Guide to the Human Genome
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Name: OSBPL8 Sequence: fasta or formatted (889aa) NCBI GI: 18079218
Description:

oxysterol-binding protein-like protein 8 isoform a

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [847aa] oxysterol-binding protein-like protein 8 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         37           2
 C cysteine            1.2         11           1
 D aspartate           6.0         53           2
 E glutamate           8.5         76           2
 F phenylalanine       3.6         32           1
 G glycine             5.6         50           2
 H histidine           2.2         20           2
 I isoleucine          4.9         44           2
 K lysine              9.9         88           2
 L leucine             9.4         84           2
 M methionine          1.9         17           1
 N asparagine          3.3         29           2
 P proline             4.7         42           2
 Q glutamine           4.6         41           2
 R arginine            4.0         36           2
 S serine              9.9         88           2
 T threonine           6.3         56           2
 V valine              4.6         41           2
 W tryptophan          1.8         16           1
 Y tyrosine            3.1         28           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol-binding protein-like protein 8 isoform a [... 
OSBPL8                0.954   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL5                0.510   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.394   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.394   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL9                0.120   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.120   oxysterol binding protein-like 9 isoform a 
OSBPL10               0.109   oxysterol-binding protein-like protein 10 
OSBPL11               0.106   oxysterol binding protein-like 11 
OSBPL1A               0.066   oxysterol-binding protein-like 1A isoform A 
OSBPL1A               0.066   oxysterol-binding protein-like 1A isoform B 
OSBPL2                0.061   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.061   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBP                  0.042   oxysterol binding protein 
OSBPL6                0.041   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.041   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL7                0.039   oxysterol-binding protein-like protein 7 
OSBP2                 0.038   oxysterol binding protein 2 isoform a 
OSBPL3                0.037   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.037   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.037   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.037   oxysterol-binding protein-like protein 3 isoform a [...
C12orf12              0.012   hypothetical protein LOC196477 
PELP1                 0.011   proline, glutamic acid and leucine rich protein 1 [...
RGAG4                 0.011   retrotransposon gag domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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