Guide to the Human Genome
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Name: TPSAB1 Sequence: fasta or formatted (275aa) NCBI GI: 13775595
Description:

tryptase alpha/beta 1 precursor

Referenced in:

Neutrophils, Eosinophils, and Basophils
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         21           2
 C cysteine            2.9          8           1
 D aspartate           5.5         15           2
 E glutamate           3.3          9           2
 F phenylalanine       1.5          4           1
 G glycine             8.4         23           2
 H histidine           4.4         12           2
 I isoleucine          4.0         11           2
 K lysine              2.9          8           2
 L leucine            10.2         28           4
 M methionine          1.8          5           1
 N asparagine          2.5          7           1
 P proline             9.5         26           3
 Q glutamine           5.5         15           1
 R arginine            5.1         14           2
 S serine              4.0         11           2
 T threonine           4.0         11           1
 V valine              9.8         27           2
 W tryptophan          3.3          9           1
 Y tyrosine            4.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tryptase alpha/beta 1 precursor 
TPSB2                 0.984   tryptase beta 2 precursor 
TPSD1                 0.729   tryptase delta 1 
TPSG1                 0.368   transmembrane tryptase preproprotein 
PRSS27                0.358   marapsin 
PRSS33                0.340   protease, serine, 33 
PRSS8                 0.317   prostasin preproprotein 
PRSS22                0.313   protease, serine, 22 
PRSS21                0.303   testisin isoform 2 
PRSS21                0.294   testisin isoform 1 
PRSS36                0.283   protease, serine, 36 
TMPRSS13              0.281   transmembrane protease, serine 13 
F11                   0.278   coagulation factor XI precursor 
TMPRSS3               0.278   transmembrane protease, serine 3 isoform 1 
TMPRSS5               0.273   transmembrane protease, serine 5 
TMPRSS6               0.267   transmembrane protease, serine 6 
KLKB1                 0.267   plasma kallikrein B1 precursor 
ESSPL                 0.267   epidermis-specific serine protease-like protein [Ho...
OVCH1                 0.264   ovochymase 1 
PRSS21                0.258   testisin isoform 3 
TMPRSS11D             0.258   transmembrane protease, serine 11D 
LOC100293486          0.258   PREDICTED: similar to hCG2041452 
LOC100291379          0.258   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.258   PREDICTED: hypothetical protein XP_002342392 
CELA2A                0.255   elastase 2A preproprotein 
TESSP1                0.251   testis-specific serine protease 1 
TMPRSS7               0.250   transmembrane protease, serine 7 
CTRB1                 0.248   chymotrypsin B1 
TMPRSS2               0.246   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.246   transmembrane protease, serine 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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