Guide to the Human Genome
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Name: ZNF8 Sequence: fasta or formatted (575aa) NCBI GI: 188528626
Description:

zinc finger protein 8

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         25           2
 C cysteine            4.0         23           1
 D aspartate           3.8         22           1
 E glutamate           9.2         53           3
 F phenylalanine       3.3         19           1
 G glycine             7.0         40           2
 H histidine           5.7         33           1
 I isoleucine          3.1         18           1
 K lysine              5.6         32           1
 L leucine             6.8         39           2
 M methionine          1.0          6           1
 N asparagine          2.8         16           2
 P proline             6.6         38           2
 Q glutamine           7.0         40           2
 R arginine            7.1         41           3
 S serine              9.2         53           3
 T threonine           6.6         38           2
 V valine              4.0         23           1
 W tryptophan          0.7          4           1
 Y tyrosine            2.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 8 
ZNF135                0.319   zinc finger protein 135 
ZNF184                0.302   zinc finger protein 184 
ZNF570                0.300   zinc finger protein 570 
ZNF583                0.293   zinc finger protein 583 
ZNF583                0.293   zinc finger protein 583 
ZNF583                0.293   zinc finger protein 583 
DKFZp686E2433         0.291   hypothetical protein LOC345462 
ZNF568                0.287   zinc finger protein 568 
ZNF251                0.285   zinc finger protein 251 
ZFP90                 0.285   zinc finger protein 90 
ZNF34                 0.280   zinc finger protein 34 
ZNF12                 0.280   zinc finger protein 12 isoform b 
ZNF470                0.280   zinc finger protein 470 
ZNF582                0.279   zinc finger protein 582 
ZNF10                 0.278   zinc finger protein 10 
ZNF454                0.277   zinc finger protein 454 
ZNF606                0.276   zinc finger protein 606 
ZNF25                 0.274   zinc finger protein 25 
ZNF66                 0.273   PREDICTED: zinc finger protein 66 
ZNF66                 0.273   PREDICTED: zinc finger protein 66 
ZNF66                 0.273   PREDICTED: zinc finger protein 66 
ZNF354C               0.273   zinc finger protein 354C 
ZNF12                 0.271   zinc finger protein 12 isoform a 
ZNF286A               0.270   zinc finger protein 286 
ZNF286A               0.270   zinc finger protein 286 
ZNF624                0.270   zinc finger protein 624 
ZNF543                0.269   zinc finger protein 543 
LOC344065             0.269   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.269   PREDICTED: similar to zinc finger protein 570 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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