Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GSS Sequence: fasta or formatted (474aa) NCBI GI: 4504169
Description:

glutathione synthetase

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         50           2
 C cysteine            0.6          3           1
 D aspartate           4.4         21           2
 E glutamate           8.0         38           2
 F phenylalanine       3.6         17           1
 G glycine             6.5         31           3
 H histidine           1.7          8           1
 I isoleucine          4.6         22           1
 K lysine              4.6         22           2
 L leucine            12.4         59           3
 M methionine          1.9          9           1
 N asparagine          3.6         17           2
 P proline             4.4         21           1
 Q glutamine           6.3         30           2
 R arginine            6.1         29           2
 S serine              6.8         32           2
 T threonine           3.6         17           1
 V valine              7.0         33           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione synthetase 
NCOA4                 0.009   nuclear receptor coactivator 4 isoform 3 
NCOA4                 0.009   nuclear receptor coactivator 4 isoform 3 
NCOA4                 0.009   nuclear receptor coactivator 4 isoform 3 
NCOA4                 0.009   nuclear receptor coactivator 4 isoform 2 
NCOA4                 0.009   nuclear receptor coactivator 4 isoform 1 
ODZ1                  0.008   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.008   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.008   odz, odd Oz/ten-m homolog 1 isoform 1 
PRIC285               0.007   PPAR-alpha interacting complex protein 285 isoform ...
PRIC285               0.007   PPAR-alpha interacting complex protein 285 isoform ...
TECPR1                0.006   tectonin beta-propeller repeat containing 1 
IL12B                 0.006   interleukin 12B precursor 
JMJD1C                0.006   jumonji domain containing 1C isoform a 
JMJD1C                0.006   jumonji domain containing 1C isoform b 
SOX1                  0.004   SRY (sex determining region Y)-box 1 
DST                   0.004   dystonin isoform 1eB precursor 
NRK                   0.004   Nik related kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press