Guide to the Human Genome
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Search of human proteins with 226532848

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens]
         (145 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens]           329   4e-91
gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]            210   3e-55
gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens]              77   5e-15
gi|109150431 ring finger protein 31 [Homo sapiens]                     33   0.084
gi|40807465 zinc finger protein 341 [Homo sapiens]                     33   0.084
gi|30520320 ring finger protein 166 [Homo sapiens]                     31   0.42 
gi|13430850 RB-associated KRAB repressor [Homo sapiens]                30   0.55 
gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [H...    30   0.71 
gi|19923717 deltex 3-like [Homo sapiens]                               30   0.93 
gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens]                29   1.6  
gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens]                29   1.6  
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]          29   1.6  
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]          29   1.6  
gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens]          29   1.6  
gi|38045938 ring finger protein 144 [Homo sapiens]                     28   2.1  
gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]              28   2.7  
gi|9558731 replication protein A4, 34kDa [Homo sapiens]                28   2.7  
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       28   2.7  
gi|31563503 activity-dependent neuroprotector [Homo sapiens]           28   2.7  
gi|12229217 activity-dependent neuroprotector [Homo sapiens]           28   2.7  
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]               28   2.7  
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]               28   2.7  
gi|38045931 ring finger protein 122 [Homo sapiens]                     28   2.7  
gi|223633890 hypothetical protein LOC729956 [Homo sapiens]             27   4.6  
gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]            27   4.6  
gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo ...    27   4.6  
gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo ...    27   4.6  
gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo ...    27   4.6  
gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]            27   4.6  
gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]            27   4.6  

>gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens]
          Length = 145

 Score =  329 bits (844), Expect = 4e-91
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60
           MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC
Sbjct: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60

Query: 61  NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
           NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG
Sbjct: 61  NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120

Query: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145
           NFCIQHRHPLDHSCRHGSRPTIKAG
Sbjct: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145


>gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]
          Length = 257

 Score =  210 bits (535), Expect = 3e-55
 Identities = 86/145 (59%), Positives = 109/145 (75%)

Query: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60
           MEFPDLG HCSE +C++LDFLP+KCDAC   FC DH  YA H C  A+QKD+ VPVCPLC
Sbjct: 1   MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60

Query: 61  NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
           N P+PV +G+ PD  VG+HIDRDC S P ++K KIFT +C + GC+++EM+++ C +C  
Sbjct: 61  NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120

Query: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145
           NFCI+HRHPLDH C     PT +AG
Sbjct: 121 NFCIKHRHPLDHDCSGEGHPTSRAG 145


>gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens]
          Length = 268

 Score = 77.0 bits (188), Expect = 5e-15
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 36/130 (27%)

Query: 5   DLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPI 64
           D+G+HC  + C+Q DFLP  CD C   FC +H    +H CP                   
Sbjct: 5   DIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV----------------- 47

Query: 65  PVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCI 124
                     V+ + +          K ++  +Y CS + C ++E++ ++C  C  NFC+
Sbjct: 48  ---------TVINERL----------KTDQHTSYPCSFKDCAERELVAVICPYCEKNFCL 88

Query: 125 QHRHPLDHSC 134
           +HRH  DH C
Sbjct: 89  RHRHQSDHEC 98


>gi|109150431 ring finger protein 31 [Homo sapiens]
          Length = 1072

 Score = 33.1 bits (74), Expect = 0.084
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 22/117 (18%)

Query: 24  KCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIP------DVVVG 77
           +C  C   F + HF  A        +K +   VCP C  P      Q+       D+ + 
Sbjct: 718 ECTICPDCF-RQHFTIALK------EKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLR 770

Query: 78  DHIDRDCDSHPGKKKEK---------IFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQ 125
           + ++ D  +   KK  +         ++  +CS     ++E L+  C QCH  FC++
Sbjct: 771 ESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR 827


>gi|40807465 zinc finger protein 341 [Homo sapiens]
          Length = 847

 Score = 33.1 bits (74), Expect = 0.084
 Identities = 36/148 (24%), Positives = 52/148 (35%), Gaps = 42/148 (28%)

Query: 24  KCDACKQDFCKDHF------------PYAAHKCPFAFQKD--------VHVPV----CPL 59
           KC  CK+ F ++H+            PY    C  AF +         +H P     CP 
Sbjct: 588 KCQVCKKFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPF 647

Query: 60  CNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQ------- 112
                  K+   PD +    +     SH G K  K     CSK   ++  + +       
Sbjct: 648 STHTGCSKEFNRPDKLKAHIL-----SHSGMKLHKCAL--CSKSFSRRAHLAEHQRAHTG 700

Query: 113 ---MVCAQCHGNFCIQHRHPLDHSCRHG 137
                CA C   F  +H++  DH CR G
Sbjct: 701 NYKFRCAGCAKGFS-RHKYLKDHRCRLG 727


>gi|30520320 ring finger protein 166 [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 27/111 (24%)

Query: 15  CKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDV 74
           C ++   PV   +C   FC +        C       V  P+CPLC  P   KK     V
Sbjct: 36  CLEVYHRPVAIGSCGHTFCGE----CLQPC-----LQVPSPLCPLCRLPFDPKK-----V 81

Query: 75  VVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQ 125
               H+++   S           Y+    GC KK  L  +  + H + C++
Sbjct: 82  DKATHVEKQLSS-----------YKAPCRGCNKKVTLAKM--RVHISSCLK 119


>gi|13430850 RB-associated KRAB repressor [Homo sapiens]
          Length = 714

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 28/135 (20%)

Query: 17  QLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVV 76
           Q++  P +C  C + FCK    +  H+     +K     VC    +    +KG +     
Sbjct: 255 QMEMKPFECSECGKSFCKKS-KFIIHQRAHTGEKPYECNVCGKSFS----QKGTLTV--- 306

Query: 77  GDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMV----------CAQCHGNFCIQH 126
             H     +  P K  E      C K  C+K  + Q +          C++C   FC Q 
Sbjct: 307 --HRRSHLEEKPYKCNE------CGKTFCQKLHLTQHLRTHSGEKPYECSECGKTFC-QK 357

Query: 127 RHPLDHSCRH-GSRP 140
            H   H   H G RP
Sbjct: 358 THLTLHQRNHSGERP 372


>gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [Homo
           sapiens]
          Length = 802

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)

Query: 81  DRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRH-PLDH------- 132
           D +CD   G  ++K  +  C   G K +  +Q++C +C+  + I   + PLD        
Sbjct: 328 DPECDLCGGDPEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYW 387

Query: 133 ---SCRHGSRPTIKAG 145
              SC+  S   +KAG
Sbjct: 388 YCPSCKTDSSEVVKAG 403


>gi|19923717 deltex 3-like [Homo sapiens]
          Length = 740

 Score = 29.6 bits (65), Expect = 0.93
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 28  CKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSH 87
           CK +FC           P   +   + P+CP C T   ++KG  P+  +   + R  DS 
Sbjct: 577 CKHEFC----------APCINKAMSYKPICPTCQTSYGIQKGNQPEGSMVFTVSR--DSL 624

Query: 88  PG 89
           PG
Sbjct: 625 PG 626


>gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens]
          Length = 804

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 19/68 (27%)

Query: 45  PFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEG 104
           P   QK++ + V P  NTP PV+K                     K++  +FT R   + 
Sbjct: 286 PSTSQKELRIDVPPTANTPTPVRK-------------------QSKRRSNLFTSRKGSDP 326

Query: 105 CKKKEMLQ 112
            K+K+ L+
Sbjct: 327 DKEKKGLE 334


>gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens]
          Length = 857

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 19/68 (27%)

Query: 45  PFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEG 104
           P   QK++ + V P  NTP PV+K                     K++  +FT R   + 
Sbjct: 286 PSTSQKELRIDVPPTANTPTPVRK-------------------QSKRRSNLFTSRKGSDP 326

Query: 105 CKKKEMLQ 112
            K+K+ L+
Sbjct: 327 DKEKKGLE 334


>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
          Length = 606

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48
           M F D+ KH    T ++    P KCD C ++F +               PY   KC  AF
Sbjct: 537 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 592

Query: 49  QKDVHVPV 56
            +  H+ V
Sbjct: 593 TQFSHLTV 600


>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
          Length = 629

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48
           M F D+ KH    T ++    P KCD C ++F +               PY   KC  AF
Sbjct: 560 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 615

Query: 49  QKDVHVPV 56
            +  H+ V
Sbjct: 616 TQFSHLTV 623


>gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens]
          Length = 557

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKD------------HFPYAAHKCPFAF 48
           M F D+ KH    T ++    P KCD C ++F +               PY   KC  AF
Sbjct: 488 MWFSDITKHKKTHTGEK----PYKCDECGKNFTQSSNLIVHKRIHTGEKPYKCEKCGKAF 543

Query: 49  QKDVHVPV 56
            +  H+ V
Sbjct: 544 TQFSHLTV 551


>gi|38045938 ring finger protein 144 [Homo sapiens]
          Length = 292

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 22/102 (21%)

Query: 22  PVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHID 81
           PV+C AC+ +FC          C  ++      P       PI    G+           
Sbjct: 132 PVQCKACRMEFCS--------TCKASWHPGQGCPE----TMPITFLPGE-----TSAAFK 174

Query: 82  RDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFC 123
            + D  P K+  K   Y    EGC      QM+C  C   FC
Sbjct: 175 MEEDDAPIKRCPKCKVYIERDEGC-----AQMMCKNCKHAFC 211


>gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]
          Length = 227

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 11/76 (14%)

Query: 61  NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
           N   PVK+ ++ +     + +R  ++   K+K +   ++C      K E++Q     C  
Sbjct: 126 NEASPVKRPRLLE-----NTERSEETSRSKQKSRRRCFQCQT----KLELVQQELGSCRC 176

Query: 121 N--FCIQHRHPLDHSC 134
              FC+ HR P  H C
Sbjct: 177 GYVFCMLHRLPEQHDC 192


>gi|9558731 replication protein A4, 34kDa [Homo sapiens]
          Length = 261

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 15/55 (27%), Positives = 23/55 (41%)

Query: 26  DACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHI 80
           D   ++F +D      H+CP    K +H     LC+  +   K  I  + V  HI
Sbjct: 194 DESHRNFIQDEVLRLIHECPHQEGKSIHELRAQLCDLSVKAIKEAIDYLTVEGHI 248


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 41  AHKCPFAFQKDVHVPVCPLCNTPIPVKKGQIP 72
           A +CP         P CP C +P+P ++  +P
Sbjct: 344 APQCPSPSPPARAAPPCPPCQSPVPQRRSPVP 375


>gi|31563503 activity-dependent neuroprotector [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 48  FQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRC 100
           ++KDV   +CPLC     + KG I D +     +R          EK  TY+C
Sbjct: 615 YKKDVGKTLCPLC---FSILKGPISDALAHHLRERHQVIQTVHPVEKKLTYKC 664


>gi|12229217 activity-dependent neuroprotector [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 48  FQKDVHVPVCPLCNTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRC 100
           ++KDV   +CPLC     + KG I D +     +R          EK  TY+C
Sbjct: 615 YKKDVGKTLCPLC---FSILKGPISDALAHHLRERHQVIQTVHPVEKKLTYKC 664


>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
          Length = 727

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 4/47 (8%)

Query: 90  KKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRH 136
           KKK     + C K    K  +      +C  NFC  HR+   H C +
Sbjct: 660 KKKTTNHCFLCGK----KTGLASSYECRCGNNFCASHRYAETHGCTY 702


>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
          Length = 727

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 4/47 (8%)

Query: 90  KKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRH 136
           KKK     + C K    K  +      +C  NFC  HR+   H C +
Sbjct: 660 KKKTTNHCFLCGK----KTGLASSYECRCGNNFCASHRYAETHGCTY 702


>gi|38045931 ring finger protein 122 [Homo sapiens]
          Length = 155

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 16  KQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVP------VCPLCNTPI 64
           K+L      C  C +DF K         C  AF +   V       VCP+CN PI
Sbjct: 84  KKLQLYGQTCAVCLEDF-KGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137


>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
          Length = 538

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 115 CAQCHGNFCIQHRH 128
           C  CH  FC +HRH
Sbjct: 107 CGTCHYRFCCEHRH 120


>gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


>gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo
          sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


>gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo
          sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


>gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo
          sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


>gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


>gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 53 HVPVCPLCNTPIP-VKKGQIPDVVVGDHIDRDCD 85
          H PV P CN P P   +G +  ++VG H+ +  D
Sbjct: 62 HTPVPPPCNIPFPHAARGNV--LIVGSHVLQHLD 93


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.495 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,220,666
Number of Sequences: 37866
Number of extensions: 349367
Number of successful extensions: 1280
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 53
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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