Guide to the Human Genome
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Name: GOLPH3 Sequence: fasta or formatted (298aa) NCBI GI: 11545859
Description:

golgi phosphoprotein 3

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         23           2
 C cysteine            1.7          5           1
 D aspartate           7.7         23           4
 E glutamate           8.1         24           2
 F phenylalanine       1.7          5           1
 G glycine             5.0         15           3
 H histidine           1.7          5           1
 I isoleucine          2.3          7           1
 K lysine              6.7         20           2
 L leucine            15.1         45           3
 M methionine          2.0          6           1
 N asparagine          4.7         14           3
 P proline             2.7          8           2
 Q glutamine           4.4         13           1
 R arginine            8.1         24           2
 S serine              5.0         15           2
 T threonine           6.4         19           2
 V valine              6.0         18           2
 W tryptophan          1.7          5           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi phosphoprotein 3 
GOLPH3L               0.639   Golgi phosphoprotein 3-like 
KLHL6                 0.021   kelch-like 6 
ZBTB7C                0.014   zinc finger and BTB domain containing 7C 
SPG7                  0.014   spastic paraplegia 7 isoform 2 
SPG7                  0.014   spastic paraplegia 7 isoform 1 
KIF3B                 0.014   kinesin family member 3B 
ARX                   0.012   aristaless related homeobox 
NCL                   0.012   nucleolin 
ATAD2                 0.012   ATPase family, AAA domain containing 2 
SBNO1                 0.012   sno, strawberry notch homolog 1 
DST                   0.011   dystonin isoform 4 
DST                   0.011   dystonin isoform 3 
DST                   0.011   dystonin isoform 2 
DST                   0.011   dystonin isoform 1 
DST                   0.011   dystonin isoform 1eA precursor 
LCP2                  0.009   lymphocyte cytosolic protein 2 
HUWE1                 0.009   HECT, UBA and WWE domain containing 1 
ACBD5                 0.009   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.009   acyl-Coenzyme A binding domain containing 5 isoform...
NAMPT                 0.009   nicotinamide phosphoribosyltransferase precursor [Hom...
CALR                  0.009   calreticulin precursor 
C11orf51              0.009   hypothetical protein LOC25906 
SUDS3                 0.007   suppressor of defective silencing 3 
NRG2                  0.007   neuregulin 2 isoform 2 
NRG2                  0.007   neuregulin 2 isoform 4 
NRG2                  0.007   neuregulin 2 isoform 3 
NRG2                  0.007   neuregulin 2 isoform 1 
ZNRF1                 0.007   zinc and ring finger protein 1 
LMOD3                 0.007   leiomodin 3 (fetal) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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