Search of human proteins with 223890281

Search of human proteins with 223890281

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223890281 nuclear receptor coactivator 4 isoform 2 [Homo
sapiens]
         (630 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223890281 nuclear receptor coactivator 4 isoform 2 [Homo sapi...  1298   0.0  
gi|223890278 nuclear receptor coactivator 4 isoform 1 [Homo sapi...  1296   0.0  
gi|14149617 nuclear receptor coactivator 4 isoform 3 [Homo sapiens]  1269   0.0  
gi|223890287 nuclear receptor coactivator 4 isoform 3 [Homo sapi...  1269   0.0  
gi|223890284 nuclear receptor coactivator 4 isoform 3 [Homo sapi...  1269   0.0  
gi|84993742 tripartite motif-containing 71 [Homo sapiens]              38   0.025
gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]         36   0.12 
gi|126362971 serine/threonine kinase 10 [Homo sapiens]                 36   0.12 
gi|226497734 RNA binding motif protein 19 [Homo sapiens]               35   0.21 
gi|226497654 RNA binding motif protein 19 [Homo sapiens]               35   0.21 
gi|226497574 RNA binding motif protein 19 [Homo sapiens]               35   0.21 
gi|119120894 Dmx-like 2 [Homo sapiens]                                 33   0.61 
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    33   0.61 
gi|4504169 glutathione synthetase [Homo sapiens]                       33   1.0  
gi|23503243 Ras association (RalGDS/AF-6) domain family (N-termi...    33   1.0  
gi|32454739 tripartite motif-containing 3 [Homo sapiens]               31   3.0  
gi|32454737 tripartite motif-containing 3 [Homo sapiens]               31   3.0  
gi|22027627 TNF receptor-associated factor 5 [Homo sapiens]            31   3.0  
gi|77404348 TNF receptor-associated factor 5 [Homo sapiens]            31   3.0  
gi|11321603 TNF receptor-associated factor 5 [Homo sapiens]            31   3.0  
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]      31   3.9  
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]        31   3.9  
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]        31   3.9  
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]        31   3.9  
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]      31   3.9  
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]        31   3.9  
gi|157952211 zinc finger protein 250 isoform b [Homo sapiens]          31   3.9  
gi|45387947 zinc finger protein 250 isoform a [Homo sapiens]           31   3.9  
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    30   5.2  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    30   5.2  

>gi|223890281 nuclear receptor coactivator 4 isoform 2 [Homo
           sapiens]
          Length = 630

 Score = 1298 bits (3360), Expect = 0.0
 Identities = 630/630 (100%), Positives = 630/630 (100%)

Query: 1   MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN 60
           MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
Sbjct: 1   MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN 60

Query: 61  LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH 120
           LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
Sbjct: 61  LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH 120

Query: 121 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE 180
           QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
Sbjct: 121 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE 180

Query: 181 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP 240
           HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
Sbjct: 181 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP 240

Query: 241 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE 300
           QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
Sbjct: 241 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE 300

Query: 301 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT 360
           MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
Sbjct: 301 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT 360

Query: 361 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC 420
           DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
Sbjct: 361 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC 420

Query: 421 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR 480
           RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
Sbjct: 421 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR 480

Query: 481 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK 540
           KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
Sbjct: 481 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK 540

Query: 541 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH 600
           SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
Sbjct: 541 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH 600

Query: 601 YGLPAVCDLFACMQLKVDKEKWLYRTPLQM 630
           YGLPAVCDLFACMQLKVDKEKWLYRTPLQM
Sbjct: 601 YGLPAVCDLFACMQLKVDKEKWLYRTPLQM 630


>gi|223890278 nuclear receptor coactivator 4 isoform 1 [Homo
           sapiens]
          Length = 650

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 629/629 (100%), Positives = 629/629 (100%)

Query: 1   MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN 60
           MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN
Sbjct: 1   MGAQLTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDN 60

Query: 61  LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH 120
           LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH
Sbjct: 61  LREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTH 120

Query: 121 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE 180
           QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE
Sbjct: 121 QLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPE 180

Query: 181 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP 240
           HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP
Sbjct: 181 HLMAHASSANIGPFLEKRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDP 240

Query: 241 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE 300
           QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE
Sbjct: 241 QDWLTQKQTLENSQTSSRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIE 300

Query: 301 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT 360
           MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT
Sbjct: 301 MEKVGDQELPDQDEMDLSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKT 360

Query: 361 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC 420
           DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC
Sbjct: 361 DSCTNCQGNQPKGVEIENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVC 420

Query: 421 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR 480
           RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR
Sbjct: 421 RANEPCTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPR 480

Query: 481 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK 540
           KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK
Sbjct: 481 KEVIEQTKAPKAMTPSRIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFK 540

Query: 541 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH 600
           SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH
Sbjct: 541 SPMNTSWCSFNTADWVLPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDH 600

Query: 601 YGLPAVCDLFACMQLKVDKEKWLYRTPLQ 629
           YGLPAVCDLFACMQLKVDKEKWLYRTPLQ
Sbjct: 601 YGLPAVCDLFACMQLKVDKEKWLYRTPLQ 629


>gi|14149617 nuclear receptor coactivator 4 isoform 3 [Homo sapiens]
          Length = 614

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 614/614 (100%), Positives = 614/614 (100%)

Query: 17  MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 76
           MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
Sbjct: 1   MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 60

Query: 77  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 136
           ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
Sbjct: 61  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 120

Query: 137 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 196
           CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
Sbjct: 121 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 180

Query: 197 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 256
           KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
Sbjct: 181 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 240

Query: 257 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 316
           SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
Sbjct: 241 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 300

Query: 317 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 376
           LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
Sbjct: 301 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 360

Query: 377 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 436
           ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
Sbjct: 361 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 420

Query: 437 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 496
           NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
Sbjct: 421 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 480

Query: 497 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 556
           RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
Sbjct: 481 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 540

Query: 557 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 616
           LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
Sbjct: 541 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 600

Query: 617 VDKEKWLYRTPLQM 630
           VDKEKWLYRTPLQM
Sbjct: 601 VDKEKWLYRTPLQM 614


>gi|223890287 nuclear receptor coactivator 4 isoform 3 [Homo
           sapiens]
          Length = 614

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 614/614 (100%), Positives = 614/614 (100%)

Query: 17  MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 76
           MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
Sbjct: 1   MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 60

Query: 77  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 136
           ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
Sbjct: 61  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 120

Query: 137 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 196
           CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
Sbjct: 121 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 180

Query: 197 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 256
           KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
Sbjct: 181 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 240

Query: 257 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 316
           SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
Sbjct: 241 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 300

Query: 317 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 376
           LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
Sbjct: 301 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 360

Query: 377 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 436
           ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
Sbjct: 361 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 420

Query: 437 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 496
           NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
Sbjct: 421 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 480

Query: 497 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 556
           RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
Sbjct: 481 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 540

Query: 557 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 616
           LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
Sbjct: 541 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 600

Query: 617 VDKEKWLYRTPLQM 630
           VDKEKWLYRTPLQM
Sbjct: 601 VDKEKWLYRTPLQM 614


>gi|223890284 nuclear receptor coactivator 4 isoform 3 [Homo
           sapiens]
          Length = 614

 Score = 1269 bits (3284), Expect = 0.0
 Identities = 614/614 (100%), Positives = 614/614 (100%)

Query: 17  MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 76
           MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL
Sbjct: 1   MNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHL 60

Query: 77  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 136
           ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV
Sbjct: 61  ECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSV 120

Query: 137 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 196
           CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE
Sbjct: 121 CLERLGSLTLKPEDSTVLLFEADTITLRQTITTFGSLKTIQIPEHLMAHASSANIGPFLE 180

Query: 197 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 256
           KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS
Sbjct: 181 KRGCISMPEQKSASGIVAVPFSEWLLGSKPASGYQAPYIPSTDPQDWLTQKQTLENSQTS 240

Query: 257 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 316
           SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD
Sbjct: 241 SRACNFFNNVGGNLKGLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEMD 300

Query: 317 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 376
           LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI
Sbjct: 301 LSDWLVTPQESHKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEI 360

Query: 377 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 436
           ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE
Sbjct: 361 ENLGNLKCLNDHLEAKKPLSTPSMVTEDWLVQNHQDPCKVEEVCRANEPCTSFAECVCDE 420

Query: 437 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 496
           NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS
Sbjct: 421 NCEKEALYKWLLKKEGKDKNGMPVEPKPEPEKHKDSLNMWLCPRKEVIEQTKAPKAMTPS 480

Query: 497 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 556
           RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV
Sbjct: 481 RIADSFQVIKNSPLSEWLIRPPYKEGSPKEVPGTEDRAGKQKFKSPMNTSWCSFNTADWV 540

Query: 557 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 616
           LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK
Sbjct: 541 LPGKKMGNLSQLSSGEDKWLLRKKAQEVLLNSPLQEEHNFPPDHYGLPAVCDLFACMQLK 600

Query: 617 VDKEKWLYRTPLQM 630
           VDKEKWLYRTPLQM
Sbjct: 601 VDKEKWLYRTPLQM 614


>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
          Length = 868

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 29/148 (19%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 33  LLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDL 92
           L      R+ ++L+I       +Q++   + V++++ +  +RH + L  RE  L  +V+ 
Sbjct: 329 LADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEK 388

Query: 93  IYQLKEETLQQQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSVCLERLGSLT------- 145
           I Q+K ++L  Q ++L   L +       ++    +  A  + +  +R+ +         
Sbjct: 389 IRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVR 448

Query: 146 --LKPEDSTVLLFEADTITLRQTITTFG 171
             L+P++   ++F      L   I +FG
Sbjct: 449 SLLQPQEDDRVMFTPPDQALYLAIKSFG 476


>gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]
          Length = 603

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 5   LTTFALAGAVRRMNTFQDQSGSSSNREPLLRCSDARRDLELAIGGVLRAEQQIKDNLREV 64
           LT  +++  +   NT   +  S+     +L   + +++L L  G +    +++K N+  V
Sbjct: 426 LTDPSVSQQINPRNTIDTKDYSTHRLYQVLEGENKKKELFLTHGNLEEVAEKLKQNISLV 485

Query: 65  KAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETL---QQQAQQLYSLLGQFNCLTHQ 121
           + Q+      H   L  R   +    D +YQ   + L   Q+  +Q + +  Q N L H 
Sbjct: 486 QDQLAVSAQEHSFFLSKRNKDVDMLCDTLYQGGNQLLLSDQELTEQFHKVESQLNKLNHL 545

Query: 122 LE------CTQNKDLANQVSVCLER 140
           L        T+ K LAN     +ER
Sbjct: 546 LTDILADVKTKRKTLANNKLHQMER 570


>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
          Length = 968

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 40  RRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEE 99
           + DLELA+      ++   DN RE+  +   C+ +  E LR RE  L+E  +   Q + +
Sbjct: 703 KEDLELAM------KRLTTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQ 756

Query: 100 TLQQQAQQLYSLLGQFNCLTHQLECTQ----NKDLANQVSV 136
            ++QQ +  Y L        H+ E  Q    N+ +  Q+ V
Sbjct: 757 LVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMIEQLKV 797


>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 103 QQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLL----FEA 158
           +QAQ+    L       H+LE  +  + A + +V L R   +  K   S +L+    F+A
Sbjct: 785 EQAQKALKQLQGHVVDGHKLE-VRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQA 843

Query: 159 DTITLRQTITTFGSLKTIQIPEHLMAHASSANIG--PFLEKR 198
            +  +R+  +TFG LKT+++P+ +    +    G   FL K+
Sbjct: 844 HSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQ 885


>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 103 QQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLL----FEA 158
           +QAQ+    L       H+LE  +  + A + +V L R   +  K   S +L+    F+A
Sbjct: 785 EQAQKALKQLQGHVVDGHKLE-VRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQA 843

Query: 159 DTITLRQTITTFGSLKTIQIPEHLMAHASSANIG--PFLEKR 198
            +  +R+  +TFG LKT+++P+ +    +    G   FL K+
Sbjct: 844 HSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQ 885


>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 103 QQAQQLYSLLGQFNCLTHQLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLL----FEA 158
           +QAQ+    L       H+LE  +  + A + +V L R   +  K   S +L+    F+A
Sbjct: 785 EQAQKALKQLQGHVVDGHKLE-VRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQA 843

Query: 159 DTITLRQTITTFGSLKTIQIPEHLMAHASSANIG--PFLEKR 198
            +  +R+  +TFG LKT+++P+ +    +    G   FL K+
Sbjct: 844 HSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQ 885


>gi|119120894 Dmx-like 2 [Homo sapiens]
          Length = 3036

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 267  GGNLK-GLENWLLKSEKSSYQKCNSHSTTSSFSIEMEKVGDQELPDQDEM-DLSDWLVTP 324
            GG L+  L NWL K   + ++ CN  S    +S +     + +L DQ+EM D  D  +  
Sbjct: 2066 GGKLRFQLYNWLEKEIAALHEICNHESVIKEYSSKTYSKVESDLLDQEEMVDKPD--IGS 2123

Query: 325  QESHKL-RKPENGSRETSEKFKLLFQ 349
             E H++ R+     RE +E+ K   Q
Sbjct: 2124 YERHQIERRRLQAKREHAERRKSWLQ 2149


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 328 HKLRKPENGSRETSEKFKLLFQSYNVNDWLVKTDSCTNCQGNQPKGVEIEN-LGNLKCLN 386
           HK +  E G    S++ KL   +Y   D   K+D     + +    +  EN L  LK   
Sbjct: 636 HKHKNKEKGQCSISQELKLKSFTYEYEDSKQKSDKAILLEND----LSTENKLKVLKHDR 691

Query: 387 DHLEAKKPLSTPSMVTEDWLVQNHQDPCKV------------EEVCRANEPCTSFAECVC 434
           DH + ++ LS   +  ++WL ++ +   ++            EE  R+N+     +    
Sbjct: 692 DHFKKEEKLSKMKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEK 751

Query: 435 DENCEKEALYKWLLKKEGKDK 455
               EK  LYK   KK+ KD+
Sbjct: 752 SPKEEKLRLYKEERKKKSKDR 772


>gi|4504169 glutathione synthetase [Homo sapiens]
          Length = 474

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)

Query: 48  GGVLRAEQQIKDNLREV--KAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQA 105
           G +L+ +QQ+++  R+   +A     + R  +   S EV  Y    L   L    L +QA
Sbjct: 6   GSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQA 65

Query: 106 QQLYSLLGQFNCLTHQLECTQNKDLANQVSVCLERLGSLTLKPEDSTVLLFEADTITLRQ 165
              Y++   FN L          D  +Q +  LE+  S T+K +D T  LF+     L++
Sbjct: 66  ---YAVQMDFNLLV---------DAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKE 113

Query: 166 TI 167
            I
Sbjct: 114 GI 115


>gi|23503243 Ras association (RalGDS/AF-6) domain family
           (N-terminal) member 8 [Homo sapiens]
          Length = 392

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 20/163 (12%)

Query: 54  EQQIKDNLREVKAQIHSC---ISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYS 110
           E+Q+KD L+E++ +I  C   +  +L  +R+ E  L  +     +L+ E  + Q  +   
Sbjct: 237 EKQLKDQLQEIRQKITECENKLKDYLAQIRTMESGLEAE-----KLQREVQEAQVNE-EE 290

Query: 111 LLGQFNCLTHQLEC--TQNKDLANQVSVCLERLGSLTLKPEDS----TVLLFEADTITLR 164
           + G+   +  +++    Q+  L N +      LG  T + +D       L  E   + L+
Sbjct: 291 VKGKIGKVKGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQ 350

Query: 165 QTITTFGSLKTIQIPEHLMAHASSANIGPFLEKRGCISMPEQK 207
           Q I   G+  T+   E +   AS A+I     +RG I + +++
Sbjct: 351 QFIQQTGTKVTVLPAEPIEIEASHADI-----ERGIIILSDKQ 388


>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 16/146 (10%)

Query: 47  IGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQ 106
           +GG+    QQ+++   E  AQI +      + L+ R+  L   ++ I   K++ LQ Q  
Sbjct: 183 VGGI---SQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLD 239

Query: 107 QLYSLLGQFNCLTHQLECTQNKDLANQVSVCL------ERLGSLTL-----KPEDSTVLL 155
            L    GQ +  +      Q   L +   V L      ERL +L       +P ++  L 
Sbjct: 240 TLRQ--GQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLE 297

Query: 156 FEADTITLRQTITTFGSLKTIQIPEH 181
              +   LR+++   G+L T     H
Sbjct: 298 LVLEVDGLRRSVLNLGALLTTSATAH 323


>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 16/146 (10%)

Query: 47  IGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQ 106
           +GG+    QQ+++   E  AQI +      + L+ R+  L   ++ I   K++ LQ Q  
Sbjct: 183 VGGI---SQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLD 239

Query: 107 QLYSLLGQFNCLTHQLECTQNKDLANQVSVCL------ERLGSLTL-----KPEDSTVLL 155
            L    GQ +  +      Q   L +   V L      ERL +L       +P ++  L 
Sbjct: 240 TLRQ--GQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLE 297

Query: 156 FEADTITLRQTITTFGSLKTIQIPEH 181
              +   LR+++   G+L T     H
Sbjct: 298 LVLEVDGLRRSVLNLGALLTTSATAH 323


>gi|22027627 TNF receptor-associated factor 5 [Homo sapiens]
          Length = 557

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 31  EPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQV 90
           E L  C +A +D      G       + D  R ++   HS +  H+  +  + V L EQ+
Sbjct: 210 EHLAVCPEAEQDCPFKHYGCA-----VTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQI 264

Query: 91  DLIY---QLKEETLQQQAQQLYSLLGQF 115
             ++   + KE  +QQ A+ +  L  +F
Sbjct: 265 SDLHKSLEQKESKIQQLAETIKKLEKEF 292


>gi|77404348 TNF receptor-associated factor 5 [Homo sapiens]
          Length = 557

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 31  EPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQV 90
           E L  C +A +D      G       + D  R ++   HS +  H+  +  + V L EQ+
Sbjct: 210 EHLAVCPEAEQDCPFKHYGCA-----VTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQI 264

Query: 91  DLIY---QLKEETLQQQAQQLYSLLGQF 115
             ++   + KE  +QQ A+ +  L  +F
Sbjct: 265 SDLHKSLEQKESKIQQLAETIKKLEKEF 292


>gi|11321603 TNF receptor-associated factor 5 [Homo sapiens]
          Length = 557

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 31  EPLLRCSDARRDLELAIGGVLRAEQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQV 90
           E L  C +A +D      G       + D  R ++   HS +  H+  +  + V L EQ+
Sbjct: 210 EHLAVCPEAEQDCPFKHYGCA-----VTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQI 264

Query: 91  DLIY---QLKEETLQQQAQQLYSLLGQF 115
             ++   + KE  +QQ A+ +  L  +F
Sbjct: 265 SDLHKSLEQKESKIQQLAETIKKLEKEF 292


>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
          Length = 825

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
          Length = 789

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
          Length = 798

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
          Length = 798

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
          Length = 819

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
          Length = 801

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 426 CTSFAECVCDENCEKEALYKWLLKKEGKDKNGMPVEPKPEPE-KHKDSLNMW 476
           C +F +    + C +E  Y  + K E +DK   PV+P P    K KD  + W
Sbjct: 649 CRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCW 700


>gi|157952211 zinc finger protein 250 isoform b [Homo sapiens]
          Length = 555

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 551 NTADWVLPGKKMGNLSQLSSGEDKWLLRKK 580
           N     LPG K   +SQL  GED W+L +K
Sbjct: 52  NVVSLGLPGSKPDIISQLERGEDPWVLDRK 81


>gi|45387947 zinc finger protein 250 isoform a [Homo sapiens]
          Length = 560

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 551 NTADWVLPGKKMGNLSQLSSGEDKWLLRKK 580
           N     LPG K   +SQL  GED W+L +K
Sbjct: 57  NVVSLGLPGSKPDIISQLERGEDPWVLDRK 86


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 54   EQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLG 113
            +Q++++ L E++A++     R  +    R+    + +DL  QL+EE   +Q  QL  +  
Sbjct: 917  KQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTA 976

Query: 114  QFNCLTHQLEC----TQNKDLANQVSVCLERLGSLT 145
            +      + E      QN  L+ +  +  ER+  LT
Sbjct: 977  EAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLT 1012


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 54   EQQIKDNLREVKAQIHSCISRHLECLRSREVWLYEQVDLIYQLKEETLQQQAQQLYSLLG 113
            +Q++++ L E++A++     R  +    R+    + +DL  QL+EE   +Q  QL  +  
Sbjct: 924  KQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTA 983

Query: 114  QFNCLTHQLEC----TQNKDLANQVSVCLERLGSLT 145
            +      + E      QN  L+ +  +  ER+  LT
Sbjct: 984  EAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLT 1019


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,067,537
Number of Sequences: 37866
Number of extensions: 1327772
Number of successful extensions: 2825
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2798
Number of HSP's gapped (non-prelim): 51
length of query: 630
length of database: 18,247,518
effective HSP length: 108
effective length of query: 522
effective length of database: 14,157,990
effective search space: 7390470780
effective search space used: 7390470780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.