Guide to the Human Genome
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Name: C1S Sequence: fasta or formatted (688aa) NCBI GI: 4502495
Description:

complement component 1, s subcomponent precursor

Referenced in:

Complement

Other entries for this name:
alt mRNA [688aa] complement component 1, s subcomponent precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         37           2
 C cysteine            3.9         27           1
 D aspartate           6.0         41           2
 E glutamate           7.7         53           2
 F phenylalanine       4.7         32           2
 G glycine             8.9         61           4
 H histidine           1.6         11           1
 I isoleucine          4.5         31           2
 K lysine              5.4         37           2
 L leucine             6.0         41           2
 M methionine          1.9         13           1
 N asparagine          4.9         34           2
 P proline             7.1         49           2
 Q glutamine           2.8         19           1
 R arginine            3.8         26           2
 S serine              6.2         43           2
 T threonine           4.8         33           1
 V valine              7.8         54           3
 W tryptophan          2.0         14           1
 Y tyrosine            4.7         32           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, s subcomponent precursor [Hom... 
C1S                   1.000   complement component 1, s subcomponent precursor [Ho...
MASP1                 0.314   mannan-binding lectin serine protease 1 isoform 2 pr...
C1R                   0.312   complement component 1, r subcomponent 
MASP2                 0.306   mannan-binding lectin serine protease 2 isoform 1 pr...
MASP1                 0.290   mannan-binding lectin serine protease 1 isoform 1 pr...
MASP1                 0.178   mannan-binding lectin serine protease 1 isoform 3 [H...
C1RL                  0.107   complement component 1, r subcomponent-like precursor...
HP                    0.098   haptoglobin isoform 1 preproprotein 
HP                    0.097   haptoglobin isoform 2 preproprotein 
HPR                   0.091   haptoglobin-related protein 
MASP2                 0.080   mannan-binding lectin serine protease 2 isoform 2 pr...
TLL2                  0.078   tolloid-like 2 
UNQ9391               0.074   hypothetical protein LOC203074 
F9                    0.073   coagulation factor IX preproprotein 
PROC                  0.073   protein C 
BMP1                  0.072   bone morphogenetic protein 1 isoform 3 precursor [Hom...
HPN                   0.072   hepsin 
HPN                   0.072   hepsin 
F2                    0.070   coagulation factor II preproprotein 
TLL1                  0.070   tolloid-like 1 
TMPRSS11D             0.070   transmembrane protease, serine 11D 
F10                   0.069   coagulation factor X preproprotein 
BMP1                  0.069   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.067   bone morphogenetic protein 1 isoform 2 precursor [Hom...
CTRC                  0.064   chymotrypsin C preproprotein 
CTRB1                 0.064   chymotrypsin B1 
ST14                  0.064   matriptase 
OVCH1                 0.064   ovochymase 1 
CTRB2                 0.063   chymotrypsin B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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