Guide to the Human Genome
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Name: ZNF501 Sequence: fasta or formatted (271aa) NCBI GI: 83776594
Description:

zinc finger protein 501

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         10           1
 C cysteine            8.1         22           1
 D aspartate           0.4          1           1
 E glutamate           8.1         22           1
 F phenylalanine       4.1         11           2
 G glycine             6.6         18           1
 H histidine           7.7         21           1
 I isoleucine          3.7         10           1
 K lysine             10.7         29           2
 L leucine             5.5         15           2
 M methionine          1.5          4           1
 N asparagine          3.0          8           1
 P proline             3.3          9           1
 Q glutamine           7.0         19           1
 R arginine            6.6         18           1
 S serine              9.2         25           2
 T threonine           5.9         16           1
 V valine              1.8          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 501 
ZNF502                0.744   zinc finger protein 502 
ZNF502                0.744   zinc finger protein 502 
ZNF502                0.744   zinc finger protein 502 
ZNF502                0.744   zinc finger protein 502 
ZNF135                0.642   zinc finger protein 135 
ZNF79                 0.621   zinc finger protein 79 
ZFP2                  0.616   zinc finger protein 2 homolog 
ZNF167                0.614   zinc finger protein 167 isoform 1 
ZNF570                0.612   zinc finger protein 570 
ZNF34                 0.610   zinc finger protein 34 
ZNF16                 0.605   zinc finger protein 16 
ZNF16                 0.605   zinc finger protein 16 
ZNF420                0.605   zinc finger protein 420 
ZNF852                0.601   PREDICTED: zinc finger protein 852 
ZNF852                0.601   PREDICTED: zinc finger protein 852 
LOC344065             0.601   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.601   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.601   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF383                0.601   zinc finger protein 383 
ZNF583                0.600   zinc finger protein 583 
ZNF583                0.600   zinc finger protein 583 
ZNF583                0.600   zinc finger protein 583 
ZNF551                0.600   zinc finger protein 551 
LOC647678             0.596   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.596   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.596   PREDICTED: hypothetical protein XP_002343697 
ZNF347                0.596   zinc finger protein 347 
ZNF665                0.596   zinc finger protein 665 
ZNF852                0.596   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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