Search of human proteins with 223555955

Search of human proteins with 223555955

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223555955 defective in sister chromatid cohesion 1 [Homo
sapiens]
         (393 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223555955 defective in sister chromatid cohesion 1 [Homo sapi...   800   0.0  
gi|20270353 tripartite motif-containing 43 [Homo sapiens]              35   0.15 
gi|55956786 spindle assembly associated Sfi1 homolog isoform a [...    34   0.26 
gi|55956784 spindle assembly associated Sfi1 homolog isoform b [...    34   0.26 
gi|88953346 PREDICTED: Tripartite motif-containing protein 43-li...    33   0.45 
gi|187608545 centrosomal protein 55kDa [Homo sapiens]                  32   0.76 
gi|187608537 centrosomal protein 55kDa [Homo sapiens]                  32   0.76 
gi|21735569 claspin [Homo sapiens]                                     31   1.7  
gi|71061468 centromere protein E [Homo sapiens]                        31   1.7  
gi|29826325 adducin 1 (alpha) isoform d [Homo sapiens]                 30   2.9  
gi|29826323 adducin 1 (alpha) isoform c [Homo sapiens]                 30   2.9  
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]                 30   2.9  
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]                 30   2.9  
gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens]     30   2.9  
gi|154937342 ring finger protein 190 [Homo sapiens]                    30   2.9  
gi|154937340 ring finger protein 190 [Homo sapiens]                    30   2.9  
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              30   3.8  
gi|55956904 mitogen-activated protein kinase kinase kinase 4 iso...    30   4.9  
gi|55956902 mitogen-activated protein kinase kinase kinase 4 iso...    30   4.9  
gi|5174421 copine 6 [Homo sapiens]                                     30   4.9  
gi|219881540 hypothetical protein LOC199870 isoform 4 [Homo sapi...    29   8.4  
gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi...    29   8.4  
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi...    29   8.4  
gi|221139693 hypothetical protein LOC199870 isoform 5 [Homo sapi...    29   8.4  
gi|22749341 hypothetical protein LOC199870 isoform 3 [Homo sapiens]    29   8.4  
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...    29   8.4  

>gi|223555955 defective in sister chromatid cohesion 1 [Homo
           sapiens]
          Length = 393

 Score =  800 bits (2067), Expect = 0.0
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 1   MKRTRDEVDATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFCLLELEPTLCQQLEDGH 60
           MKRTRDEVDATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFCLLELEPTLCQQLEDGH
Sbjct: 1   MKRTRDEVDATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFCLLELEPTLCQQLEDGH 60

Query: 61  SLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLKKEDSHCNIIHTEIFG 120
           SLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLKKEDSHCNIIHTEIFG
Sbjct: 61  SLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLKKEDSHCNIIHTEIFG 120

Query: 121 FSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIM 180
           FSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIM
Sbjct: 121 FSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIM 180

Query: 181 TQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPLNTCLQELGPLEPEE 240
           TQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPLNTCLQELGPLEPEE
Sbjct: 181 TQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPLNTCLQELGPLEPEE 240

Query: 241 MIEHCLKCYGKKYVDEGEVYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVPEGM 300
           MIEHCLKCYGKKYVDEGEVYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVPEGM
Sbjct: 241 MIEHCLKCYGKKYVDEGEVYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVPEGM 300

Query: 301 VTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDL 360
           VTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDL
Sbjct: 301 VTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDL 360

Query: 361 CGEKQTIGALLTKYSHSSMQNGVKVYNSRRPIS 393
           CGEKQTIGALLTKYSHSSMQNGVKVYNSRRPIS
Sbjct: 361 CGEKQTIGALLTKYSHSSMQNGVKVYNSRRPIS 393


>gi|20270353 tripartite motif-containing 43 [Homo sapiens]
          Length = 446

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 37/179 (20%)

Query: 105 KKEDSHC---NIIHTEIFGFSNNYW-ELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNS 160
           K+E  H    N  + EIF      W ++ ++   LK++ + LME  ++ PD +       
Sbjct: 192 KEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELMEMCHK-PDVE------- 243

Query: 161 SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGG-----YWRI----LEFDYEMKLLNHVT 211
                +DL D +  SE  ++   Q +N     G      +R+    +E  +  ++ NH  
Sbjct: 244 ---LLQDLGDIVARSESVLLHMPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNI 300

Query: 212 QLV-DSESWSFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKIC 269
           +L  D  SW F + PLN+   +                +G +    G+ Y+ELD D  C
Sbjct: 301 RLFEDVRSWMFRRGPLNSDRSDY------------FAAWGARVFSFGKHYWELDVDNSC 347


>gi|55956786 spindle assembly associated Sfi1 homolog isoform a [Homo
            sapiens]
          Length = 1242

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 96   PGCKTPDQL----KKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPD 151
            PG  T   L    + E+    ++H +      N W  RR+   L++  +L  E P  GP+
Sbjct: 1139 PGLSTAGSLDLEAELEEIQQQLLHYQTT--KQNLWSCRRQASSLRRWLELNREEP--GPE 1194

Query: 152  SQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNAC 189
             Q+ +     +    ++  QIQ   EE+  Q Q + AC
Sbjct: 1195 DQEVEQQVQKELEQVEM--QIQLLAEELQAQRQPIGAC 1230


>gi|55956784 spindle assembly associated Sfi1 homolog isoform b [Homo
            sapiens]
          Length = 1211

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 96   PGCKTPDQL----KKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPD 151
            PG  T   L    + E+    ++H +      N W  RR+   L++  +L  E P  GP+
Sbjct: 1108 PGLSTAGSLDLEAELEEIQQQLLHYQTT--KQNLWSCRRQASSLRRWLELNREEP--GPE 1163

Query: 152  SQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNAC 189
             Q+ +     +    ++  QIQ   EE+  Q Q + AC
Sbjct: 1164 DQEVEQQVQKELEQVEM--QIQLLAEELQAQRQPIGAC 1199


>gi|88953346 PREDICTED: Tripartite motif-containing protein 43-like
           protein 1 [Homo sapiens]
          Length = 446

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 37/179 (20%)

Query: 105 KKEDSHC---NIIHTEIFGFSNNYW-ELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNS 160
           K+E  H    N  + EIF      W ++ ++   LK++ + LME  ++ P+ +       
Sbjct: 192 KEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELMEMCHK-PEVE------- 243

Query: 161 SKYTTEDLLDQIQASEEEIMTQLQVLNACKIGG-----YWRI----LEFDYEMKLLNHVT 211
                +DL D +  SE  ++   Q +N     G      +R+    +E  +  ++ NH  
Sbjct: 244 ---LLQDLGDIVARSESVLLHMPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNI 300

Query: 212 QLV-DSESWSFGKVPLNTCLQELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKIC 269
           +L  D  SW F + PLN+   +                +G +    G+ Y+ELD D  C
Sbjct: 301 RLFEDVRSWMFRRGPLNSDRSDY------------FAAWGARVFSFGKHYWELDVDNSC 347


>gi|187608545 centrosomal protein 55kDa [Homo sapiens]
          Length = 464

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRR--PKLKKLKKLLMENPYEGPDSQKE-- 155
           T ++LK E +H      EI        +  R R   K++ L+    +N Y+  +  KE  
Sbjct: 26  TLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDKEIQ 85

Query: 156 --KDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNA 188
             +D   ++Y+T  LL+Q++ +  E   + QVL A
Sbjct: 86  RLRDQLKARYSTTALLEQLEETTREGERREQVLKA 120


>gi|187608537 centrosomal protein 55kDa [Homo sapiens]
          Length = 464

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRR--PKLKKLKKLLMENPYEGPDSQKE-- 155
           T ++LK E +H      EI        +  R R   K++ L+    +N Y+  +  KE  
Sbjct: 26  TLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDKEIQ 85

Query: 156 --KDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNA 188
             +D   ++Y+T  LL+Q++ +  E   + QVL A
Sbjct: 86  RLRDQLKARYSTTALLEQLEETTREGERREQVLKA 120


>gi|21735569 claspin [Homo sapiens]
          Length = 1339

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 127  ELRRRRPKLKK---LKKLLM-ENPYEGPD--SQKEKDSNSSKYTTEDLLDQIQASEEEIM 180
            EL +R  KLK+   L+K L  E    G D  S+ E D        ED++D++  S+EE+ 
Sbjct: 1036 ELLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEELQ 1095

Query: 181  TQLQVLN 187
            +Q++ ++
Sbjct: 1096 SQIKKIH 1102


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 128 LRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLN 187
           L+R R ++  LKK L E   E      EKD  +     +DLL ++Q  + E +T++ V +
Sbjct: 345 LKRYRKEIMDLKKQLEEVSLETRAQAMEKDQLAQLLEEKDLLQKVQNEKIENLTRMLVTS 404

Query: 188 A 188
           +
Sbjct: 405 S 405


>gi|29826325 adducin 1 (alpha) isoform d [Homo sapiens]
          Length = 662

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 169 LDQIQASEEEIMTQLQVLNACKIGGYWRILE-FDYEMKLLNHVTQLVDSESWSFGKVPLN 227
           ++ ++ S+     + + L  CK+  ++R+ + F +   + NH+T  V+SE   F  VP  
Sbjct: 127 VNDLRGSDSIAYDKGEKLLRCKLAAFYRLADLFGWSQLIYNHITTRVNSEQEHFLIVPFG 186

Query: 228 TCLQEL 233
               E+
Sbjct: 187 LLYSEV 192


>gi|29826323 adducin 1 (alpha) isoform c [Homo sapiens]
          Length = 631

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 169 LDQIQASEEEIMTQLQVLNACKIGGYWRILE-FDYEMKLLNHVTQLVDSESWSFGKVPLN 227
           ++ ++ S+     + + L  CK+  ++R+ + F +   + NH+T  V+SE   F  VP  
Sbjct: 127 VNDLRGSDSIAYDKGEKLLRCKLAAFYRLADLFGWSQLIYNHITTRVNSEQEHFLIVPFG 186

Query: 228 TCLQEL 233
               E+
Sbjct: 187 LLYSEV 192


>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
          Length = 768

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 169 LDQIQASEEEIMTQLQVLNACKIGGYWRILE-FDYEMKLLNHVTQLVDSESWSFGKVPLN 227
           ++ ++ S+     + + L  CK+  ++R+ + F +   + NH+T  V+SE   F  VP  
Sbjct: 127 VNDLRGSDSIAYDKGEKLLRCKLAAFYRLADLFGWSQLIYNHITTRVNSEQEHFLIVPFG 186

Query: 228 TCLQEL 233
               E+
Sbjct: 187 LLYSEV 192


>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
          Length = 737

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 169 LDQIQASEEEIMTQLQVLNACKIGGYWRILE-FDYEMKLLNHVTQLVDSESWSFGKVPLN 227
           ++ ++ S+     + + L  CK+  ++R+ + F +   + NH+T  V+SE   F  VP  
Sbjct: 127 VNDLRGSDSIAYDKGEKLLRCKLAAFYRLADLFGWSQLIYNHITTRVNSEQEHFLIVPFG 186

Query: 228 TCLQEL 233
               E+
Sbjct: 187 LLYSEV 192


>gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens]
          Length = 1098

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 69/358 (19%), Positives = 139/358 (38%), Gaps = 48/358 (13%)

Query: 46  LELEPTLCQQLEDGHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLK 105
           +EL   + ++L+   S  +     E+ +L    K   +K      +  ++P    PD+L 
Sbjct: 456 IELVQQVAEELQQVESCAVTWYNQEKLILFMVSKDASVKEYIFKELQKYLPSHAVPDELV 515

Query: 106 KED-----SHCNIIHTEIFGFSNNYWELRRRR---------PKLKKLKKLLMENPYEGPD 151
             D     SH  I  +E+     NY  L+             KL+ L K  +  P    D
Sbjct: 516 LIDSLPFTSHGKIDVSELNKIYLNYINLKSENKLSGKEDLWEKLQYLWKSTLNLP---ED 572

Query: 152 SQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNHVT 211
             +  D +    +  D L  I+     ++++++ L    + G   I+     +++ NH+ 
Sbjct: 573 LLRVPDESLFLNSGGDSLKSIR-----LLSEIEKLVGTSVPGLLEIILSSSILEIYNHIL 627

Query: 212 Q-LVDSESWSFGKVPLNTCL--QELGPLEPEEMIEHCLKCYGKKYVDEGEVYFELDADKI 268
           Q +V  E  +F K    +C   ++L  +  EE     L    +K +     + E++A  +
Sbjct: 628 QTVVPDEDVTFRK----SCATKRKLSDINQEEASGTSLH---QKAIMTFTCHNEINAFVV 680

Query: 269 CRAAARMLLQNAVKFNLAEFQEVWQQSVPEGMV--TSLDQLKGL---ALVDRHSRPEIIF 323
               +++L  N+ +F L +       + P   V  T++  LKGL    L+ +   P  + 
Sbjct: 681 LSRGSQILSLNSTRF-LTKLGHC-SSACPSDSVSQTNIQNLKGLNSPVLIGKSKDPSCVA 738

Query: 324 LLKVDDLPEDNQERFNSLFSLREKWTEE-----DIAPYIQDLCGEKQTIGALLTKYSH 376
            +  +  P    ++      L  +W  +     D +P +     +K +    +  +SH
Sbjct: 739 KVSEEGKPAIGTQK----MELHVRWRSDTGKCVDASPLVVIPTFDKSSTTVYIGSHSH 792


>gi|154937342 ring finger protein 190 [Homo sapiens]
          Length = 808

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 222 GKVPLNTCLQELGPLEPEEMI-EHCLKCYGKKYVDEGEVYFELDADKICRAAARMLLQNA 280
           G  P N  L+  G +   + + + CLK + K  +  G    +L A K C    + LL + 
Sbjct: 666 GGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGA---DLGAVKTCEMCKQGLLVDL 722

Query: 281 VKFNLAEFQEVWQQS 295
             FN+ EF +  QQS
Sbjct: 723 GDFNMIEFYQKHQQS 737


>gi|154937340 ring finger protein 190 [Homo sapiens]
          Length = 808

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 222 GKVPLNTCLQELGPLEPEEMI-EHCLKCYGKKYVDEGEVYFELDADKICRAAARMLLQNA 280
           G  P N  L+  G +   + + + CLK + K  +  G    +L A K C    + LL + 
Sbjct: 666 GGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGA---DLGAVKTCEMCKQGLLVDL 722

Query: 281 VKFNLAEFQEVWQQS 295
             FN+ EF +  QQS
Sbjct: 723 GDFNMIEFYQKHQQS 737


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 9/84 (10%)

Query: 103 QLKKEDSHCNIIHTEIFGFSNNYWELRR----RRPKLKKLKKLLMENP---YEGPDSQKE 155
           +L+K +    I+  E+   S+   E+ +    +  +L++LKK+L E     YE  + Q E
Sbjct: 397 RLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYE--NKQFE 454

Query: 156 KDSNSSKYTTEDLLDQIQASEEEI 179
           K +   K T ++L+  +QA E+E+
Sbjct: 455 KIAEELKGTEQELIGLLQAREKEV 478


>gi|55956904 mitogen-activated protein kinase kinase kinase 4
           isoform a [Homo sapiens]
          Length = 1608

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 116 TEIFGFSNNYWELRRRRPKLKKLKKL--LMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQ 173
           T+I G+S ++  L+R+R   +++K++  L+E       S +    +  KY  +D  D++Q
Sbjct: 332 TKIVGYSTHHEHLQRQRVSFEQVKRIMELLEYIEALYPSLQALQKDYEKYAAKDFQDRVQ 391

Query: 174 A 174
           A
Sbjct: 392 A 392


>gi|55956902 mitogen-activated protein kinase kinase kinase 4
           isoform b [Homo sapiens]
          Length = 1558

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 116 TEIFGFSNNYWELRRRRPKLKKLKKL--LMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQ 173
           T+I G+S ++  L+R+R   +++K++  L+E       S +    +  KY  +D  D++Q
Sbjct: 332 TKIVGYSTHHEHLQRQRVSFEQVKRIMELLEYIEALYPSLQALQKDYEKYAAKDFQDRVQ 391

Query: 174 A 174
           A
Sbjct: 392 A 392


>gi|5174421 copine 6 [Homo sapiens]
          Length = 557

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 1/95 (1%)

Query: 109 SHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDL 168
           S   I+  E+ G +N+Y +L  R  KL         +P+       E  S+   + TE +
Sbjct: 138 STITIVAEEVSG-TNDYVQLTFRAYKLDNKDLFSKSDPFMEIYKTNEDQSDQLVWRTEVV 196

Query: 169 LDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYE 203
            + +  S E     L  L +C +    + L +DY+
Sbjct: 197 KNNLNPSWEPFRLSLHSLCSCDVHRPLKFLVYDYD 231


>gi|219881540 hypothetical protein LOC199870 isoform 4 [Homo
           sapiens]
          Length = 278

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 134 KLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACK 190
           K KK+ +L  +  Y+  +SQ     N  + T +++ +Q+QA   E++ Q   L+  K
Sbjct: 213 KEKKITELKADFQYQ--ESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSK 267


>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
           sapiens]
          Length = 312

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 134 KLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACK 190
           K KK+ +L  +  Y+  +SQ     N  + T +++ +Q+QA   E++ Q   L+  K
Sbjct: 247 KEKKITELKADFQYQ--ESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSK 301


>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
           sapiens]
          Length = 341

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 134 KLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACK 190
           K KK+ +L  +  Y+  +SQ     N  + T +++ +Q+QA   E++ Q   L+  K
Sbjct: 276 KEKKITELKADFQYQ--ESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSK 330


>gi|221139693 hypothetical protein LOC199870 isoform 5 [Homo
           sapiens]
          Length = 227

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 134 KLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACK 190
           K KK+ +L  +  Y+  +SQ     N  + T +++ +Q+QA   E++ Q   L+  K
Sbjct: 162 KEKKITELKADFQYQ--ESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSK 216


>gi|22749341 hypothetical protein LOC199870 isoform 3 [Homo sapiens]
          Length = 307

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 134 KLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACK 190
           K KK+ +L  +  Y+  +SQ     N  + T +++ +Q+QA   E++ Q   L+  K
Sbjct: 242 KEKKITELKADFQYQ--ESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSK 296


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 124 NYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQL 183
           N  EL++   ++K+ KK  +E+  +  D   E +   ++   E+ LD + A  EE+  ++
Sbjct: 181 NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEE-LDPLDAYMEEVKEEV 239

Query: 184 QVLNACKIGG 193
           +  N   + G
Sbjct: 240 KKFNMRSVKG 249


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,700,168
Number of Sequences: 37866
Number of extensions: 729287
Number of successful extensions: 2116
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2107
Number of HSP's gapped (non-prelim): 29
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.