Guide to the Human Genome
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Name: CFB Sequence: fasta or formatted (764aa) NCBI GI: 67782358
Description:

complement factor B preproprotein

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         34           2
 C cysteine            3.1         24           1
 D aspartate           6.0         46           2
 E glutamate           6.3         48           3
 F phenylalanine       2.7         21           1
 G glycine             8.5         65           2
 H histidine           2.4         18           1
 I isoleucine          5.0         38           2
 K lysine              6.9         53           2
 L leucine             7.6         58           2
 M methionine          1.6         12           2
 N asparagine          3.9         30           1
 P proline             5.4         41           2
 Q glutamine           4.7         36           3
 R arginine            5.0         38           2
 S serine              7.3         56           2
 T threonine           5.6         43           3
 V valine              7.5         57           2
 W tryptophan          1.7         13           1
 Y tyrosine            4.3         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement factor B preproprotein 
C2                    0.313   complement component 2 isoform 1 preproprotein [Homo...
C2                    0.241   complement component 2 isoform 2 preproprotein [Hom...
CSMD1                 0.044   CUB and Sushi multiple domains 1 
CSMD3                 0.044   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.044   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.044   CUB and Sushi multiple domains 3 isoform 1 
SVEP1                 0.042   polydom 
C4BPB                 0.040   complement component 4 binding protein, beta chain i...
C4BPB                 0.040   complement component 4 binding protein, beta chain i...
C4BPB                 0.040   complement component 4 binding protein, beta chain i...
C4BPB                 0.040   complement component 4 binding protein, beta chain i...
C4BPB                 0.040   complement component 4 binding protein, beta chain is...
CSMD2                 0.040   CUB and Sushi multiple domains 2 
PROC                  0.035   protein C 
OVCH1                 0.035   ovochymase 1 
F10                   0.034   coagulation factor X preproprotein 
TMPRSS4               0.033   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.033   transmembrane protease, serine 4 isoform 1 
ESSPL                 0.032   epidermis-specific serine protease-like protein [Ho...
SELE                  0.031   selectin E precursor 
CR2                   0.031   complement component (3d/Epstein Barr virus) recepto...
PRSS8                 0.030   prostasin preproprotein 
C4BPA                 0.028   complement component 4 binding protein, alpha chain p...
SELP                  0.028   selectin P precursor 
CD55                  0.027   decay accelerating factor for complement isoform 2 ...
CD55                  0.027   decay accelerating factor for complement isoform 1 p...
TPSG1                 0.027   transmembrane tryptase preproprotein 
TESSP2                0.026   testis serine protease 2 
TSP50                 0.026   testes-specific protease 50 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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