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Search of human proteins with 22218339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22218339 hypothetical protein LOC90362 [Homo sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22218339 hypothetical protein LOC90362 [Homo sapiens] 736 0.0
gi|46391104 hypothetical protein LOC83541 [Homo sapiens] 181 1e-45
gi|108389127 hypothetical protein LOC83541 [Homo sapiens] 181 1e-45
gi|13937401 hypothetical protein LOC83541 [Homo sapiens] 181 1e-45
gi|118200352 hypothetical protein LOC642273 [Homo sapiens] 111 9e-25
gi|117956393 glycine/arginine rich protein 1 [Homo sapiens] 55 1e-07
gi|21359846 prospero homeobox 1 [Homo sapiens] 42 0.001
gi|236462242 potassium voltage-gated channel, KQT-like subfamily... 37 0.028
gi|236462079 potassium voltage-gated channel, KQT-like subfamily... 37 0.028
gi|236461942 potassium voltage-gated channel, KQT-like subfamily... 37 0.028
gi|236461719 potassium voltage-gated channel, KQT-like subfamily... 37 0.028
gi|28373065 potassium voltage-gated channel, KQT-like subfamily,... 37 0.028
gi|46370086 transcription factor 12 isoform c [Homo sapiens] 36 0.063
gi|46370084 transcription factor 12 isoform b [Homo sapiens] 36 0.063
gi|4507391 transcription factor 12 isoform b [Homo sapiens] 36 0.063
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 35 0.11
gi|23308587 N-acetylglutamate synthase [Homo sapiens] 34 0.18
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 34 0.24
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 34 0.24
gi|55741677 SET domain containing 1A [Homo sapiens] 34 0.24
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.24
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 33 0.31
gi|8923040 CDKN2A interacting protein [Homo sapiens] 33 0.41
gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo... 33 0.41
gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo... 33 0.41
gi|150418009 transforming, acidic coiled-coil containing protein... 33 0.54
gi|219842340 growth arrest-specific 2 [Homo sapiens] 32 0.70
gi|29540559 growth arrest-specific 2 [Homo sapiens] 32 0.70
gi|4885253 growth arrest-specific 2 [Homo sapiens] 32 0.70
gi|4506797 ataxin 7 isoform a [Homo sapiens] 32 0.91
>gi|22218339 hypothetical protein LOC90362 [Homo sapiens]
Length = 370
Score = 736 bits (1899), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAK 60
MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAK
Sbjct: 1 MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPNPKRLSAVERLEADKAK 60
Query: 61 YVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEI 120
YVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEI
Sbjct: 61 YVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEI 120
Query: 121 LKNIINSSEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSH 180
LKNIINSSEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSH
Sbjct: 121 LKNIINSSEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSH 180
Query: 181 VGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPE 240
VGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPE
Sbjct: 181 VGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPE 240
Query: 241 ADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARAN 300
ADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARAN
Sbjct: 241 ADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARAN 300
Query: 301 SDIISLNFRSASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQ 360
SDIISLNFRSASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQ
Sbjct: 301 SDIISLNFRSASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQ 360
Query: 361 ARESQKVSHV 370
ARESQKVSHV
Sbjct: 361 ARESQKVSHV 370
>gi|46391104 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 181 bits (458), Expect = 1e-45
Identities = 131/354 (37%), Positives = 180/354 (50%), Gaps = 67/354 (18%)
Query: 12 VKPVSPAGTFTSAVPLRILNKGPDYFRR-QAEPNPKRLSAVERLEADKAKYVKSQEVINA 70
V +SP A+P R+ + P Y R A+ ++ SAVERLEADKAKYVKS V N
Sbjct: 3 VHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANT 62
Query: 71 KQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEILKNIINSSEG 130
+QEPV+P + +P P +R + +P+ + + R L L+IL ++I+ +
Sbjct: 63 RQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCR------RPQLDLDILSSLIDLCDS 116
Query: 131 SSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSA 190
S + +SR P R+E + P R P
Sbjct: 117 PVSPA---EASRT--PGRAEGAG----------RPPPATPPRPPP--------------- 146
Query: 191 ESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGV 250
S+S +R+V V+PL A P P P A+ SP
Sbjct: 147 --------STSAVRRV-DVRPLPASPARPCPSPGP--------AAASSP----------- 178
Query: 251 SRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRS 310
+R P LQRSKSDLS+R+ R AD+ERFFN+CGLDPEE LG+ + ARA+SDI+SL S
Sbjct: 179 ARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPS 238
Query: 311 ASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARES 364
A SS E S + ++ A +RVPYG+S +ERNAR+IKWLY ++QARES
Sbjct: 239 AGPGSS--EGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARES 290
>gi|108389127 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 181 bits (458), Expect = 1e-45
Identities = 131/354 (37%), Positives = 180/354 (50%), Gaps = 67/354 (18%)
Query: 12 VKPVSPAGTFTSAVPLRILNKGPDYFRR-QAEPNPKRLSAVERLEADKAKYVKSQEVINA 70
V +SP A+P R+ + P Y R A+ ++ SAVERLEADKAKYVKS V N
Sbjct: 3 VHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANT 62
Query: 71 KQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEILKNIINSSEG 130
+QEPV+P + +P P +R + +P+ + + R L L+IL ++I+ +
Sbjct: 63 RQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCR------RPQLDLDILSSLIDLCDS 116
Query: 131 SSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSA 190
S + +SR P R+E + P R P
Sbjct: 117 PVSPA---EASRT--PGRAEGAG----------RPPPATPPRPPP--------------- 146
Query: 191 ESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGV 250
S+S +R+V V+PL A P P P A+ SP
Sbjct: 147 --------STSAVRRV-DVRPLPASPARPCPSPGP--------AAASSP----------- 178
Query: 251 SRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRS 310
+R P LQRSKSDLS+R+ R AD+ERFFN+CGLDPEE LG+ + ARA+SDI+SL S
Sbjct: 179 ARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPS 238
Query: 311 ASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARES 364
A SS E S + ++ A +RVPYG+S +ERNAR+IKWLY ++QARES
Sbjct: 239 AGPGSS--EGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARES 290
>gi|13937401 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 181 bits (458), Expect = 1e-45
Identities = 131/354 (37%), Positives = 180/354 (50%), Gaps = 67/354 (18%)
Query: 12 VKPVSPAGTFTSAVPLRILNKGPDYFRR-QAEPNPKRLSAVERLEADKAKYVKSQEVINA 70
V +SP A+P R+ + P Y R A+ ++ SAVERLEADKAKYVKS V N
Sbjct: 3 VHTLSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERLEADKAKYVKSLHVANT 62
Query: 71 KQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKLEILKNIINSSEG 130
+QEPV+P + +P P +R + +P+ + + R L L+IL ++I+ +
Sbjct: 63 RQEPVQPLLSKQPLFSPETRRTVLTPSRRALPGPCR------RPQLDLDILSSLIDLCDS 116
Query: 131 SSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSA 190
S + +SR P R+E + P R P
Sbjct: 117 PVSPA---EASRT--PGRAEGAG----------RPPPATPPRPPP--------------- 146
Query: 191 ESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGV 250
S+S +R+V V+PL A P P P A+ SP
Sbjct: 147 --------STSAVRRV-DVRPLPASPARPCPSPGP--------AAASSP----------- 178
Query: 251 SRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARANSDIISLNFRS 310
+R P LQRSKSDLS+R+ R AD+ERFFN+CGLDPEE LG+ + ARA+SDI+SL S
Sbjct: 179 ARPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPS 238
Query: 311 ASMISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNARIIKWLYSIKQARES 364
A SS E S + ++ A +RVPYG+S +ERNAR+IKWLY ++QARES
Sbjct: 239 AGPGSS--EGGCSRRSSVTVEERARERVPYGVSVVERNARVIKWLYGLRQARES 290
>gi|118200352 hypothetical protein LOC642273 [Homo sapiens]
Length = 321
Score = 111 bits (278), Expect = 9e-25
Identities = 68/151 (45%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Query: 216 PCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVE 275
P + A P P P + A P A P P V RR LQRS+SDLS RY A+ +
Sbjct: 158 PAADPATPETPAPAARSAAPSSVPAAPP-GPEPRVVRRRGLQRSQSDLSSRYSAALAESD 216
Query: 276 RFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSDLR--NDDS 333
FF YCGLDPE +E LG ENF A SD ++L RS S+ +S S+ S D ++
Sbjct: 217 TFFQYCGLDPEVVEALGRENFT-AGSDCVTLKVRSVSVATSGSGFSRHSGGDDEGLQEEE 275
Query: 334 ANDRVPYGISAIERNARIIKWLYSIKQARES 364
++VP S IERNARIIKWLY+ K+A+E+
Sbjct: 276 LIEQVPSTTSVIERNARIIKWLYTCKKAKET 306
>gi|117956393 glycine/arginine rich protein 1 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 1e-07
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 32/215 (14%)
Query: 170 GRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPK 229
GRR P+ R+ + A + +R++ P A P SS A P
Sbjct: 75 GRRLPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGAPRDAAP-SSPASTERPAAS 133
Query: 230 IAAIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELE 289
A +PEA C P LS++ ERFFNYCGL+ +E
Sbjct: 134 GGWAAPQDAPEAAGKRALCPTCSLP--------LSEK--------ERFFNYCGLERALVE 177
Query: 290 NLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSDLRNDD--------------SAN 335
LG E F+ + + S + S ++SD D SA
Sbjct: 178 VLGAERFSPQSWGADASPQAGTSPPPGSGDASDWTSSDRGVDSPGGAGGGGGSEAAGSAR 237
Query: 336 DRVPYGISAIERNARIIKWLYSIKQARESQKVSHV 370
DR P +S +ERNAR+I+WLY ++AR + S V
Sbjct: 238 DRRP-PVSVVERNARVIQWLYGCQRARGPPRESEV 271
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 49 SAVERLEADKAKYVKSQEVINAKQEPVKPAVLAKP-PVCPAAKRALGSP 96
SAVERLEADKAKYVK+ +VI +QE PA+ P P+ P LG P
Sbjct: 16 SAVERLEADKAKYVKTHQVIARRQE---PALRGSPGPLTPHPCNELGPP 61
>gi|21359846 prospero homeobox 1 [Homo sapiens]
Length = 737
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSE--ATDLH 155
L FGN S Q E L L + KN + S + GH P + T
Sbjct: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 480
Query: 156 RHSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAI 215
RH F L YP Q GS G+ ++++ L ++ ++ +R S L
Sbjct: 481 RHPFPLPLMAYPFQSPLG-APSGSFSGK---DRASPESLDLTRDTTSLRTKMSSHHLSHH 536
Query: 216 PCSSSAPP 223
PCS + PP
Sbjct: 537 PCSPAHPP 544
>gi|236462242 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 5 [Homo sapiens]
Length = 822
Score = 37.0 bits (84), Expect = 0.028
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEAT-DLHR 156
L + G K E VQ KL+ L +I S S +S PP E T D
Sbjct: 490 LSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKGSASALALASFQIPPFECEQTSDYQS 549
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLL------EQSAESFLHVSH-----------S 199
++ L + +++ R L E SA++F +S S
Sbjct: 550 PVDSKDLSGSAQNSGCLSRSTSANISRGLQFILTPNEFSAQTFYALSPTMHSQATQVPIS 609
Query: 200 SSDIRKV----TSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPA-------- 247
SD V T + P ++ L P + AI + PE PA
Sbjct: 610 QSDGSAVAATNTIANQINTAPKPAAPTTLQIPPPLPAIKHLPRPETLHPNPAGLQESISD 669
Query: 248 ---CGVSRRPSLQRSKSDLS-DRYFRVDADV--ERFFNYCGLDPEEL-ENLGMENFARAN 300
C V+ + ++Q ++S+L+ DR R D+ E + C + P++L ++L ++N R+
Sbjct: 670 VTTCLVASKENVQVAQSNLTKDRSMRKSFDMGGETLLSVCPMVPKDLGKSLSVQNLIRST 729
Query: 301 SDIISLNFRSASMISSDCEQSQD 323
+ LN + + SS SQD
Sbjct: 730 EE---LNIQLSGSESSGSRGSQD 749
>gi|236462079 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 4 [Homo sapiens]
Length = 951
Score = 37.0 bits (84), Expect = 0.028
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEAT-DLHR 156
L + G K E VQ KL+ L +I S S +S PP E T D
Sbjct: 619 LSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKGSASALALASFQIPPFECEQTSDYQS 678
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLL------EQSAESFLHVSH-----------S 199
++ L + +++ R L E SA++F +S S
Sbjct: 679 PVDSKDLSGSAQNSGCLSRSTSANISRGLQFILTPNEFSAQTFYALSPTMHSQATQVPIS 738
Query: 200 SSDIRKV----TSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPA-------- 247
SD V T + P ++ L P + AI + PE PA
Sbjct: 739 QSDGSAVAATNTIANQINTAPKPAAPTTLQIPPPLPAIKHLPRPETLHPNPAGLQESISD 798
Query: 248 ---CGVSRRPSLQRSKSDLS-DRYFRVDADV--ERFFNYCGLDPEEL-ENLGMENFARAN 300
C V+ + ++Q ++S+L+ DR R D+ E + C + P++L ++L ++N R+
Sbjct: 799 VTTCLVASKENVQVAQSNLTKDRSMRKSFDMGGETLLSVCPMVPKDLGKSLSVQNLIRST 858
Query: 301 SDIISLNFRSASMISSDCEQSQD 323
+ LN + + SS SQD
Sbjct: 859 EE---LNIQLSGSESSGSRGSQD 878
>gi|236461942 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 3 [Homo sapiens]
Length = 942
Score = 37.0 bits (84), Expect = 0.028
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEAT-DLHR 156
L + G K E VQ KL+ L +I S S +S PP E T D
Sbjct: 610 LSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKGSASALALASFQIPPFECEQTSDYQS 669
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLL------EQSAESFLHVSH-----------S 199
++ L + +++ R L E SA++F +S S
Sbjct: 670 PVDSKDLSGSAQNSGCLSRSTSANISRGLQFILTPNEFSAQTFYALSPTMHSQATQVPIS 729
Query: 200 SSDIRKV----TSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPA-------- 247
SD V T + P ++ L P + AI + PE PA
Sbjct: 730 QSDGSAVAATNTIANQINTAPKPAAPTTLQIPPPLPAIKHLPRPETLHPNPAGLQESISD 789
Query: 248 ---CGVSRRPSLQRSKSDLS-DRYFRVDADV--ERFFNYCGLDPEEL-ENLGMENFARAN 300
C V+ + ++Q ++S+L+ DR R D+ E + C + P++L ++L ++N R+
Sbjct: 790 VTTCLVASKENVQVAQSNLTKDRSMRKSFDMGGETLLSVCPMVPKDLGKSLSVQNLIRST 849
Query: 301 SDIISLNFRSASMISSDCEQSQD 323
+ LN + + SS SQD
Sbjct: 850 EE---LNIQLSGSESSGSRGSQD 869
>gi|236461719 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 2 [Homo sapiens]
Length = 923
Score = 37.0 bits (84), Expect = 0.028
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEAT-DLHR 156
L + G K E VQ KL+ L +I S S +S PP E T D
Sbjct: 591 LSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKGSASALALASFQIPPFECEQTSDYQS 650
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLL------EQSAESFLHVSH-----------S 199
++ L + +++ R L E SA++F +S S
Sbjct: 651 PVDSKDLSGSAQNSGCLSRSTSANISRGLQFILTPNEFSAQTFYALSPTMHSQATQVPIS 710
Query: 200 SSDIRKV----TSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPA-------- 247
SD V T + P ++ L P + AI + PE PA
Sbjct: 711 QSDGSAVAATNTIANQINTAPKPAAPTTLQIPPPLPAIKHLPRPETLHPNPAGLQESISD 770
Query: 248 ---CGVSRRPSLQRSKSDLS-DRYFRVDADV--ERFFNYCGLDPEEL-ENLGMENFARAN 300
C V+ + ++Q ++S+L+ DR R D+ E + C + P++L ++L ++N R+
Sbjct: 771 VTTCLVASKENVQVAQSNLTKDRSMRKSFDMGGETLLSVCPMVPKDLGKSLSVQNLIRST 830
Query: 301 SDIISLNFRSASMISSDCEQSQD 323
+ LN + + SS SQD
Sbjct: 831 EE---LNIQLSGSESSGSRGSQD 850
>gi|28373065 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 1 [Homo sapiens]
Length = 932
Score = 37.0 bits (84), Expect = 0.028
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 98 LKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEAT-DLHR 156
L + G K E VQ KL+ L +I S S +S PP E T D
Sbjct: 600 LSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKGSASALALASFQIPPFECEQTSDYQS 659
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLL------EQSAESFLHVSH-----------S 199
++ L + +++ R L E SA++F +S S
Sbjct: 660 PVDSKDLSGSAQNSGCLSRSTSANISRGLQFILTPNEFSAQTFYALSPTMHSQATQVPIS 719
Query: 200 SSDIRKV----TSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPA-------- 247
SD V T + P ++ L P + AI + PE PA
Sbjct: 720 QSDGSAVAATNTIANQINTAPKPAAPTTLQIPPPLPAIKHLPRPETLHPNPAGLQESISD 779
Query: 248 ---CGVSRRPSLQRSKSDLS-DRYFRVDADV--ERFFNYCGLDPEEL-ENLGMENFARAN 300
C V+ + ++Q ++S+L+ DR R D+ E + C + P++L ++L ++N R+
Sbjct: 780 VTTCLVASKENVQVAQSNLTKDRSMRKSFDMGGETLLSVCPMVPKDLGKSLSVQNLIRST 839
Query: 301 SDIISLNFRSASMISSDCEQSQD 323
+ LN + + SS SQD
Sbjct: 840 EE---LNIQLSGSESSGSRGSQD 859
>gi|46370086 transcription factor 12 isoform c [Homo sapiens]
Length = 512
Score = 35.8 bits (81), Expect = 0.063
Identities = 55/237 (23%), Positives = 81/237 (34%), Gaps = 55/237 (23%)
Query: 128 SEGSSSGSGHKHSSRNWPPHRSEATDL----------HRHSFAESLKVYPTQ-------- 169
S+ SS G+ H H ++PPH TD+ HR S + S V +
Sbjct: 91 SQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSD 150
Query: 170 ---GRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPP 226
G R G S G L ++ S H+SS + P + S P P
Sbjct: 151 SILGTRGNAAGSSQTG-DALGKALASIYSPDHTSS------------SFPSNPSTPVGSP 197
Query: 227 KPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCG---- 282
P + P P S SL +S + DR R+D + N+
Sbjct: 198 SPLTGTSQWPRPGGQAPSSP----SYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 253
Query: 283 ------------LDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSD 327
L P +G N S +++ + RSASM+ + E S N +
Sbjct: 254 SLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA-SSRSASMVGTHREDSVSLNGN 309
>gi|46370084 transcription factor 12 isoform b [Homo sapiens]
Length = 682
Score = 35.8 bits (81), Expect = 0.063
Identities = 55/237 (23%), Positives = 81/237 (34%), Gaps = 55/237 (23%)
Query: 128 SEGSSSGSGHKHSSRNWPPHRSEATDL----------HRHSFAESLKVYPTQ-------- 169
S+ SS G+ H H ++PPH TD+ HR S + S V +
Sbjct: 261 SQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSD 320
Query: 170 ---GRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPP 226
G R G S G L ++ S H+SS + P + S P P
Sbjct: 321 SILGTRGNAAGSSQTG-DALGKALASIYSPDHTSS------------SFPSNPSTPVGSP 367
Query: 227 KPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCG---- 282
P + P P S SL +S + DR R+D + N+
Sbjct: 368 SPLTGTSQWPRPGGQAPSSP----SYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 423
Query: 283 ------------LDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSD 327
L P +G N S +++ + RSASM+ + E S N +
Sbjct: 424 SLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA-SSRSASMVGTHREDSVSLNGN 479
>gi|4507391 transcription factor 12 isoform b [Homo sapiens]
Length = 682
Score = 35.8 bits (81), Expect = 0.063
Identities = 55/237 (23%), Positives = 81/237 (34%), Gaps = 55/237 (23%)
Query: 128 SEGSSSGSGHKHSSRNWPPHRSEATDL----------HRHSFAESLKVYPTQ-------- 169
S+ SS G+ H H ++PPH TD+ HR S + S V +
Sbjct: 261 SQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSD 320
Query: 170 ---GRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPP 226
G R G S G L ++ S H+SS + P + S P P
Sbjct: 321 SILGTRGNAAGSSQTG-DALGKALASIYSPDHTSS------------SFPSNPSTPVGSP 367
Query: 227 KPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCG---- 282
P + P P S SL +S + DR R+D + N+
Sbjct: 368 SPLTGTSQWPRPGGQAPSSP----SYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 423
Query: 283 ------------LDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSD 327
L P +G N S +++ + RSASM+ + E S N +
Sbjct: 424 SLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA-SSRSASMVGTHREDSVSLNGN 479
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 35.0 bits (79), Expect = 0.11
Identities = 52/264 (19%), Positives = 94/264 (35%), Gaps = 23/264 (8%)
Query: 126 NSSEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRL 185
+SS SSS S SS + S ++ SF++ K+ + ++ H
Sbjct: 160 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS-AF 218
Query: 186 LEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLP----PKP--KIAAIASMKSP 239
E S + SS ++ +K K +P + P P PKP + I S +
Sbjct: 219 KEPSRDHNKSSKESSKKPKENKPLKEEKIVPKMAFKEPKPMSKEPKPDSNLLTITSGQDK 278
Query: 240 EADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVERFFNYCGLDPEELENLGMENFARA 299
+A P S S ++ K S+ F+ + C D +++++ +
Sbjct: 279 KAPSKRPPISDSEELSAKKRKKSSSEALFKSFSSAPPLILTCSADKKQIKDKSHVKMGKV 338
Query: 300 NSDIISLNFRSASM---------ISSDCEQSQDSNSDLRNDDSANDRVPYGISAIERNAR 350
+ + + +++ SD E++ S SD A+ S R
Sbjct: 339 KIESETSEKKKSTLPPFDDIVDPNDSDVEENISSKSDSEQPSPASSSSSSSSSFTPSQTR 398
Query: 351 -------IIKWLYSIKQARESQKV 367
I+K L+S ES +V
Sbjct: 399 QQGPLRSIMKDLHSDDNEEESDEV 422
>gi|23308587 N-acetylglutamate synthase [Homo sapiens]
Length = 534
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 204 RKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSDL 263
R P + + + S P PP+ A +SP A+ EP+ S RP + +
Sbjct: 38 RAARGTSPGRRLSTAWSQPQPPPEEYAGADDVSQSPVAE--EPSWVPSPRPPVPHESPEP 95
Query: 264 SDRYFRVDADVERFFNYCGLDPEE 287
V D++ F N CG P E
Sbjct: 96 PSGRSLVQRDIQAFLNQCGASPGE 119
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 33.9 bits (76), Expect = 0.24
Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 60 KYVKSQEVINAKQEPVK-PAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKL 118
K + ++V++ + P+K P L P K+ + T + AKT R++ KL
Sbjct: 244 KKLVPRKVVSRESAPIKEPKKLMPKTSLPTVKKLATATTGP---SKAKTSRTPSRDSQKL 300
Query: 119 EILKNIINSS--EGSSSGSGHKHSSRNWPPHRSEATDLHRHSF---AESLKVYPTQGRRS 173
+ N G S G K S P RS ++ HS A S+K P + +
Sbjct: 301 TSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSVKRTPMPDKTA 360
Query: 174 PQEGGSHVGRRLLEQSAESFLHVSHSSS--DIRKVTSVKPLKAIPCSSSAPPLPPKPKIA 231
E R ++A S + K ++ +IP +S++ +P K+
Sbjct: 361 TPE------RPPAPENAPSSKKIPAPDKVPSPEKTLTLGDKASIPGNSTSGKIPAPDKVP 414
Query: 232 AIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVD 271
M +PE P + +L K +R F V+
Sbjct: 415 TPEKMVTPEDKASIPENSIIPEETLTVDKPSTPERVFSVE 454
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 33.9 bits (76), Expect = 0.24
Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 17/220 (7%)
Query: 60 KYVKSQEVINAKQEPVK-PAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGVQRENLKL 118
K + ++V++ + P+K P L P K+ + T + AKT R++ KL
Sbjct: 133 KKLVPRKVVSRESAPIKEPKKLMPKTSLPTVKKLATATTGP---SKAKTSRTPSRDSQKL 189
Query: 119 EILKNIINSS--EGSSSGSGHKHSSRNWPPHRSEATDLHRHSF---AESLKVYPTQGRRS 173
+ N G S G K S P RS ++ HS A S+K P + +
Sbjct: 190 TSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSVKRTPMPDKTA 249
Query: 174 PQEGGSHVGRRLLEQSAESFLHVSHSSS--DIRKVTSVKPLKAIPCSSSAPPLPPKPKIA 231
E R ++A S + K ++ +IP +S++ +P K+
Sbjct: 250 TPE------RPPAPENAPSSKKIPAPDKVPSPEKTLTLGDKASIPGNSTSGKIPAPDKVP 303
Query: 232 AIASMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVD 271
M +PE P + +L K +R F V+
Sbjct: 304 TPEKMVTPEDKASIPENSIIPEETLTVDKPSTPERVFSVE 343
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.9 bits (76), Expect = 0.24
Identities = 47/181 (25%), Positives = 67/181 (37%), Gaps = 31/181 (17%)
Query: 126 NSSEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRL 185
+SS SSS S + S N+P + RH+ YP RR+ +E G
Sbjct: 348 SSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTS------YPP--RRATRE--EPPGAPF 397
Query: 186 LEQSAESF--LHVSHSSSDIRKVTS--VKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEA 241
E +AE F + S+ + + T +P P S + PP PP+P SPE
Sbjct: 398 AENTAERFPPSYTSYLPPEPSRPTDQDYRP----PASEAPPPEPPEPGGGGGGGGPSPER 453
Query: 242 D-------PVEPACGVSRRPSLQRSK------SDLSDRYFRVDADVERFFNYCGLDPEEL 288
+ P PA S P S L R + + F++ D EE
Sbjct: 454 EEVRTSPRPASPARSGSPAPETTNESVPFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEE 513
Query: 289 E 289
E
Sbjct: 514 E 514
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.9 bits (76), Expect = 0.24
Identities = 42/149 (28%), Positives = 57/149 (38%), Gaps = 20/149 (13%)
Query: 126 NSSEGSSSGSGHKHSSRNWPPHRSEA--------TDLHRHSFAESLKVYPTQGRRSPQEG 177
+SS SSSGS S + P + E T + + E PT +R +
Sbjct: 2549 SSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSS 2608
Query: 178 GSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMK 237
S S+ S S SSS +S + SSS+ P P KP A+
Sbjct: 2609 SSSSS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPA 2663
Query: 238 SPEADPVEPACGVSRRP-----SLQRSKS 261
SP+ P P SR P SL+ S+S
Sbjct: 2664 SPKKPP--PGERRSRSPRKPIDSLRDSRS 2690
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 33.5 bits (75), Expect = 0.31
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 128 SEGSSSGSGHKHSSRNWPPHRSEATDLHRHSFAESLKVYPTQGRRSPQEGGSHVGRRLLE 187
S SSS S H S R+W + HS +S Y ++ GS R +
Sbjct: 484 SSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDS---YRSKSHSQSYSRGSSRSRTASK 540
Query: 188 QSAESFLHV---SHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEADPV 244
S+ S S S S RK S P K S P+ +P A +A ++ PV
Sbjct: 541 SSSHSRSRSKSRSSSKSGHRKRASKSPRKTASQLSENKPVKTEPLRATMAQNENVVVQPV 600
>gi|8923040 CDKN2A interacting protein [Homo sapiens]
Length = 580
Score = 33.1 bits (74), Expect = 0.41
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 87 PAAKRAL-GSPTLKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWP 145
P+ KR + G + V +HAKT + +R + + E I S+ S SG+ + S +
Sbjct: 140 PSKKRVIEGKNSSAVEQDHAKTSAKTERASAQQENSSTCIGSAIKSESGNSARSSGIS-- 197
Query: 146 PHRSEATDLHRHSFAESLKVYPTQ------GRRS----PQEGGSHVGRRLLEQSAESFLH 195
S +D R ++S +Q G+ S P + GS LL+ S S H
Sbjct: 198 SQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGKASEAEAPDKHGSASFVSLLKSSVNS--H 255
Query: 196 VSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKPKIAAIASMKSPEAD-PVEPACGVSRRP 254
++ S+ ++ S K S+SA + ++ + S S E + P+ +S +P
Sbjct: 256 MTQSTDSRQQSGSPKKSALEGSSASASQSSSEIEVPLLGSSGSSEVELPL-----LSSKP 310
Query: 255 SLQRSKSDLSDR 266
S + + S L+ +
Sbjct: 311 SSETASSGLTSK 322
>gi|146094508 receptor expressed in lymphoid tissues like 1 [Homo
sapiens]
Length = 271
Score = 33.1 bits (74), Expect = 0.41
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 56 ADKAKYVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGV 111
AD K + + + + PV P+ PPV P G+P V G+H T GV
Sbjct: 131 ADVLKAMVADNSLYDPESPVTPSTPGSPPVSPGPLSPGGTPGKHVCGHHLHTVGGV 186
>gi|146094506 receptor expressed in lymphoid tissues like 1 [Homo
sapiens]
Length = 271
Score = 33.1 bits (74), Expect = 0.41
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 56 ADKAKYVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVFGNHAKTESGV 111
AD K + + + + PV P+ PPV P G+P V G+H T GV
Sbjct: 131 ADVLKAMVADNSLYDPESPVTPSTPGSPPVSPGPLSPGGTPGKHVCGHHLHTVGGV 186
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 32.7 bits (73), Expect = 0.54
Identities = 69/313 (22%), Positives = 108/313 (34%), Gaps = 48/313 (15%)
Query: 38 RRQAEPNPKRLSAVERLEADKAK-YVKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSP 96
R P P L +V + +A + V S E A+ P +A + PAA L SP
Sbjct: 1820 RESPRPGPSMLPSVPKKDAPRVMDKVTSDETRGAEGTESSP--VADDIIQPAAPADLESP 1877
Query: 97 TLKVFGNHAKTESGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNWPPHRSEATDLHR 156
TL H V + + I S + H PP +E
Sbjct: 1878 TLAASSYHGDVVGQVSTDLIAQSI-----------SPAAAHA----GLPPSAAE------ 1916
Query: 157 HSFAESLKVYPTQGRRSPQEGGSHVGRRLLEQSAESFLHVSHSSSDIRKVTSVKPLKAIP 216
H + S +P A+ S S S P+KA P
Sbjct: 1917 HIVSPSAPAGDRVEASTPS----------CPDPAKDLSRSSDSEEAFETPESTTPVKAPP 1966
Query: 217 CSSSAPPLPPKPKIAAIASMKSPEADPVEPACGVSRRPSLQRSKSD-LSDRYFRVDADVE 275
APP PP P++ + S + P EP CG P +SD + FR +
Sbjct: 1967 ----APP-PPPPEVIPEPEV-STQPPPEEPGCGSETVPVPDGPRSDSVEGSPFRPPS--- 2017
Query: 276 RFFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSDLRNDDSAN 335
F+ + + + + G N N +++ F++ +SD + + + R +
Sbjct: 2018 HSFSAVFDEDKPIASSGTYNLDFDNIELVD-TFQTLEPRASDAKNQEGKVNTRR---KST 2073
Query: 336 DRVPYGISAIERN 348
D VP S + R+
Sbjct: 2074 DSVPISKSTLSRS 2086
>gi|219842340 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.70
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 185 LLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAP 222
LL Q AE+ S D K T PLK IPC +SAP
Sbjct: 66 LLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAP 103
>gi|29540559 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.70
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 185 LLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAP 222
LL Q AE+ S D K T PLK IPC +SAP
Sbjct: 66 LLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAP 103
>gi|4885253 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.70
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 185 LLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAP 222
LL Q AE+ S D K T PLK IPC +SAP
Sbjct: 66 LLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAP 103
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 32.0 bits (71), Expect = 0.91
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 60/255 (23%)
Query: 62 VKSQEVINAKQEPVKPAVLAKPPVCPAAKRALGSPTLKVF------GNHAKTE------- 108
++S++V ++ P P+ L+ P P +++ + K GN +
Sbjct: 641 MQSRQVSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTS 700
Query: 109 --SGVQRENLKLEILKNIINSSEGSSSGSGHKHSSRNW---------PPHRSEATDLHRH 157
SG +R+N +++SS SSS S HS ++ PP+ S T H
Sbjct: 701 GGSGKKRKNSS----PLLVHSSSSSSSSSSSSHSMESFRKNCVAHSGPPYPSTVTSSHSI 756
Query: 158 SF------AESLKVYPTQGRRSPQEGG---SHVGRRLLEQSAES------FLH------- 195
A ++ V Q R P G S ++ S++S F+H
Sbjct: 757 GLNCVTNKANAVNVRHDQSGRGPPTGSPAESIKRMSVMVNSSDSTLSLGPFIHQSNELPV 816
Query: 196 -----VSHSSSDIRKVTSVKPLKAIPCSSSAPPLPPKP----KIAAIASMKSPEADPVEP 246
SHS + + K+ K K P SSS KP K+ A+ ++ +
Sbjct: 817 NSHGSFSHSHTPLDKLIG-KKRKCSPSSSSINNSSSKPTKVAKVPAVNNVHMKHTGTIPG 875
Query: 247 ACGVSRRPSLQRSKS 261
A G+ L + K+
Sbjct: 876 AQGLMNSSLLHQPKA 890
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,585,117
Number of Sequences: 37866
Number of extensions: 676073
Number of successful extensions: 3370
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 3230
Number of HSP's gapped (non-prelim): 202
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.