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Search of human proteins with 224593754
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224593754 AXIN1 up-regulated 1 [Homo sapiens]
(589 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224593754 AXIN1 up-regulated 1 [Homo sapiens] 1205 0.0
gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens] 286 4e-77
gi|13540602 TGF-beta induced apoptosis protein 12 [Homo sapiens] 266 5e-71
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 44 5e-04
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ... 39 0.017
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ... 39 0.017
gi|33239445 eukaryotic translation initiation factor 3, subunit ... 37 0.051
gi|83367072 eukaryotic translation initiation factor 3, subunit ... 37 0.051
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 36 0.11
gi|203098098 shroom family member 3 protein [Homo sapiens] 36 0.11
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.15
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.15
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.15
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.15
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.15
gi|55741677 SET domain containing 1A [Homo sapiens] 35 0.15
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 35 0.15
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 35 0.15
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 35 0.15
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 35 0.15
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 35 0.15
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 35 0.15
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 35 0.15
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 35 0.15
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 35 0.15
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 35 0.19
gi|150417986 ADP-ribosylation factor guanine nucleotide-exchange... 35 0.19
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.25
gi|87298828 complement component 1, q subcomponent, B chain prec... 34 0.33
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 34 0.33
>gi|224593754 AXIN1 up-regulated 1 [Homo sapiens]
Length = 589
Score = 1205 bits (3118), Expect = 0.0
Identities = 589/589 (100%), Positives = 589/589 (100%)
Query: 1 MTGLLKRKFDQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPDRD 60
MTGLLKRKFDQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPDRD
Sbjct: 1 MTGLLKRKFDQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPDRD 60
Query: 61 FCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTSVPSRGGCTLGMALRHSAC 120
FCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTSVPSRGGCTLGMALRHSAC
Sbjct: 61 FCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTSVPSRGGCTLGMALRHSAC 120
Query: 121 RRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAGVPQAEAGLPPVVDAIDDASV 180
RRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAGVPQAEAGLPPVVDAIDDASV
Sbjct: 121 RRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAGVPQAEAGLPPVVDAIDDASV 180
Query: 181 EEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRRIDREEKRELQALRQSREDCGCH 240
EEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRRIDREEKRELQALRQSREDCGCH
Sbjct: 181 EEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRRIDREEKRELQALRQSREDCGCH 240
Query: 241 CDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPMGRVEFNQARVQTHFIHTLTRL 300
CDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPMGRVEFNQARVQTHFIHTLTRL
Sbjct: 241 CDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPMGRVEFNQARVQTHFIHTLTRL 300
Query: 301 QLEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASS 360
QLEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASS
Sbjct: 301 QLEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASS 360
Query: 361 SASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNLDNL 420
SASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNLDNL
Sbjct: 361 SASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNLDNL 420
Query: 421 SCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENANLDASCFLNGGLEGSREGSLPG 480
SCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENANLDASCFLNGGLEGSREGSLPG
Sbjct: 421 SCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENANLDASCFLNGGLEGSREGSLPG 480
Query: 481 TSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPHYTSQKVSDSLDNIEAPHFPLP 540
TSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPHYTSQKVSDSLDNIEAPHFPLP
Sbjct: 481 TSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPHYTSQKVSDSLDNIEAPHFPLP 540
Query: 541 GLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTVPASLMEPVPV 589
GLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTVPASLMEPVPV
Sbjct: 541 GLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTVPASLMEPVPV 589
>gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens]
Length = 585
Score = 286 bits (732), Expect = 4e-77
Identities = 174/424 (41%), Positives = 238/424 (56%), Gaps = 57/424 (13%)
Query: 1 MTGLLKRKFDQLD---------EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPW 51
M+G+LKRKF+++D E + VSSS S+ S + S SS
Sbjct: 1 MSGILKRKFEEVDGSSPCSSVRESDDEVSSSESADSGDSVNPSTSSH------------- 47
Query: 52 DQMPLPDRDFCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTSVPSRGGCTL 111
FTP SILKR +R R V F +TV+YF R QGFTSVPS+GG TL
Sbjct: 48 ---------------FTPSSILKREKRLRTKNVHFSCVTVYYFTRRQGFTSVPSQGGSTL 92
Query: 112 GMALRHSACRRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAGVPQAEAGLPPV 171
GM+ RH++ R+++L EFA+EQ R E LR+ L+EEKL L+ K++ G ++E
Sbjct: 93 GMSSRHNSVRQYTLGEFAREQERLHREMLREHLREEKLNSLKLKMTKNGTVESEEASTLT 152
Query: 172 VDAIDDASVEEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRRIDREEKRELQALR 231
+D I D ++ D ++E FLQP P ++RRALLRASGV++ID EEK EL+A+R
Sbjct: 153 LDDISDDDIDLD------NTEVDEYFFLQPLPTKKRRALLRASGVKKIDVEEKHELRAIR 206
Query: 232 QSREDCGCHCDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPMGRVEFNQARVQT 291
SREDCGC C CDP+TC+CSLAGIKCQ+D +FPCGC +EGC N GR+EFN RV+T
Sbjct: 207 LSREDCGCDCRVFCDPDTCTCSLAGIKCQVDRMSFPCGCTKEGCSNTAGRIEFNPIRVRT 266
Query: 292 HFIHTLTRLQLEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSS- 350
HF+HT+ +L+LE+ E Q P G + + + P+ + + + S
Sbjct: 267 HFLHTIMKLELEKNRE---------QQIPTLNGCHSEISAHSSSMGPVAHSVEYSIADSF 317
Query: 351 DMTDSSTASSSASGTSEAPDCP---THPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEE 407
++ A+ ++E DC G F GV D S + L+ S+SD EEE
Sbjct: 318 EIETEPQAAVLHLQSAEELDCQGEEEEEEEDGSSFCSGVTDSS-TQSLAPSESDEEEEEE 376
Query: 408 EEEE 411
EEEE
Sbjct: 377 EEEE 380
>gi|13540602 TGF-beta induced apoptosis protein 12 [Homo sapiens]
Length = 543
Score = 266 bits (679), Expect = 5e-71
Identities = 152/324 (46%), Positives = 198/324 (61%), Gaps = 44/324 (13%)
Query: 5 LKRKFDQLDEDNS------SVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPD 58
LKRKFD +D +S +SSS S+ C S + P+++
Sbjct: 9 LKRKFDDVDVGSSVSNSDDEISSSDSADSCDSLN-PPTTA-------------------- 47
Query: 59 RDFCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTSVPSRGGCTLGMALRHS 118
SFTP SILKR ++ R V FD +TV+YF R QGFTSVPS+GG +LGMA RH+
Sbjct: 48 -------SFTPTSILKRQKQLRRKNVRFDQVTVYYFARRQGFTSVPSQGGSSLGMAQRHN 100
Query: 119 ACRRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAG-VPQAEA-GLPPVVDAID 176
+ R ++L EFAQEQ E LR+ LKEEKL + KL+ G V EA GL +D
Sbjct: 101 SVRSYTLCEFAQEQEVNHREILREHLKEEKLHAKKMKLTKNGTVESVEADGL-----TLD 155
Query: 177 DASVEEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRRIDREEKRELQALRQSRED 236
D S E+ + V +++ FLQP P +RRRALLRASGV RID EEK+EL+A+R SRE+
Sbjct: 156 DVSDED---IDVENVEVDDYFFLQPLPTKRRRALLRASGVHRIDAEEKQELRAIRLSREE 212
Query: 237 CGCHCDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPMGRVEFNQARVQTHFIHT 296
CGC C CDPE C+CS AGIKCQ+D +FPCGC R+GC N GR+EFN RV+TH++HT
Sbjct: 213 CGCDCRLYCDPEACACSQAGIKCQVDRMSFPCGCSRDGCGNMAGRIEFNPIRVRTHYLHT 272
Query: 297 LTRLQLEQEAESFRELEAPAQGSP 320
+ +L+LE + + R + SP
Sbjct: 273 IMKLELESKRQVSRPAAPDEEPSP 296
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 43.5 bits (101), Expect = 5e-04
Identities = 54/196 (27%), Positives = 74/196 (37%), Gaps = 32/196 (16%)
Query: 306 AESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELG-----DNSCSSDMTDSSTASS 360
+ SF + E+P PP P + P PL P D++ SS + S ++
Sbjct: 1574 SNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVAT 1633
Query: 361 SASGTSEAPDCPTHPGLPGPGF------QPGVDDDSLARILSFSDSDFGGEEEEEEEGSV 414
G S AP P PG P P QPG D +D G EE + S
Sbjct: 1634 LTQGASAAPGDPHPPGPPAPAAPAPAAPQPGPDPP--------PGTDSGIEEVDSRSSSD 1685
Query: 415 GNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSG--VLDEN-ANLDASCFLNGGLE 471
L+ +S + + S GG ++ +G SG +LD A LD F GG
Sbjct: 1686 HPLETIS--SASTLSSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAF--GG-- 1739
Query: 472 GSREGSLPGTSVPPSM 487
S PG PP +
Sbjct: 1740 ----SSTPGPPYPPQL 1751
>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
sapiens]
Length = 640
Score = 38.5 bits (88), Expect = 0.017
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 20/146 (13%)
Query: 303 EQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPM---------NNELGDNSCSSDMT 353
E A S R E SPP L + L +P E GD+ ++
Sbjct: 49 EPAAGSHRAGERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGETESR 108
Query: 354 DSSTASSSASGTSEAPDCP----THPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEE 409
+S A + SG PD P + PG G G +P + A S S + E +E
Sbjct: 109 ESYDAPPTPSGARLIPDFPVARSSSPGRKGSGKRPA----AAAAAGSASPRSWDEAEAQE 164
Query: 410 EEGSVGNLDNLSCFHPADIFGTSDPG 435
EE +VG+ D AD G DPG
Sbjct: 165 EEEAVGDGDGDG---DADADGEDDPG 187
>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
sapiens]
Length = 665
Score = 38.5 bits (88), Expect = 0.017
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 20/146 (13%)
Query: 303 EQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPM---------NNELGDNSCSSDMT 353
E A S R E SPP L + L +P E GD+ ++
Sbjct: 49 EPAAGSHRAGERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGETESR 108
Query: 354 DSSTASSSASGTSEAPDCP----THPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEE 409
+S A + SG PD P + PG G G +P + A S S + E +E
Sbjct: 109 ESYDAPPTPSGARLIPDFPVARSSSPGRKGSGKRPA----AAAAAGSASPRSWDEAEAQE 164
Query: 410 EEGSVGNLDNLSCFHPADIFGTSDPG 435
EE +VG+ D AD G DPG
Sbjct: 165 EEEAVGDGDGDG---DADADGEDDPG 187
>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 37.0 bits (84), Expect = 0.051
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 307 ESFRELEAPAQGSP---PSPGEEALVPTFPLAKPPMNNELGDNSC--------SSDMTDS 355
E+ E P Q P P P E L P P A E S T+
Sbjct: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
Query: 356 STASSSASGTSEAPDCPTHPGLPGPGFQPGV------------DDDSLARILSFSDSDFG 403
+ + +ASG SE+P P LPG +P V D+ S +R + S+ D G
Sbjct: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE-DAG 129
Query: 404 GEEEEEEEGSVGNLDNLSCFHPA 426
G E E L+N P+
Sbjct: 130 GNEGRAAEAEPRALENGDADEPS 152
>gi|83367072 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 37.0 bits (84), Expect = 0.051
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 307 ESFRELEAPAQGSP---PSPGEEALVPTFPLAKPPMNNELGDNSC--------SSDMTDS 355
E+ E P Q P P P E L P P A E S T+
Sbjct: 11 EAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEP 70
Query: 356 STASSSASGTSEAPDCPTHPGLPGPGFQPGV------------DDDSLARILSFSDSDFG 403
+ + +ASG SE+P P LPG +P V D+ S +R + S+ D G
Sbjct: 71 AAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAVSE-DAG 129
Query: 404 GEEEEEEEGSVGNLDNLSCFHPA 426
G E E L+N P+
Sbjct: 130 GNEGRAAEAEPRALENGDADEPS 152
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 35.8 bits (81), Expect = 0.11
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 8/243 (3%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
N+ D+S SSD +DSS SS++S +S + D D + + SD
Sbjct: 932 NSNSSDSSNSSDSSDSSD-SSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSD 990
Query: 400 SDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENAN 459
S + + S D+ +D +SD + ++S S S +S D + +
Sbjct: 991 SSDSSDSSDSSNSS----DSSDSSDSSDSSNSSDSSNSSDSSNS-SDSSDSSDSSDSSDS 1045
Query: 460 LDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPH 519
D+S + S + S D+ SS S S DS +
Sbjct: 1046 SDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDS 1105
Query: 520 YTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTV 579
S SDS D+ ++ + S D+S S S ++E+ D S D+
Sbjct: 1106 SDSSDSSDSSDSSDSSN--SSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSS 1163
Query: 580 PAS 582
+S
Sbjct: 1164 DSS 1166
Score = 33.9 bits (76), Expect = 0.43
Identities = 52/247 (21%), Positives = 92/247 (37%), Gaps = 12/247 (4%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
+++ ++S SSD +DS ++ S++S S++ D + DS S
Sbjct: 554 SSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS 613
Query: 400 SDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHS----YSGCSFTSGVLD 455
SD + + + S D+ +D +SD S +S S S +S D
Sbjct: 614 SDSSDSSDSKSDSSKSESDSSDSDSKSD---SSDSNSSDSSDNSDSSDSSNSSNSSDSSD 670
Query: 456 ENANLDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYS 515
+ + D+S + S ++ S D+ SS D S SS S +
Sbjct: 671 SSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSN 730
Query: 516 LGPHYTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQF 575
S SDS D+ ++ + S D+S S S ++++ D S
Sbjct: 731 SSDSSDSSNSSDSSDSSDSSN-----SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDS 785
Query: 576 EDTVPAS 582
D+ +S
Sbjct: 786 NDSSNSS 792
Score = 33.1 bits (74), Expect = 0.73
Identities = 52/248 (20%), Positives = 88/248 (35%), Gaps = 9/248 (3%)
Query: 340 NNELGDNSCSSDMTDSSTA-----SSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARI 394
+++ D+S SSD +DSS + SS +S +S++ D + D + +
Sbjct: 782 SSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDS 841
Query: 395 LSFSDSDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVL 454
SDS G + + N + S +D +SD S + S S S
Sbjct: 842 SDSSDSSDGSDSDSSNRSDSSNSSDSS--DSSDSSNSSDSSD--SSDSNESSNSSDSSDS 897
Query: 455 DENANLDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDY 514
+++ D+S N S + S D SS S S DS + +
Sbjct: 898 SNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSS 957
Query: 515 SLGPHYTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQ 574
+ S SDS + + S D+S S S ++++ D S
Sbjct: 958 NSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSN 1017
Query: 575 FEDTVPAS 582
D+ +S
Sbjct: 1018 SSDSSNSS 1025
Score = 32.7 bits (73), Expect = 0.96
Identities = 40/195 (20%), Positives = 71/195 (36%), Gaps = 8/195 (4%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
+++ D+S SSD +DSS +S S+ ++ + + D + SD
Sbjct: 1030 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSD 1089
Query: 400 SDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENAN 459
S + + + S D+ +D +SD +S + S S +S D + +
Sbjct: 1090 SSNSSDSSDSSDSS----DSSDSSDSSDSSDSSD----SSNSSDSSDSSDSSDSSDSSNS 1141
Query: 460 LDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPH 519
D+S S + S D+ SS S S DS + +
Sbjct: 1142 SDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 1201
Query: 520 YTSQKVSDSLDNIEA 534
S SDS D+ ++
Sbjct: 1202 SDSSDSSDSSDSSDS 1216
Score = 32.3 bits (72), Expect = 1.3
Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 17/243 (6%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
+++ D+S SSD DSS +S S+ ++ + + D S + S SD
Sbjct: 773 SSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNS-------------SDSSDSSDSSDSD 819
Query: 400 SDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENAN 459
S + + S D+ + +D +SD S S S S S +++N
Sbjct: 820 SSNSSDSSNSSDSS----DSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSN 875
Query: 460 LDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPH 519
S + E S +S D+ SS+ S S +S + ++
Sbjct: 876 SSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNS 935
Query: 520 YTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTV 579
S SDS D+ ++ + S SS +S S ++ + D S D+
Sbjct: 936 SDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSS 995
Query: 580 PAS 582
+S
Sbjct: 996 DSS 998
Score = 32.3 bits (72), Expect = 1.3
Identities = 47/238 (19%), Positives = 85/238 (35%), Gaps = 8/238 (3%)
Query: 345 DNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDSDFGG 404
D+S SSD ++SS +S+S+ ++ + ++ DS S SD
Sbjct: 943 DSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSN 1002
Query: 405 EEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENANLDASC 464
+ + + N S + S +S + S S +S D + + D+S
Sbjct: 1003 SSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSD 1062
Query: 465 FLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPHYTSQK 524
+ S + S D+ SS+ S S DS + + S
Sbjct: 1063 SSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSN 1122
Query: 525 VSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDPFIDSQFEDTVPAS 582
SDS D+ ++ S D+S+ S S ++++ D S D+ +S
Sbjct: 1123 SSDSSDSSDS--------SDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSS 1172
Score = 32.3 bits (72), Expect = 1.3
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDS 390
+++ D+S SS+ +DSS +S S+ TS++ D G G G D DS
Sbjct: 1237 SSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDS 1287
Score = 32.0 bits (71), Expect = 1.6
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
+NE D+S SSD +DSS SS +S +S++ D + +D+S ++ S +
Sbjct: 1231 SNESSDSSDSSDSSDSSN-SSDSSDSSDSSDSTSDS-----------NDESDSQSKSGNG 1278
Query: 400 SDFGGEEEEEEEGSVGN 416
++ G + + + EGS N
Sbjct: 1279 NNNGSDSDSDSEGSDSN 1295
Score = 30.0 bits (66), Expect = 6.2
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 11/198 (5%)
Query: 341 NELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDS 400
N +++ + D S +SS+ G + + G + DDDS S SD+
Sbjct: 466 NSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSD----STSDT 521
Query: 401 DFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENANL 460
+ + G+ GN DN +SD S S S S S D N++
Sbjct: 522 N---NSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSS 578
Query: 461 DASCFLNGGLEGSREGSLPGTSVPPSMDAGRSS----SVDLSLSSCDSFELLQALPDYSL 516
D+ + + S S ++ S D+ SS S D S S DS + D
Sbjct: 579 DSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDS 638
Query: 517 GPHYTSQKVSDSLDNIEA 534
+ SDS DN ++
Sbjct: 639 KSDSSDSNSSDSSDNSDS 656
Score = 29.6 bits (65), Expect = 8.1
Identities = 48/229 (20%), Positives = 79/229 (34%), Gaps = 23/229 (10%)
Query: 340 NNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSD 399
+++ DNS SSD ++SS +S S+ + + D S + + SD
Sbjct: 647 SSDSSDNSDSSDSSNSSNSSDSSDSSDSS------------------DSSSSSDSSNSSD 688
Query: 400 SDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFTSGVLDENAN 459
S + E S + S +D +SD S S S +S + + +
Sbjct: 689 SSDSSDSSNSSESS-----DSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDS 743
Query: 460 LDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPH 519
D+S N S + S D+ SS S S DS + +
Sbjct: 744 SDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDS 803
Query: 520 YTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALD 568
S SDS D+ ++ S D+S S S +++ D
Sbjct: 804 SNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSD 852
>gi|203098098 shroom family member 3 protein [Homo sapiens]
Length = 1996
Score = 35.8 bits (81), Expect = 0.11
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 464 CFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELLQALPDYSLGPHYTSQ 523
C +G G EG+ S+P R+ + DS + PD++ HY Q
Sbjct: 1403 CEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAARE--DSLPEESSAPDFANLKHYQKQ 1460
Query: 524 KVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEALDP--FIDSQFEDTVPA 581
+ SL + P PL S PG S ES++ S P E + F+ +
Sbjct: 1461 QSLPSLCSTSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSS 1520
Query: 582 SLMEPVP 588
EP+P
Sbjct: 1521 PTFEPLP 1527
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 316 AQGSPPSPGEEALVPTF---------PLAKPPMNNELGDNSCSSDMTDSSTASSSASGTS 366
A G PP P + P + P A+ P ++ +S SS + SS++SSS+S +
Sbjct: 61 APGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSS-SSSSSSSSSSSSSSSSSSSSSQA 119
Query: 367 EAPDCPTHPGLPGP 380
+ PD P P P
Sbjct: 120 KKPDPPLPPAFGAP 133
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 316 AQGSPPSPGEEALVPTFPLAKPPMNNE-LGDNSCSSDMTDSSTASSSASGTSEAPDCPTH 374
A G+P P ++ VP P PP+ D +C ++S+S +S P C
Sbjct: 794 ASGAPGEP--QSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPPCSPE 851
Query: 375 PGLPGPGFQP 384
PG PG +P
Sbjct: 852 PGREAPGPEP 861
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 316 AQGSPPSPGEEALVPTFPLAKPPMNNE-LGDNSCSSDMTDSSTASSSASGTSEAPDCPTH 374
A G+P P ++ VP P PP+ D +C ++S+S +S P C
Sbjct: 794 ASGAPGEP--QSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPPCSPE 851
Query: 375 PGLPGPGFQP 384
PG PG +P
Sbjct: 852 PGREAPGPEP 861
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 316 AQGSPPSPGEEALVPTF---------PLAKPPMNNELGDNSCSSDMTDSSTASSSASGTS 366
A G PP P + P + P A+ P ++ +S SS + SS++SSS+S +
Sbjct: 61 APGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSS-SSSSSSSSSSSSSSSSSSSSSQA 119
Query: 367 EAPDCPTHPGLPGP 380
+ PD P P P
Sbjct: 120 KKPDPPLPPAFGAP 133
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 316 AQGSPPSPGEEALVPTFPLAKPPMNNE-LGDNSCSSDMTDSSTASSSASGTSEAPDCPTH 374
A G+P P ++ VP P PP+ D +C ++S+S +S P C
Sbjct: 794 ASGAPGEP--QSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPPCSPE 851
Query: 375 PGLPGPGFQP 384
PG PG +P
Sbjct: 852 PGREAPGPEP 861
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEE 48
E +SS SSSSSSS S S S SSS S + D EEE
Sbjct: 1034 ESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEE 1068
Score = 33.5 bits (75), Expect = 0.56
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 13 DEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEE 48
D ++SS SSSSSSS S S S SSS + + EEE
Sbjct: 1032 DSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEE 1067
Score = 32.7 bits (73), Expect = 0.96
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 10 DQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEE 48
D + SS SSSSSSS S S S SSS S + +EE
Sbjct: 1028 DSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEE 1066
Score = 32.0 bits (71), Expect = 1.6
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 13 DEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGP 50
+ +SS SSSSSSS S S S SS S + EEE P
Sbjct: 1034 ESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERP 1071
Score = 30.0 bits (66), Expect = 6.2
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 13 DEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPDRDFCGPRSFTP 69
D +N S S S SSS S S S SSS S + S E + +R P + P
Sbjct: 1024 DGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPP 1080
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 35.4 bits (80), Expect = 0.15
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 302 LEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSS 361
LE E ES EL AP PP+ E+ VP P A+P EL + + S D S S
Sbjct: 370 LEPEVESSPEL-AP----PPACPSESPVPIAPTAQP---EELLNGAPSPPAVDLSPVSEP 421
Query: 362 ASGTSEAPDCPTHPGLPG--PGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVG 415
E P +P P P + + EEEEEEEG G
Sbjct: 422 EEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEME--------EEEEEEEGEAG 469
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 35.4 bits (80), Expect = 0.15
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 302 LEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSS 361
LE E ES EL AP PP+ E+ VP P A+P EL + + S D S S
Sbjct: 283 LEPEVESSPEL-AP----PPACPSESPVPIAPTAQP---EELLNGAPSPPAVDLSPVSEP 334
Query: 362 ASGTSEAPDCPTHPGLPG--PGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVG 415
E P +P P P + + EEEEEEEG G
Sbjct: 335 EEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEME--------EEEEEEEGEAG 382
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 35.4 bits (80), Expect = 0.15
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 302 LEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSS 361
LE E ES EL AP PP+ E+ VP P A+P EL + + S D S S
Sbjct: 206 LEPEVESSPEL-AP----PPACPSESPVPIAPTAQP---EELLNGAPSPPAVDLSPVSEP 257
Query: 362 ASGTSEAPDCPTHPGLPG--PGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVG 415
E P +P P P + + EEEEEEEG G
Sbjct: 258 EEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEME--------EEEEEEEGEAG 305
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 35.4 bits (80), Expect = 0.15
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 302 LEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSS 361
LE E ES EL AP PP+ E+ VP P A+P EL + + S D S S
Sbjct: 370 LEPEVESSPEL-AP----PPACPSESPVPIAPTAQP---EELLNGAPSPPAVDLSPVSEP 421
Query: 362 ASGTSEAPDCPTHPGLPG--PGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVG 415
E P +P P P + + EEEEEEEG G
Sbjct: 422 EEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEME--------EEEEEEEGEAG 469
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 35.4 bits (80), Expect = 0.15
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 302 LEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSS 361
LE E ES EL AP PP+ E+ VP P A+P EL + + S D S S
Sbjct: 174 LEPEVESSPEL-AP----PPACPSESPVPIAPTAQP---EELLNGAPSPPAVDLSPVSEP 225
Query: 362 ASGTSEAPDCPTHPGLPG--PGFQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVG 415
E P +P P P + + EEEEEEEG G
Sbjct: 226 EEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEME--------EEEEEEEGEAG 273
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
E +SS SSSSS SG SRS S +SS+SR E P Q P P
Sbjct: 31 ERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRP-QQQPQP 73
Score = 30.0 bits (66), Expect = 6.2
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 329 VPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDC-------PTHPGLPGPG 381
+P PL K ++ +S SS+ + SS++SSS SG+S P P P P
Sbjct: 9 LPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQ 68
Query: 382 FQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNL---DNLSCFHPA 426
QP + R + S + G + L +L+C+ P+
Sbjct: 69 QQPQPRSPAARRAAARSRAAAAGGMRRDPAPGFSMLLFGVSLACYSPS 116
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
E +SS SSSSS SG SRS S +SS+SR E P Q P P
Sbjct: 31 ERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRP-QQQPQP 73
Score = 30.0 bits (66), Expect = 6.2
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 329 VPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDC-------PTHPGLPGPG 381
+P PL K ++ +S SS+ + SS++SSS SG+S P P P P
Sbjct: 9 LPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQ 68
Query: 382 FQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNL---DNLSCFHPA 426
QP + R + S + G + L +L+C+ P+
Sbjct: 69 QQPQPRSPAARRAAARSRAAAAGGMRRDPAPGFSMLLFGVSLACYSPS 116
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
E +SS SSSSS SG SRS S +SS+SR E P Q P P
Sbjct: 31 ERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRP-QQQPQP 73
Score = 30.0 bits (66), Expect = 6.2
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 329 VPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDC-------PTHPGLPGPG 381
+P PL K ++ +S SS+ + SS++SSS SG+S P P P P
Sbjct: 9 LPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQ 68
Query: 382 FQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNL---DNLSCFHPA 426
QP + R + S + G + L +L+C+ P+
Sbjct: 69 QQPQPRSPAARRAAARSRAAAAGGMRRDPAPGFSMLLFGVSLACYSPS 116
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 35.4 bits (80), Expect = 0.15
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
E +SS SSSSS SG SRS S +SS+SR E P Q P P
Sbjct: 31 ERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRP-QQQPQP 73
Score = 30.0 bits (66), Expect = 6.2
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 329 VPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDC-------PTHPGLPGPG 381
+P PL K ++ +S SS+ + SS++SSS SG+S P P P P
Sbjct: 9 LPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQ 68
Query: 382 FQPGVDDDSLARILSFSDSDFGGEEEEEEEGSVGNL---DNLSCFHPA 426
QP + R + S + G + L +L+C+ P+
Sbjct: 69 QQPQPRSPAARRAAARSRAAAAGGMRRDPAPGFSMLLFGVSLACYSPS 116
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 35.0 bits (79), Expect = 0.19
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 320 PPSPGE----EALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHP 375
P PG+ +L +PP ++ +S SS + S+TA E P+ P P
Sbjct: 20 PQRPGDLQLGASLYELVGYRQPPSSSSSSTSSTSSTSSSSTTAPLLPKAAREKPEAPAEP 79
Query: 376 GLPGPG 381
PGPG
Sbjct: 80 PGPGPG 85
>gi|150417986 ADP-ribosylation factor guanine nucleotide-exchange
factor 2 [Homo sapiens]
Length = 1785
Score = 35.0 bits (79), Expect = 0.19
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 10/159 (6%)
Query: 294 IHTLTRLQLEQEAESFRELEAPAQGSPPSP--GEEALVPTFPLAKPPMNNELGDNSCSSD 351
I T Q+ QEA RELE P Q P SP A+ P F K +D
Sbjct: 193 IFTRMENQVLQEA---RELEKPIQSKPQSPVIQAAAVSPKFVRLKHSQAQSKPTTPEKTD 249
Query: 352 MTDSSTA-SSSASGTSEAPDCPTHPGLPGPGFQPGVDD---DSLARILSFSDSDFGGEEE 407
+T+ A S S ++E D P G G G + D L +++ + + +
Sbjct: 250 LTNGEHARSDSGKVSTENGDAPRERGSSLSGTDDGAQEVVKDILEDVVTSAIKEAAEKHG 309
Query: 408 -EEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYS 445
E E +G L+ C P + S G+A S S
Sbjct: 310 LTEPERVLGELECQECAIPPGVDENSQTNGIADDRQSLS 348
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.7 bits (78), Expect = 0.25
Identities = 28/84 (33%), Positives = 33/84 (39%)
Query: 6 KRKFDQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLPDRDFCGPR 65
KRK +SS SSSSSSS S S S SSS S + S P P+
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK 2661
Query: 66 SFTPLSILKRARRERPGRVAFDGI 89
+P RR R R D +
Sbjct: 2662 PASPKKPPPGERRSRSPRKPIDSL 2685
Score = 32.3 bits (72), Expect = 1.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 313 EAPAQGSPPSPGE-EALVPTFPLAKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDC 371
EA +G PP P + + + ++ +S SS + SS++SSS+S +S +
Sbjct: 2588 EAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647
Query: 372 PTHPGLPGPGFQP 384
P PGP P
Sbjct: 2648 SPSPAKPGPQALP 2660
Score = 31.6 bits (70), Expect = 2.1
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 16 NSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEG 49
+SS SSSSSSS S S S SSS S + S+ EG
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEG 2565
Score = 29.6 bits (65), Expect = 8.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 14 EDNSSVSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPL 56
++ S SSSSSSS S S S SSS S + S + +P+
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPV 2570
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 34.3 bits (77), Expect = 0.33
Identities = 22/65 (33%), Positives = 27/65 (41%)
Query: 352 MTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLARILSFSDSDFGGEEEEEEE 411
+ D S A S +G P P PG PGP QPG + L D G E+ +
Sbjct: 21 LIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDP 80
Query: 412 GSVGN 416
G GN
Sbjct: 81 GIPGN 85
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 34.3 bits (77), Expect = 0.33
Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 19/158 (12%)
Query: 298 TRLQLEQEAESFRELEAPAQGSPPSPGEEALVPTFPLAK-----PPMNNELGDNSCSSDM 352
TRL+ ++ + EL + G P P + P + +A PP L +S +
Sbjct: 599 TRLKEKKPGDLSDELRI-SLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPI 657
Query: 353 TDSSTASSSASGTSEAPDCPTHPGLPGP-------GFQPGVDDDSLARI----LSFSDSD 401
+S + A G + P T L G FQ +++ + R L SD +
Sbjct: 658 PESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEE 717
Query: 402 FGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLAS 439
EEEEEEE D PAD G PGG +S
Sbjct: 718 -SSEEEEEEESDEDKPDETGFITPAD-SGLITPGGFSS 753
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,463,624
Number of Sequences: 37866
Number of extensions: 1478580
Number of successful extensions: 10601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 9355
Number of HSP's gapped (non-prelim): 1138
length of query: 589
length of database: 18,247,518
effective HSP length: 108
effective length of query: 481
effective length of database: 14,157,990
effective search space: 6809993190
effective search space used: 6809993190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.