Search of human proteins with 223005899

Search of human proteins with 223005899

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223005899 GPN-loop GTPase 1 isoform b [Homo sapiens]
         (362 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223005899 GPN-loop GTPase 1 isoform b [Homo sapiens]               718   0.0  
gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]               672   0.0  
gi|223005901 GPN-loop GTPase 1 isoform c [Homo sapiens]               582   e-166
gi|223005903 GPN-loop GTPase 1 isoform d [Homo sapiens]               531   e-151
gi|21361523 GPN-loop GTPase 3 [Homo sapiens]                           77   2e-14
gi|88759337 ATP binding domain 1 family, member B [Homo sapiens]       75   9e-14
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              39   0.007
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)...    36   0.047
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    36   0.047
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    36   0.047
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    36   0.047
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    36   0.047
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     36   0.061
gi|71773110 apolipoprotein A-IV precursor [Homo sapiens]               33   0.40 
gi|114155142 nuclear pore complex-associated protein TPR [Homo s...    33   0.40 
gi|210032580 SET domain containing 1B [Homo sapiens]                   33   0.40 
gi|19923830 pre-B-cell leukemia homeobox interacting protein 1 [...    33   0.40 
gi|118344454 sperm associated antigen 7 [Homo sapiens]                 33   0.52 
gi|115529449 upstream binding transcription factor, RNA polymera...    33   0.52 
gi|115529451 upstream binding transcription factor, RNA polymera...    33   0.52 
gi|7657671 upstream binding transcription factor, RNA polymerase...    33   0.52 
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    33   0.52 
gi|58331177 ermin, ERM-like protein isoform a [Homo sapiens]           32   0.68 
gi|58331175 ermin, ERM-like protein isoform b [Homo sapiens]           32   0.68 
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]                   32   0.89 
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]                   32   0.89 
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]                   32   0.89 
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]                  32   0.89 
gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo sap...    31   1.5  
gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sap...    31   1.5  

>gi|223005899 GPN-loop GTPase 1 isoform b [Homo sapiens]
          Length = 362

 Score =  718 bits (1853), Expect = 0.0
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 1   MTGHTRSSLPRCTGIVLLIKLRFSERLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRD 60
           MTGHTRSSLPRCTGIVLLIKLRFSERLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRD
Sbjct: 1   MTGHTRSSLPRCTGIVLLIKLRFSERLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRD 60

Query: 61  TVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTW 120
           TVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTW
Sbjct: 61  TVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTW 120

Query: 121 SASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD 180
           SASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD
Sbjct: 121 SASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTD 180

Query: 181 IIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLD 240
           IIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLD
Sbjct: 181 IIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLD 240

Query: 241 ELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDS 300
           ELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDS
Sbjct: 241 ELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDS 300

Query: 301 LSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRN 360
           LSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRN
Sbjct: 301 LSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRN 360

Query: 361 NK 362
           NK
Sbjct: 361 NK 362


>gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]
          Length = 388

 Score =  672 bits (1735), Expect = 0.0
 Identities = 339/343 (98%), Positives = 340/343 (99%)

Query: 20  KLRFSERLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGI 79
           K  F +RLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGI
Sbjct: 46  KTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGI 105

Query: 80  VTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVV 139
           VTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVV
Sbjct: 106 VTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVV 165

Query: 140 IYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQD 199
           IYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQD
Sbjct: 166 IYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQD 225

Query: 200 ALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRP 259
           ALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRP
Sbjct: 226 ALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRP 285

Query: 260 EYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDE 319
           EYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDE
Sbjct: 286 EYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDE 345

Query: 320 EDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 362
           EDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK
Sbjct: 346 EDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 388


>gi|223005901 GPN-loop GTPase 1 isoform c [Homo sapiens]
          Length = 295

 Score =  582 bits (1499), Expect = e-166
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 68  MKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTII 127
           MKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTII
Sbjct: 1   MKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTII 60

Query: 128 TEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFA 187
           TEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFA
Sbjct: 61  TEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFA 120

Query: 188 VEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVT 247
           VEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVT
Sbjct: 121 VEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVT 180

Query: 248 SAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHP 307
           SAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHP
Sbjct: 181 SAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHP 240

Query: 308 SDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 362
           SDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK
Sbjct: 241 SDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 295


>gi|223005903 GPN-loop GTPase 1 isoform d [Homo sapiens]
          Length = 279

 Score =  531 bits (1368), Expect = e-151
 Identities = 270/270 (100%), Positives = 270/270 (100%)

Query: 93  VMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPV 152
           VMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPV
Sbjct: 10  VMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPV 69

Query: 153 TFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLT 212
           TFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLT
Sbjct: 70  TFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLT 129

Query: 213 RSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAE 272
           RSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAE
Sbjct: 130 RSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAE 189

Query: 273 SQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDID 332
           SQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDID
Sbjct: 190 SQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDID 249

Query: 333 HRVTEESHEEPAFQNFMQESMAQYWKRNNK 362
           HRVTEESHEEPAFQNFMQESMAQYWKRNNK
Sbjct: 250 HRVTEESHEEPAFQNFMQESMAQYWKRNNK 279


>gi|21361523 GPN-loop GTPase 3 [Homo sapiens]
          Length = 284

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 12/217 (5%)

Query: 20  KLRFSERLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL--GPNG 77
           K  +   +  H  A      V+NLDPA     +    DIR+ ++  +VM+   L  GPNG
Sbjct: 16  KSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNG 75

Query: 78  GIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALAS-SFP 136
           G+V  +  FA  FD +   +   ++   Y+L D PGQIE++T       + + L    F 
Sbjct: 76  GLVFCMEYFANNFDWLENCLGHVED--DYILFDCPGQIELYTHLPVMKQLVQQLEQWEFR 133

Query: 137 TVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEA 196
              ++++D+        F+S +L A S +   ++P + +M K D++      E  +  + 
Sbjct: 134 VCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDP 193

Query: 197 FQDALNQETT------YVSNLTRSMSLVLDEFYSSLR 227
              +L +++T          LT+++  ++D+ YS +R
Sbjct: 194 DMYSLLEDSTSDLRSKKFKKLTKAICGLIDD-YSMVR 229


>gi|88759337 ATP binding domain 1 family, member B [Homo sapiens]
          Length = 310

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 3/155 (1%)

Query: 31  LHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRF 90
           L A G    V+NLDPA   +P+   +D+ + V   +VM    LGPNGG++  +       
Sbjct: 33  LRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDALRLGPNGGLLYCMEYLEANL 92

Query: 91  DQVMKFIEKAQNMSKYVLIDTPGQIEVFT-WSASGTIITEALASSFPTVVIYVMDTSRST 149
           D +   ++  +    Y L D PGQ+E+ T   A  +I ++          ++++D+   T
Sbjct: 93  DWLRAKLDPLR--GHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCT 150

Query: 150 NPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDH 184
           +P  F+S +  + + +   +LP I +++K D+I+H
Sbjct: 151 DPAKFISVLCTSLATMLHVELPHINLLSKMDLIEH 185


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 5/108 (4%)

Query: 245  QVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPV 304
            +   AA+E E + +PE E ++   A  E+Q + E +E L      V ++   A+    P 
Sbjct: 1942 EAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEAL-----EVEVETQEAEGEAQPE 1996

Query: 305  LHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQES 352
                +     G + E +EEA  ++D ++ +   E  E    +   Q++
Sbjct: 1997 SEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKT 2044



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 252  EYEREYRPEYERLKKSLANAESQQQREQLERLR-------KDMGSVALDAGTAKDSLSPV 304
            E E E +PE E  +   A  E+Q + E +E L        +  G+ A +A  A       
Sbjct: 1894 EAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQ 1953

Query: 305  LHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEE 342
              P   ++      E +EEA  +++D++    E   +E
Sbjct: 1954 TQPESEVIES---QEAEEEAQPESEDVEALEVEVETQE 1988


>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
           [Homo sapiens]
          Length = 731

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 14/132 (10%)

Query: 224 SSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERL 283
           SSL VV  +A    G +       +A E  E   + E E      AN E QQ    L R+
Sbjct: 477 SSLEVVPEAAQNNPGEEV----TETAGEGSESIIKEETEENSHCDANTEMQQI---LTRV 529

Query: 284 RKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTL-DEEDEEADSDTDDIDHRVTEESHEE 342
           R++ G + +    + D L PV   SDL     +  DEE+EE +   DD      EES  E
Sbjct: 530 RQNFGKINVVPQFSGDDLVPV-EVSDLEEELESFSDEEEEEQEQQRDD-----AEESSSE 583

Query: 343 PAFQNFMQESMA 354
           P  +N   ++ A
Sbjct: 584 PEEENVGNDTKA 595


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 245 QVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSL 301
           ++    EE ER+ R E  R ++ L  A  QQQ++Q ++L    G+V+  +GT K  L
Sbjct: 942 EIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKL-SGWGNVSKPSGTTKSLL 997


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
          Length = 1320

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 245  QVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSL 301
            ++    EE ER+ R E  R ++ L  A  QQQ++Q ++L    G+V+  +GT K  L
Sbjct: 969  EIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKL-SGWGNVSKPSGTTKSLL 1024


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
          Length = 1299

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 245  QVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSL 301
            ++    EE ER+ R E  R ++ L  A  QQQ++Q ++L    G+V+  +GT K  L
Sbjct: 948  EIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKL-SGWGNVSKPSGTTKSLL 1003


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
          Length = 1299

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 245  QVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSL 301
            ++    EE ER+ R E  R ++ L  A  QQQ++Q ++L    G+V+  +GT K  L
Sbjct: 948  EIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKL-SGWGNVSKPSGTTKSLL 1003


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 250  AEEYEREYRPEYERLKKSLANA----ESQQQREQLERLRKDMGSVALDAGTAKDSLSPVL 305
            AEE +R      E+  K+L+ A    E+ +Q+ +LERL K   +   D  ++KD +   +
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 306  HPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQY 356
            H  +L  ++  L+++ EE  +  ++++  +      +   +  +Q   AQ+
Sbjct: 1521 H--ELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQF 1569


>gi|71773110 apolipoprotein A-IV precursor [Homo sapiens]
          Length = 396

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 18/175 (10%)

Query: 177 NKTDIIDHSFAVEWMQDFEA-FQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVG--VSA 233
           N  + ++H    E  Q   A FQD L +  TY  +L + +     E +  L      +  
Sbjct: 41  NAKEAVEHLQKSELTQQLNALFQDKLGEVNTYAGDLQKKLVPFATELHERLAKDSEKLKE 100

Query: 234 VLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSL---ANAESQQQREQLERLRKDMGSV 290
            +G  L+EL  ++   A E  ++       L++ L   A+    Q   Q E+LR+ +   
Sbjct: 101 EIGKELEELRARLLPHANEVSQKIGDNLRELQQRLEPYADQLRTQVSTQAEQLRRQLTPY 160

Query: 291 ALDAGTA----KDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHE 341
           A           DSL   L P          DE   + D + +++  R+T  + E
Sbjct: 161 AQRMERVLRENADSLQASLRPH--------ADELKAKIDQNVEELKGRLTPYADE 207



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 23/171 (13%)

Query: 203 QETTYVSNLTRSMSLVLDEFYSSLRVVG--VSAVLGTGLDELFVQVTSAAEEYEREYRPE 260
           Q T Y   + R +    D   +SLR     + A +   ++EL  ++T  A+E++ +    
Sbjct: 156 QLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQT 215

Query: 261 YERLKKSLA-NAESQQQR--EQLERLRKDM--------GSVALDAGTAKDSLSPVLHPSD 309
            E L++SLA  A+  Q++   QLE L   M          ++  A   +  L+P+     
Sbjct: 216 VEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAED-- 273

Query: 310 LILTRGTLDEEDEEADSDTDDIDHRVTEESHE-----EPAFQNFMQESMAQ 355
               RG L    E       ++   + ++  E     EP  +NF +  + Q
Sbjct: 274 ---VRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQ 321


>gi|114155142 nuclear pore complex-associated protein TPR [Homo
            sapiens]
          Length = 2363

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 274  QQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDH 333
            +   E  + L+ D+G +  D  T   S        D+I+    +D +DEE D D +D +H
Sbjct: 1907 EDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIV----IDSDDEEEDDDENDGEH 1962

Query: 334  RVTEESHEE 342
               EE  E+
Sbjct: 1963 EDYEEDEED 1971


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 22/103 (21%), Positives = 46/103 (44%)

Query: 240  DELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKD 299
            D+  ++ +++ +E + E   E +R         +++  + +   R+    + LD+G  +D
Sbjct: 977  DQKRLRPSTSVDEEDEESERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEED 1036

Query: 300  SLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEE 342
                +    +        +EE+EE D D DD D R   E+ +E
Sbjct: 1037 EKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDE 1079


>gi|19923830 pre-B-cell leukemia homeobox interacting protein 1
           [Homo sapiens]
          Length = 731

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 251 EEYEREYRPEYERLK-KSLANAESQQQREQLERLRKDMGSVALD 293
           E+  RE  PE   LK K    AE+Q  R++LER R+ +GSV  D
Sbjct: 368 EQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQD 411


>gi|118344454 sperm associated antigen 7 [Homo sapiens]
          Length = 227

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 24/143 (16%)

Query: 234 VLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALD 293
           +LG+ L  +    +   +E  R+ R +  RLKK L   E QQ+ E  +R+ K++     D
Sbjct: 4   LLGSILSSMEKPPSLGDQETRRKAREQAARLKK-LQEQEKQQKVEFRKRMEKEVSDFIQD 62

Query: 294 AGTAKDSLSP-------VLHPSDLI----LTRGTLDEED----------EEADSDTDDID 332
           +G  K    P       +LH  D++    LT  +  E+D          E A SD +   
Sbjct: 63  SGQIKKKFQPMNKIERSILH--DVVEVAGLTSFSFGEDDDCRYVMIFKKEFAPSDEELDS 120

Query: 333 HRVTEESHEEPAFQNFMQESMAQ 355
           +R  EE   + A +    + +AQ
Sbjct: 121 YRRGEEWDPQKAEEKRKLKELAQ 143


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 250 AEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSD 309
           AEE +++Y+   +   KSL+  +    +E +   RK M    L     K S + +   S+
Sbjct: 582 AEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSM--TKLRGPNPKSSRTTLQSKSE 639

Query: 310 LILTRGTLDEEDEEADSDTDDIDHRVTEESH 340
                    EED+E D D +D D    ++ +
Sbjct: 640 --------SEEDDEEDEDDEDEDEEEEDDEN 662


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 250 AEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSD 309
           AEE +++Y+   +   KSL+  +    +E +   RK M    L     K S + +   S+
Sbjct: 582 AEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSM--TKLRGPNPKSSRTTLQSKSE 639

Query: 310 LILTRGTLDEEDEEADSDTDDIDHRVTEESH 340
                    EED+E D D +D D    ++ +
Sbjct: 640 --------SEEDDEEDEDDEDEDEEEEDDEN 662


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 250 AEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSD 309
           AEE +++Y+   +   KSL+  +    +E +   RK M    L     K S + +   S+
Sbjct: 619 AEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSM--TKLRGPNPKSSRTTLQSKSE 676

Query: 310 LILTRGTLDEEDEEADSDTDDIDHRVTEESH 340
                    EED+E D D +D D    ++ +
Sbjct: 677 --------SEEDDEEDEDDEDEDEEEEDDEN 699


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 248  SAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHP 307
            +A  E ERE   E ERL +  +  E ++Q E L        S A      K   SP   P
Sbjct: 995  AAVSEEEREAEKEAERLMEQASCWEKEEQ-EILSTRANSRQSPAKVQSKNKYLHSPESRP 1053

Query: 308  SD------LILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQ 355
                    L L++ + +EE+EE D + ++ +    E+  EE   +   +E   Q
Sbjct: 1054 VTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQ 1107


>gi|58331177 ermin, ERM-like protein isoform a [Homo sapiens]
          Length = 297

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 17/125 (13%)

Query: 234 VLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQL---------ERLR 284
           ++   + +L +Q TSA E   RE   ++E++  S +N E ++Q+E++         +  R
Sbjct: 102 IVHKAITDLSLQETSADEMTFREGH-QWEKIPLSGSNQEIRRQKERITEQPLKEEEDEDR 160

Query: 285 KDMGSVALDA---GTAKDSLSPVLHPS----DLILTRGTLDEEDEEADSDTDDIDHRVTE 337
           K+ G  A +    G  K S + +LH        +      D++D+  ++D D++     +
Sbjct: 161 KNKGHQAAEIEWLGFRKPSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 220

Query: 338 ESHEE 342
           + HEE
Sbjct: 221 KKHEE 225


>gi|58331175 ermin, ERM-like protein isoform b [Homo sapiens]
          Length = 284

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 17/125 (13%)

Query: 234 VLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQL---------ERLR 284
           ++   + +L +Q TSA E   RE   ++E++  S +N E ++Q+E++         +  R
Sbjct: 89  IVHKAITDLSLQETSADEMTFREGH-QWEKIPLSGSNQEIRRQKERITEQPLKEEEDEDR 147

Query: 285 KDMGSVALDA---GTAKDSLSPVLHPS----DLILTRGTLDEEDEEADSDTDDIDHRVTE 337
           K+ G  A +    G  K S + +LH        +      D++D+  ++D D++     +
Sbjct: 148 KNKGHQAAEIEWLGFRKPSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 207

Query: 338 ESHEE 342
           + HEE
Sbjct: 208 KKHEE 212


>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
          Length = 259

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 270 NAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTD 329
           +AES+ + E+  +L    G  +   G +K     V   +D        D++DEE D + D
Sbjct: 122 DAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAAD-----EDDDDDDEEDDDEDD 176

Query: 330 DIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 362
           D D    EE+ E+   +  ++++ A+  +++N+
Sbjct: 177 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQ 209


>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
          Length = 265

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 270 NAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTD 329
           +AES+ + E+  +L    G  +   G +K     V   +D        D++D+E D D D
Sbjct: 122 DAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAAD------EDDDDDDEEDDDED 175

Query: 330 DIDHRVTEESHEEPAFQNFMQESMAQYWK 358
           D D    +E  EE A     QES  +  K
Sbjct: 176 DDDDDFDDEEAEEKAPVKKGQESFKKQEK 204


>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
          Length = 294

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 270 NAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTD 329
           +AES+ + E+  +L    G  +   G +K     V   +D        D++DEE D + D
Sbjct: 122 DAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAAD-----EDDDDDDEEDDDEDD 176

Query: 330 DIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK 362
           D D    EE+ E+   +  ++++ A+  +++N+
Sbjct: 177 DDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQ 209


>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
          Length = 1342

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 225  SLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLR 284
            +L  VG+S+VLGT             E+ + EY     R + S  +       E+L    
Sbjct: 1176 TLSSVGLSSVLGT-----------EEEDEDEEYEYMNRRRRHSPPHPPRPSSLEELGYEY 1224

Query: 285  KDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEE 323
             D+GS  L A        P LHP  ++ T GT  +ED E
Sbjct: 1225 MDVGS-DLSASLGSTQSCP-LHPVPIMPTAGTTPDEDYE 1261


>gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo
           sapiens]
          Length = 3667

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 273 SQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILT-RGTLDEEDEEADSDTDDI 331
           S++QR Q+  LR       LD  T+KD LSP  HP+D   T R     E  E   +   +
Sbjct: 351 SEEQRVQVTSLRNS----GLDPNTSKDGLSP--HPADTQSTRRRPRHAEQIERTKELAVV 404

Query: 332 DHRV 335
            HRV
Sbjct: 405 THRV 408


>gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo
           sapiens]
          Length = 3707

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 273 SQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILT-RGTLDEEDEEADSDTDDI 331
           S++QR Q+  LR       LD  T+KD LSP  HP+D   T R     E  E   +   +
Sbjct: 391 SEEQRVQVTSLRNS----GLDPNTSKDGLSP--HPADTQSTRRRPRHAEQIERTKELAVV 444

Query: 332 DHRV 335
            HRV
Sbjct: 445 THRV 448


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,770,648
Number of Sequences: 37866
Number of extensions: 547935
Number of successful extensions: 3692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 3454
Number of HSP's gapped (non-prelim): 274
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.