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Search of human proteins with 222352147
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222352147 RIIa domain-containing protein [Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222352147 RIIa domain-containing protein [Homo sapiens] 187 2e-48
gi|38348396 hypothetical protein LOC375307 [Homo sapiens] 41 2e-04
gi|8394343 sperm autoantigenic protein 17 [Homo sapiens] 31 0.25
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 29 0.72
gi|4758958 cAMP-dependent protein kinase, regulatory subunit alp... 29 0.93
gi|133778961 testis expressed 15 [Homo sapiens] 27 3.5
gi|51243032 oxysterol-binding protein-like protein 8 isoform b [... 27 3.5
gi|18079218 oxysterol-binding protein-like protein 8 isoform a [... 27 3.5
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be... 27 3.5
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 27 4.6
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 27 4.6
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 27 4.6
gi|24797118 calcium-binding tyrosine phosphorylation-regulated p... 26 6.1
gi|24797116 calcium-binding tyrosine phosphorylation-regulated p... 26 6.1
gi|24797114 calcium-binding tyrosine phosphorylation-regulated p... 26 6.1
gi|24797108 calcium-binding tyrosine phosphorylation-regulated p... 26 6.1
gi|24797112 calcium-binding tyrosine phosphorylation-regulated p... 26 6.1
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 26 7.9
gi|197313654 TBCC domain containing 1 [Homo sapiens] 26 7.9
gi|8922517 TBCC domain containing 1 [Homo sapiens] 26 7.9
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 26 7.9
gi|32469509 zinc finger and BTB domain containing 12 [Homo sapiens] 26 7.9
>gi|222352147 RIIa domain-containing protein [Homo sapiens]
Length = 92
Score = 187 bits (475), Expect = 2e-48
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 METLPGLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKR 60
METLPGLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKR
Sbjct: 1 METLPGLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKR 60
Query: 61 PDNILEFAADYFTDPRLPNKIHMQLIKDKKAA 92
PDNILEFAADYFTDPRLPNKIHMQLIKDKKAA
Sbjct: 61 PDNILEFAADYFTDPRLPNKIHMQLIKDKKAA 92
>gi|38348396 hypothetical protein LOC375307 [Homo sapiens]
Length = 387
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 28 KIQTRIANEKYLRTHKEVEWLISGFFREIFLKRPDNILEFAADYF--TDPRLPN 79
K + R+ + YLR H E LIS F + L++P++++ FAA++F DP P+
Sbjct: 307 KEELRLGHASYLRQHPEAHALISDFLLFLLLRQPEDVVTFAAEFFGPFDPWRPS 360
>gi|8394343 sperm autoantigenic protein 17 [Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 0.25
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 48 LISGFFREIFLKRPDNILEFAADYF 72
L+ G REI ++PDNI FAA YF
Sbjct: 19 LLEGLTREILREQPDNIPAFAAAYF 43
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 29.3 bits (64), Expect = 0.72
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 8 LQRPDPGALSAAQLEQLRKFKIQT--RIANEKYLRTHKEVEWLISGFFREIFLKRPD 62
L PDPG L+ A+LE L + + T ++A E+ L + E L+ RE RP+
Sbjct: 189 LSGPDPGELAPAELEMLSRSLMGTLSKLARERDLGAQRLAELLLE---REPLCLRPE 242
>gi|4758958 cAMP-dependent protein kinase, regulatory subunit
alpha 2 [Homo sapiens]
Length = 404
Score = 28.9 bits (63), Expect = 0.93
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFT 73
L+ G+ E+ ++P +++EFA +YFT
Sbjct: 13 LLQGYTVEVLRQQPPDLVEFAVEYFT 38
>gi|133778961 testis expressed 15 [Homo sapiens]
Length = 2789
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 22 EQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKRPDNILEFAADYFTDPRLPNKI 81
++L K T +K H +EW I+ F + K P + +E+ + T + K+
Sbjct: 303 QELEITKSSTSTIKDKDELDHLALEWQITPSFESLSQKHPQHSVEYEGNIHTSLAIAQKL 362
>gi|51243032 oxysterol-binding protein-like protein 8 isoform b
[Homo sapiens]
Length = 847
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 27 FKIQTRIANEKYLRTHKEVEWLISGFFRE-IFLKRPDN 63
F + + Y R K V+W +SGF+++ LK+P N
Sbjct: 406 FLSEAALEENPYFRLKKVVKWYLSGFYKKPKGLKKPYN 443
>gi|18079218 oxysterol-binding protein-like protein 8 isoform a
[Homo sapiens]
Length = 889
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 27 FKIQTRIANEKYLRTHKEVEWLISGFFRE-IFLKRPDN 63
F + + Y R K V+W +SGF+++ LK+P N
Sbjct: 448 FLSEAALEENPYFRLKKVVKWYLSGFYKKPKGLKKPYN 485
>gi|47132585 cAMP-dependent protein kinase, regulatory subunit
beta 2 [Homo sapiens]
Length = 418
Score = 26.9 bits (58), Expect = 3.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFT 73
L+ GF E+ +P ++LEFA +FT
Sbjct: 12 LLQGFTVEVLRHQPADLLEFALQHFT 37
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 42 HKEVEWLISGFFREIFLKRPDNILEFAADYFTDPRLPNKIHM 83
H L G++R I+ PD+ F DY D RL +H+
Sbjct: 1922 HSLQTMLSVGYYRNIYTP-PDSSTSFIQDYSRDGRLLQTLHL 1962
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 42 HKEVEWLISGFFREIFLKRPDNILEFAADYFTDPRLPNKIHM 83
H L G++R I+ PD+ F DY D RL +H+
Sbjct: 1928 HSLQTMLSVGYYRNIYTP-PDSSTSFIQDYSRDGRLLQTLHL 1968
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 42 HKEVEWLISGFFREIFLKRPDNILEFAADYFTDPRLPNKIHM 83
H L G++R I+ PD+ F DY D RL +H+
Sbjct: 1929 HSLQTMLSVGYYRNIYTP-PDSSTSFIQDYSRDGRLLQTLHL 1969
>gi|24797118 calcium-binding tyrosine phosphorylation-regulated
protein isoform e [Homo sapiens]
Length = 221
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFTD 74
L+ G R + P NI +FAA YF +
Sbjct: 17 LLEGISRAVLKTNPSNINQFAAAYFQE 43
>gi|24797116 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFTD 74
L+ G R + P NI +FAA YF +
Sbjct: 17 LLEGISRAVLKTNPSNINQFAAAYFQE 43
>gi|24797114 calcium-binding tyrosine phosphorylation-regulated
protein isoform b [Homo sapiens]
Length = 475
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFTD 74
L+ G R + P NI +FAA YF +
Sbjct: 17 LLEGISRAVLKTNPSNINQFAAAYFQE 43
>gi|24797108 calcium-binding tyrosine phosphorylation-regulated
protein isoform a [Homo sapiens]
Length = 493
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFTD 74
L+ G R + P NI +FAA YF +
Sbjct: 17 LLEGISRAVLKTNPSNINQFAAAYFQE 43
>gi|24797112 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 LISGFFREIFLKRPDNILEFAADYFTD 74
L+ G R + P NI +FAA YF +
Sbjct: 17 LLEGISRAVLKTNPSNINQFAAAYFQE 43
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 25.8 bits (55), Expect = 7.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 20 QLEQLRKFKIQTRIANEKYLRTHKEVE 46
QLE L+K +++ANEK + K++E
Sbjct: 522 QLEDLKKVSQNSQLANEKLSQLQKQLE 548
>gi|197313654 TBCC domain containing 1 [Homo sapiens]
Length = 557
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 6 GLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTH---------------KEVEWLIS 50
G LQ P P S L ++ + +Q R Y R + K++ WL
Sbjct: 18 GALQVPPPSKFSLHYLRKISTY-VQIRATEGAYPRLYWSTWRHIACGKLQLAKDLAWLYF 76
Query: 51 GFFREIFLKRPDNILEFA 68
F + +K P+ LE++
Sbjct: 77 EIFDSLSMKTPEERLEWS 94
>gi|8922517 TBCC domain containing 1 [Homo sapiens]
Length = 557
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
Query: 6 GLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTH---------------KEVEWLIS 50
G LQ P P S L ++ + +Q R Y R + K++ WL
Sbjct: 18 GALQVPPPSKFSLHYLRKISTY-VQIRATEGAYPRLYWSTWRHIACGKLQLAKDLAWLYF 76
Query: 51 GFFREIFLKRPDNILEFA 68
F + +K P+ LE++
Sbjct: 77 EIFDSLSMKTPEERLEWS 94
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 25.8 bits (55), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 24 LRKFKIQTRIANEKYLRTHKEVE 46
+RKFK IA EKY + +E+E
Sbjct: 2537 MRKFKTPLMIAEEKYRQQKEEIE 2559
>gi|32469509 zinc finger and BTB domain containing 12 [Homo
sapiens]
Length = 459
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 9 QRPDPGALSAAQLEQLR---KFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKRPDNIL 65
Q P A + + QLR +F T +A+ R HK + S F R+ FL P + L
Sbjct: 11 QLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRDQFLLNPSSEL 70
Query: 66 E 66
+
Sbjct: 71 Q 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,598,887
Number of Sequences: 37866
Number of extensions: 122102
Number of successful extensions: 290
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 275
Number of HSP's gapped (non-prelim): 22
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.