Guide to the Human Genome
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Name: HAUS3 Sequence: fasta or formatted (603aa) NCBI GI: 56711324
Description:

HAUS augmin-like complex, subunit 3

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         30           2
 C cysteine            1.2          7           1
 D aspartate           5.6         34           2
 E glutamate          10.1         61           3
 F phenylalanine       3.5         21           2
 G glycine             2.7         16           2
 H histidine           2.2         13           1
 I isoleucine          4.5         27           1
 K lysine              9.5         57           3
 L leucine            14.8         89           3
 M methionine          2.3         14           2
 N asparagine          5.8         35           2
 P proline             1.5          9           1
 Q glutamine           7.8         47           2
 R arginine            3.3         20           2
 S serine              7.6         46           2
 T threonine           5.0         30           1
 V valine              4.8         29           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.5         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HAUS augmin-like complex, subunit 3 
GOLGA4                0.037   golgi autoantigen, golgin subfamily a, 4 
CENPF                 0.031   centromere protein F 
GCC2                  0.030   GRIP and coiled-coil domain-containing 2 
ANKRD26               0.028   ankyrin repeat domain 26 
MYH13                 0.028   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH4                  0.028   myosin, heavy polypeptide 4, skeletal muscle 
CCDC88A               0.027   coiled-coil domain containing 88A isoform 1 
GOLGB1                0.027   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH10                 0.026   myosin, heavy polypeptide 10, non-muscle 
CCDC88A               0.026   coiled-coil domain containing 88A isoform 2 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CNTLN                 0.024   centlein isoform 1 
CCDC18                0.024   sarcoma antigen NY-SAR-41 
AKAP9                 0.024   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.024   A-kinase anchor protein 9 isoform 3 
UACA                  0.023   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.023   uveal autoantigen with coiled-coil domains and ankyr...
CCDC144A              0.023   coiled-coil domain containing 144A 
EEA1                  0.023   early endosome antigen 1, 162kD 
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
ERC1                  0.022   RAB6-interacting protein 2 isoform delta 
TPR                   0.022   nuclear pore complex-associated protein TPR 
CEP110                0.022   centrosomal protein 110kDa 
CCDC147               0.022   coiled-coil domain containing 147 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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