 gi|12229217 activity-dependent neuroprotector [Homo sapiens] 28 2.7 gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 28 2.7 gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 28 2.7 gi|38045931 ring finger protein 122 [Homo sapiens] 28 2.7 gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 27 4.6 gi|239754287 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6 gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo ... 27 4.6 gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo ... 27 4.6 gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo ... 27 4.6 gi|239740804 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6 gi|239740753 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6 >gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens] Length = 145 Score = 329 bits (844), Expect = 4e-91 Identities = 145/145 (100%), Positives = 145/145 (100%) Query: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60 Query: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120 Query: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145 NFCIQHRHPLDHSCRHGSRPTIKAG Sbjct: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145 >gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens] Length = 257 Score = 210 bits (535), Expect = 3e-55 Identities = 86/145 (59%), Positives = 109/145 (75%) Query: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60 MEFPDLG HCSE +C++LDFLP+KCDAC FC DH YA H C A+QKD+ VPVCPLC Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60 Query: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120 N P+PV +G+ PD VG+HIDRDC S P ++K KIFT +C + GC+++EM+++ C +C Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120 Query: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145 NFCI+HRHPLDH C PT +AG Sbjct: 121 NFCIKHRHPLDHDCSGEGHPTSRAG 145 >gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens] Length = 268 Score = 77.0 bits (188), Expect = 5e-15 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 36/130 (27%) Query: 5 DLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPI 64 D+G+HC + C+Q DFLP CD C FC +H +H CP Sbjct: 5 DIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV----------------- 47 Query: 65 PVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCI 124 V+ + + K ++ +Y CS + C ++E++ ++C C NFC+ Sbjct: 48 ---------TVINERL----------KTDQHTSYPCSFKDCAERELVAVICPYCEKNFCL 88 Query: 125 QHRHPLDHSC 134 +HRH DH C Sbjct: 89 RHRHQSDHEC 98 >gi|109150431 ring finger protein 31 [Homo sapiens] Length = 1072 Score = 33.1 bits (74), Expect = 0.084 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 22/117 (18%) Query: 24 KCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIP------DVVVG 77 +C C F + HF A +K + VCP C P Q+ D+ + Sbjct: 718 ECTICPDCF-RQHFTIALK------EKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLR 770 Query: 78 DHIDRDCDSHPGKKKEK---------IFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQ 125 + ++ D + KK + ++ +CS ++E L+ C QCH FC++ Sbjct: 771 ESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR 827 >gi|40807465 zinc finger protein 341 [Homo sapiens] Length = 847 Score = 33.1 bits (74), Expect = 0.084 Identities = 36/148 (24%), Positives = 52/148 (35%), Gaps = 42/148 (28%) Query: 24 KCDACKQDFCKDHF------------PYAAHKCPFAFQKD--------VHVPV----CPL 59 KC CK+ F ++H+ PY C AF + +H P CP Sbjct: 588 KCQVCKKFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPF 647 Query: 60 CNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQ------- 112 K+ PD + + SH G K K CSK ++ + + Sbjct: 648 STHTGCSKEFNRPDKLKAHIL-----SHSGMKLHKCAL--CSKSFSRRAHLAEHQRAHTG 700 Query: 113 ---MVCAQCHGNFCIQHRHPLDHSCRHG 137 CA C F +H++ DH CR G Sbjct: 701 NYKFRCAGCAKGFS-RHKYLKDHRCRLG 727 >gi|30520320 ring finger protein 166 [Homo sapiens] Length = 237 Score = 30.8 bits (68), Expect = 0.42 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 27/111 (24%) Query: 15 CKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDV 74 C ++ PV +C FC + C V P+CPLC P KK V Sbjct: 36 CLEVYHRPVAIGSCGHTFCGE----CLQPC-----LQVPSPLCPLCRLPFDPKK-----V 81 Query: 75 VVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQ 125 H+++ S Y+ GC KK L + + H + C++ Sbjct: 82 DKATHVEKQLSS-----------YKAPCRGCNKKVTLAKM--RVHISSCLK 119 >gi|13430850 RB-associated KRAB repressor [Homo sapiens] Length = 714 Score = 30.4 bits (67), Expect = 0.55 Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 28/135 (20%) Query: 17 QLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVV 76 Q++ P +C C + FCK + H+ +K VC + +KG + Sbjct: 255 QMEMKPFECSECGKSFCKKS-KFIIHQRAHTGEKPYECNVCGKSFS----QKGTLTV--- 306 Query: 77 GDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMV----------CAQCHGNFCIQH 126 H + P K E C K C+K + Q + C++C FC Q Sbjct: 307 --HRRSHLEEKPYKCNE------CGKTFCQKLHLTQHLRTHSGEKPYECSECGKTFC-QK 357 Query: 127 RHPLDHSCRH-GSRP 140 H H H G RP Sbjct: 358 THLTLHQRNHSGERP 372 >gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [Homo sapiens] Length = 802 Score = 30.0 bits (66), Expect = 0.71 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%) Query: 81 DRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRH-PLDH------- 132 D +CD G ++K + C G K + +Q++C +C+ + I + PLD Sbjct: 328 DPECDLCGGDPEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYW 387 Query: 133 ---SCRHGSRPTIKAG 145 SC+ S +KAG Sbjct: 388 YCPSCKTDSSEVVKAG 403 >gi|19923717 deltex 3-like [Homo sapiens] Length = 740 Score = 29.6 bits (65), Expect = 0.93 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 12/62 (19%) Query: 28 CKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSH 87 CK +FC P + + P+CP C T ++KG P+ + + R DS Sbjct: 577 CKHEFC----------APCINKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSR--DSL 624 Query: 88 PG 89 PG Sbjct: 625 PG 626 >gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens] Length = 804 Score = 28.9 bits (63), Expect = 1.6 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 19/68 (27%) Query: 45 PFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEG 104 P QK++ + V P NTP PV+K K++ +FT R + Sbjct: 286 PSTSQKELRIDVPPTANTPTPVRK-------------------QSKRRSNLFTSRKGSDP 326 Query: 105 CKKKEMLQ 112 K+K+ L+ Sbjct: 327 DKEKKGLE 334 >gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens] Length = 857 Score = 28.9 bits (63), Expect = 1.6 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 19/68 (27%) Query: 45 PFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEG 104 P QK++ + V P NTP PV+K K++ +FT R + Sbjct: 286 PSTSQKELRIDVPPTANTPTPVRK-------------------QSKRRSNLFTSRKGSDP 326 Query: 105 CKKKEMLQ 112 K+K+ L+ Sbjct: 327 DKEKKGLE 334 >gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] Length = 606 Score = 28.9 bits (63), Expect = 1.6 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%) Query: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48 M F D+ KH T ++ P KCD C ++F + PY KC AF Sbjct: 537 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 592 Query: 49 QKDVHVPV 56 + H+ V Sbjct: 593 TQFSHLTV 600 >gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] Length = 629 Score = 28.9 bits (63), Expect = 1.6 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%) Query: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48 M F D+ KH T ++ P KCD C ++F + PY KC AF Sbjct: 560 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 615 Query: 49 QKDVHVPV 56 + H+ V Sbjct: 616 TQFSHLTV 623 >gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens] Length = 557 Score = 28.9 bits (63), Expect = 1.6 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%) Query: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48 M F D+ KH T ++ P KCD C ++F + PY KC AF Sbjct: 488 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 543 Query: 49 QKDVHVPV 56 + H+ V Sbjct: 544 TQFSHLTV 551 >gi|38045938 ring finger protein 144 [Homo sapiens] Length = 292 Score = 28.5 bits (62), Expect = 2.1 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 22/102 (21%) Query: 22 PVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHID 81 PV+C AC+ +FC C ++ P PI G+ Sbjct: 132 PVQCKACRMEFCS--------TCKASWHPGQGCPE----TMPITFLPGE-----TSAAFK 174 Query: 82 RDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFC 123 + D P K+ K Y EGC QM+C C FC Sbjct: 175 MEEDDAPIKRCPKCKVYIERDEGC-----AQMMCKNCKHAFC 211 >gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens] Length = 227 Score = 28.1 bits (61), Expect = 2.7 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 11/76 (14%) Query: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120 N PVK+ ++ + + +R ++ K+K + ++C K E++Q C Sbjct: 126 NEASPVKRPRLLE-----NTERSEETSRSKQKSRRRCFQCQT----KLELVQQELGSCRC 176 Query: 121 N--FCIQHRHPLDHSC 134 FC+ HR P H C Sbjct: 177 GYVFCMLHRLPEQHDC 192 >gi|9558731 replication protein A4, 34kDa [Homo sapiens] Length = 261 Score = 28.1 bits (61), Expect = 2.7 Identities = 15/55 (27%), Positives = 23/55 (41%) Query: 26 DACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHI 80 D ++F +D H+CP K +H LC+ + K I + V HI Sbjct: 194 DESHRNFIQDEVLRLIHECPHQEGKSIHELRAQLCDLSVKAIKEAIDYLTVEGHI 248 >gi|7662302 TBK1 binding protein 1 [Homo sapiens] Length = 615 Score = 28.1 bits (61), Expect = 2.7 Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 41 AHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIP 72 A +CP P CP C +P+P ++ +P Sbjct: 344 APQCPSPSPPARAAPPCPPCQSPVPQRRSPVP 375 >gi|31563503 activity-dependent neuroprotector [Homo sapiens] Length = 1102 Score = 28.1 bits (61), Expect = 2.7 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 48 FQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRC 100 ++KDV +CPLC + KG I D + +R EK TY+C Sbjct: 615 YKKDVGKTLCPLC---FSILKGPISDALAHHLRERHQVIQTVHPVEKKLTYKC 664 >gi|12229217 activity-dependent neuroprotector [Homo sapiens] Length = 1102 Score = 28.1 bits (61), Expect = 2.7 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 48 FQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRC 100 ++KDV +CPLC + KG I D + +R EK TY+C Sbjct: 615 YKKDVGKTLCPLC---FSILKGPISDALAHHLRERHQVIQTVHPVEKKLTYKC 664 >gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] Length = 727 Score = 28.1 bits (61), Expect = 2.7 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 4/47 (8%) Query: 90 KKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRH 136 KKK + C K K + +C NFC HR+ H C + Sbjct: 660 KKKTTNHCFLCGK----KTGLASSYECRCGNNFCASHRYAETHGCTY 702 >gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] Length = 727 Score = 28.1 bits (61), Expect = 2.7 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 4/47 (8%) Query: 90 KKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRH 136 KKK + C K K + +C NFC HR+ H C + Sbjct: 660 KKKTTNHCFLCGK----KTGLASSYECRCGNNFCASHRYAETHGCTY 702 >gi|38045931 ring finger protein 122 [Homo sapiens] Length = 155 Score = 28.1 bits (61), Expect = 2.7 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 16 KQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVP------VCPLCNTPI 64 K+L C C +DF K C AF + V VCP+CN PI Sbjct: 84 KKLQLYGQTCAVCLEDF-KGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137 >gi|223633890 hypothetical protein LOC729956 [Homo sapiens] Length = 538 Score = 27.3 bits (59), Expect = 4.6 Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 115 CAQCHGNFCIQHRH 128 C CH FC +HRH Sbjct: 107 CGTCHYRFCCEHRH 120 >gi|239754287 PREDICTED: hypothetical protein [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 >gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 >gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 >gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 >gi|239740804 PREDICTED: hypothetical protein [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 >gi|239740753 PREDICTED: hypothetical protein [Homo sapiens] Length = 243 Score = 27.3 bits (59), Expect = 4.6 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85 H PV P CN P P +G + ++VG H+ + D Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.141 0.495 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,220,666 Number of Sequences: 37866 Number of extensions: 349367 Number of successful extensions: 1280 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 1251 Number of HSP's gapped (non-prelim): 53 length of query: 145 length of database: 18,247,518 effective HSP length: 92 effective length of query: 53 effective length of database: 14,763,846 effective search space: 782483838 effective search space used: 782483838 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.