Search of human proteins with 11545859

Search of human proteins with 11545859

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11545859 golgi phosphoprotein 3 [Homo sapiens]
         (298 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11545859 golgi phosphoprotein 3 [Homo sapiens]                     593   e-170
gi|21361716 Golgi phosphoprotein 3-like [Homo sapiens]                388   e-108
gi|109150407 kelch-like 6 [Homo sapiens]                               37   0.027
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]    33   0.23 
gi|40806173 spastic paraplegia 7 isoform 2 [Homo sapiens]              33   0.30 
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]               33   0.30 
gi|4758646 kinesin family member 3B [Homo sapiens]                     33   0.40 
gi|24497589 aristaless related homeobox [Homo sapiens]                 32   0.68 
gi|55956788 nucleolin [Homo sapiens]                                   32   0.88 
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]      32   0.88 
gi|33620763 sno, strawberry notch homolog 1 [Homo sapiens]             32   0.88 
gi|221316624 dystonin isoform 4 [Homo sapiens]                         31   1.5  
gi|221316622 dystonin isoform 3 [Homo sapiens]                         31   1.5  
gi|221316618 dystonin isoform 2 [Homo sapiens]                         31   1.5  
gi|34577047 dystonin isoform 1 [Homo sapiens]                          31   1.5  
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              31   1.5  
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]               30   2.6  
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       30   2.6  
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform...    30   2.6  
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform...    30   2.6  
gi|5031977 nicotinamide phosphoribosyltransferase precursor [Hom...    30   3.4  
gi|4757900 calreticulin precursor [Homo sapiens]                       30   3.4  
gi|7661622 hypothetical protein LOC25906 [Homo sapiens]                30   3.4  
gi|75677351 suppressor of defective silencing 3 [Homo sapiens]         29   4.4  
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]                       29   4.4  
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]                       29   4.4  
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]                       29   4.4  
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]                       29   4.4  
gi|14150005 zinc and ring finger protein 1 [Homo sapiens]              29   4.4  
gi|54607116 leiomodin 3 (fetal) [Homo sapiens]                         29   4.4  

>gi|11545859 golgi phosphoprotein 3 [Homo sapiens]
          Length = 298

 Score =  593 bits (1528), Expect = e-170
 Identities = 298/298 (100%), Positives = 298/298 (100%)

Query: 1   MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRL 60
           MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRL
Sbjct: 1   MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRL 60

Query: 61  TLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKV 120
           TLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKV
Sbjct: 61  TLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKV 120

Query: 121 ICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKN 180
           ICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKN
Sbjct: 121 ICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKN 180

Query: 181 LVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALI 240
           LVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALI
Sbjct: 181 LVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALI 240

Query: 241 YLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298
           YLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK
Sbjct: 241 YLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298


>gi|21361716 Golgi phosphoprotein 3-like [Homo sapiens]
          Length = 285

 Score =  388 bits (997), Expect = e-108
 Identities = 195/298 (65%), Positives = 238/298 (79%), Gaps = 14/298 (4%)

Query: 1   MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRL 60
           MT+LT R+     RRTE S+N+  K          SE+D+   +   D++D GDSK+ RL
Sbjct: 1   MTTLTHRA-----RRTEISKNSEKKME--------SEEDSNWEKSP-DNEDSGDSKDIRL 46

Query: 61  TLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKV 120
           TLMEEVLLLGLKD+EGYTSFWNDCISSGLRG +LIELA+RGR+ LE   MR+K LL RKV
Sbjct: 47  TLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKV 106

Query: 121 ICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKN 180
           + KSD+PTGDVLLDE LKH+K T+P ETVQ WIELL+GETWNP KL YQLRNVRER+AKN
Sbjct: 107 LLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKN 166

Query: 181 LVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALI 240
           LVEKG+LTTEKQNFLLFDMTTHP+TN   KQRL+KK+Q++VL++WVNDP RMD+R LAL+
Sbjct: 167 LVEKGILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALL 226

Query: 241 YLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298
            LAH+SDVLEN F+ L D++YD+A  R + L++LDPEVE  K +  E++WAV+AAF K
Sbjct: 227 VLAHSSDVLENVFSSLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLAAFNK 284


>gi|109150407 kelch-like 6 [Homo sapiens]
          Length = 621

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%)

Query: 132 LLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEK 191
           ++D     + E   PE     + L    + + LK     + V+  + +N V+  +L +E+
Sbjct: 157 MVDACASFLTEALNPENCVGILRLADTHSLDSLK-----KQVQSYIIQNFVQ--ILNSEE 209

Query: 192 QNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALIYLAHASDVLEN 251
              L  D   H L ++++      +V E V+  WV   H+   RL  L Y      VLEN
Sbjct: 210 FLDLPVDTLHHILKSDDLYVTEEAQVFETVMS-WVR--HKPSERLCLLPY------VLEN 260

Query: 252 AFAPLLDEQYDLATKRVRQLLDLDPEV 278
              PLLD  Y + T     L+   PEV
Sbjct: 261 VRLPLLDPWYFVETVEADPLIRQCPEV 287


>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
          Length = 619

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 31  GGAGSSEDDAQSRRDEQDDDDKGDSKE 57
           GG G  EDD +   D++DDDD+ D +E
Sbjct: 130 GGDGGEEDDKEDDDDDEDDDDEEDEEE 156


>gi|40806173 spastic paraplegia 7 isoform 2 [Homo sapiens]
          Length = 489

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 24  DKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVLLLGLKDREGYTSFWND 83
           +KE+    G    ED+ + RR E+DD    +   T L +   + LL      G +  WND
Sbjct: 110 NKEKDKSKGKAPEEDEEERRRRERDDQMYRERLRTLLVIAVVMSLLNALSTSGGSISWND 169

Query: 84  CI 85
            +
Sbjct: 170 FV 171


>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
          Length = 795

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 24  DKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVLLLGLKDREGYTSFWND 83
           +KE+    G    ED+ + RR E+DD    +   T L +   + LL      G +  WND
Sbjct: 110 NKEKDKSKGKAPEEDEEERRRRERDDQMYRERLRTLLVIAVVMSLLNALSTSGGSISWND 169

Query: 84  CI 85
            +
Sbjct: 170 FV 171


>gi|4758646 kinesin family member 3B [Homo sapiens]
          Length = 747

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGG-GAGSSEDDAQSRRDEQDDDDKGD 54
           R    +++R+   R   +K R  GG G G  E++ +    E++ DDK D
Sbjct: 364 RLKAQLEKRSIGRRKRREKRREGGGSGGGGEEEEEEGEEGEEEGDDKDD 412


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 12/30 (40%), Positives = 21/30 (70%)

Query: 28  AAGGGAGSSEDDAQSRRDEQDDDDKGDSKE 57
           AAGGG G+ +D+ +   DE+D+D++ +  E
Sbjct: 216 AAGGGTGTEDDEEELLEDEEDEDEEEELLE 245


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 23  ADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKE 57
           A  + AA   A   EDD     DE DDDD+ D  E
Sbjct: 173 AAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSE 207


>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
          Length = 1390

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 17  EASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKE 57
           E+S    D+E    G     EDD     D+ DDDD+ D  E
Sbjct: 243 ESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDE 283


>gi|33620763 sno, strawberry notch homolog 1 [Homo sapiens]
          Length = 1392

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDD 51
           + + + +R+ E     A K R  GG  GSS DD+ S  D  D+++
Sbjct: 699 KENKIKKRKGEEITREAKKARKVGGLTGSSSDDSGSESDASDNEE 743


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 133  LDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLA-----KNLVEKGV 186
            L+EA++   + Q   + V +W+++  G+  +   +   L  V++++      K+   +  
Sbjct: 4205 LEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQ 4264

Query: 187  LTTEKQNF---LLFDMTTHPLTNNNIKQRL--IKKVQEAVLDKWVNDPHRMDRRLLALIY 241
            +  E+ N    LL    T     + ++  L  +K + +++ ++ +N  H+++  LLAL  
Sbjct: 4265 IEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ 4324

Query: 242  LAHASDVL 249
              HA D L
Sbjct: 4325 FQHALDEL 4332


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 133  LDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLA-----KNLVEKGV 186
            L+EA++   + Q   + V +W+++  G+  +   +   L  V++++      K+   +  
Sbjct: 4216 LEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQ 4275

Query: 187  LTTEKQNF---LLFDMTTHPLTNNNIKQRL--IKKVQEAVLDKWVNDPHRMDRRLLALIY 241
            +  E+ N    LL    T     + ++  L  +K + +++ ++ +N  H+++  LLAL  
Sbjct: 4276 IEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ 4335

Query: 242  LAHASDVL 249
              HA D L
Sbjct: 4336 FQHALDEL 4343


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 133  LDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLA-----KNLVEKGV 186
            L+EA++   + Q   + V +W+++  G+  +   +   L  V++++      K+   +  
Sbjct: 4354 LEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQ 4413

Query: 187  LTTEKQNF---LLFDMTTHPLTNNNIKQRL--IKKVQEAVLDKWVNDPHRMDRRLLALIY 241
            +  E+ N    LL    T     + ++  L  +K + +++ ++ +N  H+++  LLAL  
Sbjct: 4414 IEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ 4473

Query: 242  LAHASDVL 249
              HA D L
Sbjct: 4474 FQHALDEL 4481


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 133  LDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLA-----KNLVEKGV 186
            L+EA++   + Q   + V +W+++  G+  +   +   L  V++++      K+   +  
Sbjct: 4176 LEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQ 4235

Query: 187  LTTEKQNF---LLFDMTTHPLTNNNIKQRL--IKKVQEAVLDKWVNDPHRMDRRLLALIY 241
            +  E+ N    LL    T     + ++  L  +K + +++ ++ +N  H+++  LLAL  
Sbjct: 4236 IEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ 4295

Query: 242  LAHASDVL 249
              HA D L
Sbjct: 4296 FQHALDEL 4303


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 133  LDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLA-----KNLVEKGV 186
            L+EA++   + Q   + V +W+++  G+  +   +   L  V++++      K+   +  
Sbjct: 3850 LEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQ 3909

Query: 187  LTTEKQNF---LLFDMTTHPLTNNNIKQRL--IKKVQEAVLDKWVNDPHRMDRRLLALIY 241
            +  E+ N    LL    T     + ++  L  +K + +++ ++ +N  H+++  LLAL  
Sbjct: 3910 IEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ 3969

Query: 242  LAHASDVL 249
              HA D L
Sbjct: 3970 FQHALDEL 3977


>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
          Length = 533

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 26  ERAAGGGAGSSEDDAQSRRDEQDDDDKGD 54
           E   GG +   EDD +S  D+QD +D GD
Sbjct: 99  EEDNGGWSSFEEDDYESPNDDQDGEDDGD 127


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 2    TSLTQRSSGLVQRRTEASRNAADKE-------RAAGGGAGSSEDDAQSRRDEQDDDDKGD 54
            ++L+Q S+  +Q   E S N  D E            G+   EDD+Q   +E+++D++ D
Sbjct: 2388 SNLSQAST--LQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDD 2445

Query: 55   SKE 57
             ++
Sbjct: 2446 QED 2448


>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform 2
           [Homo sapiens]
          Length = 490

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 10  GLVQRRTEASRNAADKERAAGGGAGSSEDDAQS--RRDEQDDDDKGDSKETRLTLMEEVL 67
           G V   T  ++    K  ++  GA S E++AQ   +  EQ D+DK   K++      EV+
Sbjct: 131 GNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVI 190

Query: 68  LLGLKDREGYT-SFWNDC-ISSGLRG 91
           +    D++G+     ND   SS L G
Sbjct: 191 VTNGYDKDGFVQDIQNDIHASSSLNG 216


>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
           [Homo sapiens]
          Length = 525

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 10  GLVQRRTEASRNAADKERAAGGGAGSSEDDAQS--RRDEQDDDDKGDSKETRLTLMEEVL 67
           G V   T  ++    K  ++  GA S E++AQ   +  EQ D+DK   K++      EV+
Sbjct: 166 GNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVI 225

Query: 68  LLGLKDREGYT-SFWNDC-ISSGLRG 91
           +    D++G+     ND   SS L G
Sbjct: 226 VTNGYDKDGFVQDIQNDIHASSSLNG 251


>gi|5031977 nicotinamide phosphoribosyltransferase precursor [Homo
           sapiens]
          Length = 491

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 127 PTGDVLLDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLAKNLVE 183
           P G+VL       V+ T P    + NWIE +  ++W P+ +    R  ++ LAK L+E
Sbjct: 126 PRGNVLFT-----VENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLE 178


>gi|4757900 calreticulin precursor [Homo sapiens]
          Length = 417

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 24  DKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKE 57
           DK+R     A   EDD     DE+D++DK + +E
Sbjct: 373 DKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEE 406


>gi|7661622 hypothetical protein LOC25906 [Homo sapiens]
          Length = 121

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 1  MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKET 58
          + S+ ++ + LV     AS +  D+E         SE+D++   D QD D+  D  E+
Sbjct: 41 LQSIAEKDNNLVPIGKPASEHYDDEEEEDDEDDEDSEEDSEDDEDMQDMDEMNDYNES 98


>gi|75677351 suppressor of defective silencing 3 [Homo sapiens]
          Length = 328

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 35 SSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVLLLGLKDR 74
          S+EDD +S R  + D+D  D+ ET L   +E   + +K++
Sbjct: 32 SAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQ 71


>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
          Length = 844

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGGGAGSSEDD 39
           R +GL  +R  A+R++      +GGG+ S+ DD
Sbjct: 741 RLNGLAAQRARAARDSLSLSSGSGGGSASASDD 773


>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
          Length = 852

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGGGAGSSEDD 39
           R +GL  +R  A+R++      +GGG+ S+ DD
Sbjct: 749 RLNGLAAQRARAARDSLSLSSGSGGGSASASDD 781


>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
          Length = 858

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGGGAGSSEDD 39
           R +GL  +R  A+R++      +GGG+ S+ DD
Sbjct: 755 RLNGLAAQRARAARDSLSLSSGSGGGSASASDD 787


>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
          Length = 850

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 7   RSSGLVQRRTEASRNAADKERAAGGGAGSSEDD 39
           R +GL  +R  A+R++      +GGG+ S+ DD
Sbjct: 747 RLNGLAAQRARAARDSLSLSSGSGGGSASASDD 779


>gi|14150005 zinc and ring finger protein 1 [Homo sapiens]
          Length = 227

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 16  TEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTL 62
           T ASR   D ERA GGG GS+ D   +  +   +   G  ++  L L
Sbjct: 73  TPASRGTGDSERAPGGG-GSASDSTYAHGNGYQETGGGHHRDGMLYL 118


>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
          Length = 560

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 4   LTQRSSGLVQRRTEASRN--AADKERAAGGGAGSSEDDAQSRRDEQDDDDKG--DSKETR 59
           + +R+  + Q   E   N   A+K  + G       D+     ++ DDDD+G  D +E+ 
Sbjct: 108 IEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESE 167

Query: 60  LTLMEE 65
            T  EE
Sbjct: 168 ETNREE 173


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,804,580
Number of Sequences: 37866
Number of extensions: 465305
Number of successful extensions: 2721
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2562
Number of HSP's gapped (non-prelim): 144
length of query: 298
length of database: 18,247,518
effective HSP length: 102
effective length of query: 196
effective length of database: 14,385,186
effective search space: 2819496456
effective search space used: 2819496456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.