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Search of human proteins with 222418771
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222418771 glycerate kinase isoform 2 [Homo sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222418771 glycerate kinase isoform 2 [Homo sapiens] 472 e-133
gi|31543063 glycerate kinase isoform 1 [Homo sapiens] 340 5e-94
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens] 31 0.80
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ... 31 0.80
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ... 31 0.80
gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 31 1.0
gi|169214874 PREDICTED: hypothetical protein [Homo sapiens] 30 1.8
gi|169215109 PREDICTED: hypothetical protein [Homo sapiens] 30 1.8
gi|169214604 PREDICTED: hypothetical protein [Homo sapiens] 30 1.8
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 30 1.8
gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 29 3.0
gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 29 3.0
gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens] 29 3.0
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 29 4.0
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 29 4.0
gi|21264602 laminin alpha 5 [Homo sapiens] 29 4.0
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 29 4.0
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 28 6.8
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 28 6.8
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 28 6.8
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 28 6.8
gi|210031233 PR domain containing 6 [Homo sapiens] 28 6.8
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 28 8.9
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 28 8.9
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 28 8.9
gi|6912328 dimethylarginine dimethylaminohydrolase 1 isoform 1 [... 28 8.9
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 28 8.9
>gi|222418771 glycerate kinase isoform 2 [Homo sapiens]
Length = 234
Score = 472 bits (1214), Expect = e-133
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS 60
MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS
Sbjct: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS 60
Query: 61 LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM 120
LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM
Sbjct: 61 LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM 120
Query: 121 ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGGEP 180
ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGGEP
Sbjct: 121 ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGGEP 180
Query: 181 HPVRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSGRL 234
HPVRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSGRL
Sbjct: 181 HPVRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSGRL 234
>gi|31543063 glycerate kinase isoform 1 [Homo sapiens]
Length = 523
Score = 340 bits (873), Expect = 5e-94
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS 60
MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS
Sbjct: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESAVGAVLPGPMLHRALS 60
Query: 61 LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM 120
LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM
Sbjct: 61 LDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAM 120
Query: 121 ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGG 178
ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGG
Sbjct: 121 ERAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGG 178
>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
Length = 348
Score = 32.7 bits (73), Expect = 0.28
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 185 CGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPP 218
CGGG C C+W G FP CAR SL PP
Sbjct: 194 CGGGSCSC-CRWSMAGPFP-CARRATCLASLSPP 225
>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 327
Score = 31.2 bits (69), Expect = 0.80
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 44 SAVGAVLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE 99
+ G V GP LH AL D GG +L+VR R R V G G EE
Sbjct: 99 AGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEE 154
>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
sapiens]
Length = 264
Score = 31.2 bits (69), Expect = 0.80
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 44 SAVGAVLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE 99
+ G V GP LH AL D GG +L+VR R R V G G EE
Sbjct: 36 AGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEE 91
>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
sapiens]
Length = 264
Score = 31.2 bits (69), Expect = 0.80
Identities = 21/56 (37%), Positives = 24/56 (42%)
Query: 44 SAVGAVLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE 99
+ G V GP LH AL D GG +L+VR R R V G G EE
Sbjct: 36 AGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEE 91
>gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
Length = 525
Score = 30.8 bits (68), Expect = 1.0
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 3/111 (2%)
Query: 122 RAGKQEMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAEGLTADDLLLVLISGGEPH 181
R GKQ L H A+ + D L + + L+ + + L + G H
Sbjct: 310 REGKQ---LSLHELTINEAAAQFCMRDNTLLLRRVELFSLSRQVARESTYLSSLKGSRLH 366
Query: 182 PVRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSG 232
P GG P Q P+ + P P+S PP P+ + ++SG
Sbjct: 367 PEELGGPPLKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPSLEEDSASLSG 417
>gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 30.0 bits (66), Expect = 1.8
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESA------------VGA 48
+AAA+QV+ L AP+ LL G A LA LA +A++ +SA G
Sbjct: 422 LAAAVQVV--LRDAPVQQLLLEGQRAHLAQQPQLA-RAQEGQDSAEGPRVAVEEELVAGD 478
Query: 49 VLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE----LLGQH 104
V+ + + + G + R R R G G+ VL A ++ +LG
Sbjct: 479 VVVIAHVEDVVEVGAGLELAQARQRELVQR------GPGQRVLDAAYVDDDPTAAVLGLT 532
Query: 105 LVQGVISVPKGIRAAMERAGKQEMLLKPHSRVQ 137
+ G+I P+ +R A+ERA + L+ RV+
Sbjct: 533 ALAGLILRPQPLRPAVERA-LDGLALREEGRVE 564
>gi|169215109 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 30.0 bits (66), Expect = 1.8
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESA------------VGA 48
+AAA+QV+ L AP+ LL G A LA LA +A++ +SA G
Sbjct: 422 LAAAVQVV--LRDAPVQQLLLEGQRAHLAQQPQLA-RAQEGQDSAEGPRVAVEEELVAGD 478
Query: 49 VLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE----LLGQH 104
V+ + + + G + R R R G G+ VL A ++ +LG
Sbjct: 479 VVVIAHVEDVVEVGAGLELAQARQRELVQR------GPGQRVLDAAYVDDDPTAAVLGLT 532
Query: 105 LVQGVISVPKGIRAAMERAGKQEMLLKPHSRVQ 137
+ G+I P+ +R A+ERA + L+ RV+
Sbjct: 533 ALAGLILRPQPLRPAVERA-LDGLALREEGRVE 564
>gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 30.0 bits (66), Expect = 1.8
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 1 MAAALQVLPRLARAPLHPLLWRGSVARLASSMALAEQARQLFESA------------VGA 48
+AAA+QV+ L AP+ LL G A LA LA +A++ +SA G
Sbjct: 422 LAAAVQVV--LRDAPVQQLLLEGQRAHLAQQPQLA-RAQEGQDSAEGPRVAVEEELVAGD 478
Query: 49 VLPGPMLHRALSLDPGGRQLKVRDRNFQLRQNLYLVGFGKAVLGMAAAAEE----LLGQH 104
V+ + + + G + R R R G G+ VL A ++ +LG
Sbjct: 479 VVVIAHVEDVVEVGAGLELAQARQRELVQR------GPGQRVLDAAYVDDDPTAAVLGLT 532
Query: 105 LVQGVISVPKGIRAAMERAGKQEMLLKPHSRVQ 137
+ G+I P+ +R A+ERA + L+ RV+
Sbjct: 533 ALAGLILRPQPLRPAVERA-LDGLALREEGRVE 564
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 151 ALRAALAIQQLAEGLTADDLLLVLISGGEPHPVRCGGGPCGGDCQ-WPHRGQFPQCARLP 209
ALR L + + G A +L +G + V CGG C G CQ +P +G Q P
Sbjct: 12 ALRRWLLLGTVTVGFLAQSVL----AGVKKFDVPCGGRDCSGGCQCYPEKGGRGQPG--P 65
Query: 210 AYPQSLRPP 218
PQ P
Sbjct: 66 VGPQGYNGP 74
>gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 29.3 bits (64), Expect = 3.0
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 116 IRAAMERAGKQEMLLKPHSR---VQVF-EGAEDNLPDRDALRAALAIQQLAEGL----TA 167
+R RAG + L +P SR ++++ E A L D R L GL +
Sbjct: 183 VRGPGVRAGGPDFL-QPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSR 241
Query: 168 DDLLLVLISGGEPHPV-RCGGGPCG 191
L+++ GG P V RCG PCG
Sbjct: 242 SGARLLVLEGGAPGAVLRCGPSPCG 266
>gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 29.3 bits (64), Expect = 3.0
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 116 IRAAMERAGKQEMLLKPHSR---VQVF-EGAEDNLPDRDALRAALAIQQLAEGL----TA 167
+R RAG + L +P SR ++++ E A L D R L GL +
Sbjct: 183 VRGPGVRAGGPDFL-QPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSR 241
Query: 168 DDLLLVLISGGEPHPV-RCGGGPCG 191
L+++ GG P V RCG PCG
Sbjct: 242 SGARLLVLEGGAPGAVLRCGPSPCG 266
>gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens]
Length = 527
Score = 29.3 bits (64), Expect = 3.0
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 116 IRAAMERAGKQEMLLKPHSR---VQVF-EGAEDNLPDRDALRAALAIQQLAEGL----TA 167
+R RAG + L +P SR ++++ E A L D R L GL +
Sbjct: 183 VRGPGVRAGGPDFL-QPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSR 241
Query: 168 DDLLLVLISGGEPHPV-RCGGGPCG 191
L+++ GG P V RCG PCG
Sbjct: 242 SGARLLVLEGGAPGAVLRCGPSPCG 266
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 28.9 bits (63), Expect = 4.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 176 SGGEPHPVRCGGGPCGGDCQ-WPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSG 232
+G + + CGG C G CQ +P +G AR P ++ P P F +SG
Sbjct: 22 AGEKSYGKPCGGQDCSGSCQCFPEKG-----ARGRPGPIGIQGPTGPQGFTGSTGLSG 74
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 28.9 bits (63), Expect = 4.0
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 175 ISGGEPHPVRCGGGPCGGDCQWPHR-GQFPQCAR-LPAYPQSLR--------PPCSPATF 224
+SG + H + CGG PC + P + C+ L +P++L+ P C T
Sbjct: 1833 LSGDQAHRLGCGGSPCSPMPRSPEECRRLRTCSECLARHPRTLQPGDGEASTPRCKWCTN 1892
Query: 225 CEDCAVSGR 233
C + A GR
Sbjct: 1893 CPEGACIGR 1901
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 28.9 bits (63), Expect = 4.0
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 182 PVRCGGGPCG---GDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSG 232
P CG C G C P R P C L PQ+ C P CE+C SG
Sbjct: 1483 PCDCGARLCDELTGQCICPPRTIPPDC--LLCQPQTFG--CHPLVGCEECNCSG 1532
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 28.9 bits (63), Expect = 4.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 176 SGGEPHPVRCGGGPCGGDCQ-WPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAVSG 232
+G + + CGG C G CQ +P +G AR P ++ P P F +SG
Sbjct: 21 AGEKSYGKPCGGQDCSGSCQCFPEKG-----ARGRPGPIGIQGPTGPQGFTGSTGLSG 73
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 28.1 bits (61), Expect = 6.8
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 182 PVRCGGGPCGGDCQWPHRGQFPQCARLPAYPQ--------SLRPPCSPATF 224
P GG P G + W R PQ A P P SLRPP +PATF
Sbjct: 249 PFLPGGPPVGAEA-WARR--VPQPAAPPRRPPQSASSLSASLRPPGAPATF 296
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 28.1 bits (61), Expect = 6.8
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 161 LAEGLTADDLLLVLISGGEPHPVRCGG----GPCGG-DCQWPHRGQ--------FPQCAR 207
L G LLL +GG P+R GG PCG + W R + P +
Sbjct: 260 LRSGTGGTGLLLRSGTGGTGLPLRSGGRGLSSPCGDVEWLWAERKREGRRSEPLRPSVSS 319
Query: 208 LPAYPQSLRPPCSPATFCEDCAVSGR 233
A P C A++C CA R
Sbjct: 320 SCAAVSDAAPGCRSASWCSCCAKESR 345
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 28.1 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 183 VRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAV 230
V C PC C Q C L P LRP C + CE +V
Sbjct: 247 VCCDPSPCEPSCSESSICQPATCVALVCEPVCLRPVCCVQSSCEPPSV 294
>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
sapiens]
Length = 517
Score = 28.1 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 183 VRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAV 230
V C PC C Q C L P LRP C + CE +V
Sbjct: 247 VCCDPSPCEPSCSESSICQPATCVALVCEPVCLRPVCCVQSSCEPPSV 294
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 28.1 bits (61), Expect = 6.8
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 162 AEGLTADDLLLVLISGGEPHPVRCGGGPCGG 192
AE L +L L SG P PV+CGGG GG
Sbjct: 129 AEPLPPKELCLGATSG--PGPVKCGGGGGGG 157
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 27.7 bits (60), Expect = 8.9
Identities = 16/48 (33%), Positives = 18/48 (37%)
Query: 183 VRCGGGPCGGDCQWPHRGQFPQCARLPAYPQSLRPPCSPATFCEDCAV 230
V C PC C Q C L P LRP C + CE +V
Sbjct: 247 VCCDPSPCEPTCSESSICQPATCVALVCEPVCLRPVCCVQSSCEPPSV 294
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 27.7 bits (60), Expect = 8.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 83 LVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAMERAGKQEMLLKP 132
L G G+A AA G LV G+ VP+ RAA G+Q +LL+P
Sbjct: 67 LRGEGQAQAAQGYAAANGWGTVLVSGL--VPQDPRAAPPPGGRQLLLLRP 114
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 27.7 bits (60), Expect = 8.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 83 LVGFGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAMERAGKQEMLLKP 132
L G G+A AA G LV G+ VP+ RAA G+Q +LL+P
Sbjct: 67 LRGEGQAQAAQGYAAANGWGTVLVSGL--VPQDPRAAPPPGGRQLLLLRP 114
>gi|6912328 dimethylarginine dimethylaminohydrolase 1 isoform 1
[Homo sapiens]
Length = 285
Score = 27.7 bits (60), Expect = 8.9
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 86 FGKAVLGMAAAAEELLGQHLVQGVISVPKGIRAAMERAGKQEML----LKPHSRVQVFE- 140
FG+A + A E LGQH ++ KG + RA +Q L L +QV E
Sbjct: 10 FGRATHAVVRALPESLGQHALRSA----KGEEVDVARAERQHQLYVGVLGSKLGLQVVEL 65
Query: 141 GAEDNLPD 148
A+++LPD
Sbjct: 66 PADESLPD 73
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 27.7 bits (60), Expect = 8.9
Identities = 49/193 (25%), Positives = 67/193 (34%), Gaps = 36/193 (18%)
Query: 25 VARLASSMALAEQARQ-----LFESAVGAVLPGPMLHRALSLDPGGRQLKVRDRNFQLRQ 79
+A+ ++AL E A +FE + V G LHRAL L R FQ
Sbjct: 835 LAQAREALALEENATSQKVLDIFEQRLEQVESG--LHRALRLQ----------RFFQQAH 882
Query: 80 NLYLVGFGK------------AVLGMAAAAEELLGQHLVQGVISVPKGIRAAMERAGK-Q 126
GF + A L + A E G +++ G AA+ G+ Q
Sbjct: 883 EWVDEGFARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCQ 942
Query: 127 EMLLKPHSRVQVFEGAEDNLPDRDALRAALAIQQLAE------GLTADDLLLVLISGGEP 180
+ R+Q G E + RA A A+ + LLL G P
Sbjct: 943 ARCQELERRIQQHVGEEASPRGYRRRRADGASSGGAQWGPRSPSPSLSSLLLPSSPGPRP 1002
Query: 181 HPVRCGGGPCGGD 193
P C PCG D
Sbjct: 1003 APSHCSLAPCGED 1015
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,740,307
Number of Sequences: 37866
Number of extensions: 475250
Number of successful extensions: 1218
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 41
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.