Search of human proteins with 222144315

Search of human proteins with 222144315

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]
         (268 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]       545   e-155
gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens]       499   e-141
gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]       477   e-135
gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]       382   e-106
gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens]       360   e-100
gi|31795535 RAB36, member RAS oncogene family [Homo sapiens]          237   9e-63
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           118   5e-27
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          116   2e-26
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   116   2e-26
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   114   9e-26
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            114   9e-26
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            114   9e-26
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           110   2e-24
gi|19923483 GTPase Rab14 [Homo sapiens]                               108   4e-24
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           108   4e-24
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa...   107   1e-23
gi|50234889 RAB43 protein [Homo sapiens]                              107   1e-23
gi|4758996 Ras-related protein Rab-33A [Homo sapiens]                 105   3e-23
gi|16933567 mel transforming oncogene [Homo sapiens]                  105   4e-23
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa...   105   4e-23
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]          105   5e-23
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          104   9e-23
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      103   1e-22
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]         103   1e-22
gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]         102   4e-22
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        102   5e-22
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 102   5e-22
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]         100   1e-21
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]          100   2e-21
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          99   3e-21

>gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]
          Length = 268

 Score =  545 bits (1405), Expect = e-155
 Identities = 268/268 (100%), Positives = 268/268 (100%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS 120
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS 120

Query: 121 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 180
           VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY
Sbjct: 121 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 180

Query: 181 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 240
           RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD
Sbjct: 181 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 240

Query: 241 ALQVAQEMKTVQRLPSPRALCHPHSSRA 268
           ALQVAQEMKTVQRLPSPRALCHPHSSRA
Sbjct: 241 ALQVAQEMKTVQRLPSPRALCHPHSSRA 268


>gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens]
          Length = 316

 Score =  499 bits (1285), Expect = e-141
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 1/249 (0%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS 120
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVGDLS
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVGDLS 119

Query: 121 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 180
           VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY
Sbjct: 120 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 179

Query: 181 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 240
           RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD
Sbjct: 180 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 239

Query: 241 ALQVAQEMK 249
           ALQVAQEMK
Sbjct: 240 ALQVAQEMK 248


>gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]
          Length = 308

 Score =  477 bits (1228), Expect = e-135
 Identities = 240/249 (96%), Positives = 240/249 (96%), Gaps = 9/249 (3%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS 120
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVGDLS
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVGDLS 119

Query: 121 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 180
           VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY
Sbjct: 120 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 179

Query: 181 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 240
           RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL        TPAQYALMEKD
Sbjct: 180 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALMEKD 231

Query: 241 ALQVAQEMK 249
           ALQVAQEMK
Sbjct: 232 ALQVAQEMK 240


>gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]
          Length = 259

 Score =  382 bits (981), Expect = e-106
 Identities = 191/192 (99%), Positives = 191/192 (99%), Gaps = 1/192 (0%)

Query: 58  MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVG 117
           MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVG
Sbjct: 1   MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVG 59

Query: 118 DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 177
           DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS
Sbjct: 60  DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 119

Query: 178 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM 237
           TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM
Sbjct: 120 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM 179

Query: 238 EKDALQVAQEMK 249
           EKDALQVAQEMK
Sbjct: 180 EKDALQVAQEMK 191


>gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens]
          Length = 251

 Score =  360 bits (924), Expect = e-100
 Identities = 183/192 (95%), Positives = 183/192 (95%), Gaps = 9/192 (4%)

Query: 58  MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVG 117
           MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVG
Sbjct: 1   MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVG 59

Query: 118 DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 177
           DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS
Sbjct: 60  DLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAS 119

Query: 178 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALM 237
           TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL        TPAQYALM
Sbjct: 120 TYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALM 171

Query: 238 EKDALQVAQEMK 249
           EKDALQVAQEMK
Sbjct: 172 EKDALQVAQEMK 183


>gi|31795535 RAB36, member RAS oncogene family [Homo sapiens]
          Length = 333

 Score =  237 bits (604), Expect = 9e-63
 Identities = 116/187 (62%), Positives = 144/187 (77%), Gaps = 1/187 (0%)

Query: 63  PVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLSVG 122
           PV RDRV+A  P+    EA L   + FH +V+ ACQ   TGTVG  K+SKV+VVGDL VG
Sbjct: 77  PVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVG-LKLSKVVVVGDLYVG 135

Query: 123 KTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRG 182
           KT LI+RFCK+ FD++YKATIGVDFE+ERFE+ GIP+SLQ+WDTAGQE+FKCIAS YYRG
Sbjct: 136 KTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRG 195

Query: 183 AQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKDAL 242
           AQ II  F+L DV +LEHT+QWL DAL+EN+  S  +FLVG+KKDL + A     E DA+
Sbjct: 196 AQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAV 255

Query: 243 QVAQEMK 249
            +A+EM+
Sbjct: 256 HLAREMQ 262


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  118 bits (296), Expect = 5e-27
 Identities = 58/136 (42%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           FK I + YYRGA  II+V+++ D  S E+ + W+  ++KEN  + V   L+G+K D+   
Sbjct: 70  FKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-KSIKENASAGVERLLLGNKCDME-- 126

Query: 232 AQYALMEKDALQVAQE 247
           A+  + ++ A ++A+E
Sbjct: 127 AKRKVQKEQADKLARE 142


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  116 bits (291), Expect = 2e-26
 Identities = 56/119 (47%), Positives = 82/119 (68%), Gaps = 1/119 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGK+CL+ RF  DT+ ++Y +TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLST 230
           F+ I S+YYRGA  II+V+++ D  S  + KQWL + +      +V   LVG+K DL+T
Sbjct: 70  FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQE-IDRYASENVNKLLVGNKSDLTT 127


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  116 bits (290), Expect = 2e-26
 Identities = 56/119 (47%), Positives = 82/119 (68%), Gaps = 1/119 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGK+CL+ RF  DT+ ++Y +TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 13  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLST 230
           F+ I S+YYRGA  II+V+++ D  S  + KQWL + +      +V   LVG+K DL+T
Sbjct: 73  FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYASENVNKLLVGNKCDLTT 130


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  114 bits (285), Expect = 9e-26
 Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L+G+K D+   
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250

Query: 232 AQYALMEKDALQVAQE 247
           A+  + ++ A ++A+E
Sbjct: 251 AKRKVQKEQADKLARE 266


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  114 bits (285), Expect = 9e-26
 Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L+G+K D+   
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250

Query: 232 AQYALMEKDALQVAQE 247
           A+  + ++ A ++A+E
Sbjct: 251 AKRKVQKEQADKLARE 266


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  114 bits (285), Expect = 9e-26
 Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L+G+K D+   
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDME-- 250

Query: 232 AQYALMEKDALQVAQE 247
           A+  + ++ A ++A+E
Sbjct: 251 AKRKVQKEQADKLARE 266


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  110 bits (274), Expect = 2e-24
 Identities = 51/141 (36%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTCL+ RF +D F+  + +TIG+DF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ I + YYRGA  I++V+++ +  S ++ K W+ + ++E+  S V   ++G+K D++  
Sbjct: 70  FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRN-IEEHASSDVERMILGNKCDMNDK 128

Query: 232 AQYALMEKDALQVAQEMKTVQ 252
            Q +    + L +   +K ++
Sbjct: 129 RQVSKERGEKLAIDYGIKFLE 149


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  108 bits (271), Expect = 4e-24
 Identities = 55/138 (39%), Positives = 87/138 (63%), Gaps = 3/138 (2%)

Query: 110 ISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQ 169
           I K I++GD+ VGK+CL+++F +  F  +   TIGV+F     EV G    LQ+WDTAGQ
Sbjct: 11  IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 70

Query: 170 ERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLS 229
           ERF+ +  +YYRGA   ++V+++   ++  H   WL DA    +P++V++ L+G+K DL 
Sbjct: 71  ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII-LIGNKADLE 129

Query: 230 TPAQYALMEKDALQVAQE 247
             AQ  +  ++A Q A+E
Sbjct: 130 --AQRDVTYEEAKQFAEE 145


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  108 bits (271), Expect = 4e-24
 Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 4/137 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGK+ L+ RF  +TF  +Y  TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ I STYYRG   +I+V+++    S  + K+WL +  +  D   V   LVG+K D   P
Sbjct: 70  FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD--DVCRILVGNKND--DP 125

Query: 232 AQYALMEKDALQVAQEM 248
            +  +  +DA + A +M
Sbjct: 126 ERKVVETEDAYKFAGQM 142


>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 208

 Score =  107 bits (267), Expect = 1e-23
 Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ +  +Y R + A ++V+++ +V S + T +W+ D   E   S V++ LVG+K DL+  
Sbjct: 75  FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 232 AQYALME 238
            Q ++ E
Sbjct: 134 RQVSIEE 140


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  107 bits (267), Expect = 1e-23
 Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 1/131 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K+++VGD SVGKTC++ RF    F +   +TIGVDF M+  E+ G    LQ+WDTAGQER
Sbjct: 20  KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ I  +YYR A   I+ +++   +S      W+ D +++   S+++  L+G+K DLS  
Sbjct: 80  FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIED-VRKYAGSNIVQLLIGNKSDLSEL 138

Query: 232 AQYALMEKDAL 242
            + +L E  +L
Sbjct: 139 REVSLAEAQSL 149


>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
          Length = 237

 Score =  105 bits (263), Expect = 3e-23
 Identities = 58/140 (41%), Positives = 80/140 (57%), Gaps = 5/140 (3%)

Query: 107 RFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDT 166
           + +I K+IV+GD +VGKTCL  RFC  TF    +ATIGVDF  +  E+ G    +Q+WDT
Sbjct: 33  QIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDT 92

Query: 167 AGQERF-KCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSK 225
           AGQERF K +   YYR   A++ V+++  + S  + K W+ +      P  V   LVG+K
Sbjct: 93  AGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNK 152

Query: 226 KDL----STPAQYALMEKDA 241
            DL      P+  AL   DA
Sbjct: 153 CDLREQIQVPSNLALKFADA 172


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  105 bits (262), Expect = 4e-23
 Identities = 48/141 (34%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTC++ RF +D F+  + +TIG+DF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ I + YYRGA  I++V+++ +  S ++ + W+ + ++E+  + V   ++G+K D++  
Sbjct: 70  FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRN-IEEHASADVEKMILGNKCDVNDK 128

Query: 232 AQYALMEKDALQVAQEMKTVQ 252
            Q +    + L +   +K ++
Sbjct: 129 RQVSKERGEKLALDYGIKFME 149


>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 208

 Score =  105 bits (262), Expect = 4e-23
 Identities = 52/127 (40%), Positives = 80/127 (62%), Gaps = 1/127 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ +  +Y R +   ++V+++ +V S + T +W+ D   E   S V++ LVG+K DL+  
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 232 AQYALME 238
            Q ++ E
Sbjct: 134 RQVSIEE 140


>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
          Length = 208

 Score =  105 bits (261), Expect = 5e-23
 Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 3/140 (2%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ +  +Y R +   ++V+++ ++ S + T +W+ D   E   S V++ LVG+K DL+  
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 232 AQYALMEKDALQVAQEMKTV 251
            Q  + E +  Q A+E+  +
Sbjct: 134 RQITIEEGE--QRAKELSVM 151


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  104 bits (259), Expect = 9e-23
 Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++G+  VGKTCL+ RF +  F     ATIGVDF ++  E+ G    LQ+WDTAGQER
Sbjct: 11  KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTP 231
           F+ I  +YYR A A+I+ +++    S     +WL + +++   + V+  LVG+K DL+  
Sbjct: 71  FRSITQSYYRSANALILTYDITCEESFRCLPEWLRE-IEQYASNKVITVLVGNKIDLAER 129

Query: 232 AQYALMEKDALQVAQEM 248
            + +    +    AQ+M
Sbjct: 130 REVSQQRAEEFSEAQDM 146


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  103 bits (258), Expect = 1e-22
 Identities = 48/117 (41%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           K++++GD  VGKTC++ RF  D F+  + +TIG+DF+++  E+ G    LQ+WDTAGQER
Sbjct: 11  KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDL 228
           F  I ++YYRGA  I++V+++ +  S E+  +WL + + E+    V   L+G+K D+
Sbjct: 71  FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDM 126


>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
          Length = 229

 Score =  103 bits (258), Expect = 1e-22
 Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 1/128 (0%)

Query: 107 RFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDT 166
           R +I K+IV+GD +VGKTCL  RFC   F    +ATIGVDF     E+ G    +QLWDT
Sbjct: 30  RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDT 89

Query: 167 AGQERF-KCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSK 225
           AGQERF K +   YYR   A++ V+++ ++AS      W+ +  +    + +   LVG+K
Sbjct: 90  AGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNK 149

Query: 226 KDLSTPAQ 233
            DL +  Q
Sbjct: 150 CDLRSAIQ 157


>gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]
          Length = 208

 Score =  102 bits (254), Expect = 4e-22
 Identities = 45/106 (42%), Positives = 73/106 (68%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           +++++GD  VGKTCL+ RF  + F  ++ +TIGVDF+M+  EV GI   +Q+WDTAGQER
Sbjct: 10  RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQER 69

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSV 217
           ++ I   YYR AQ I +V++++   S +H  +W++D  +  D +S+
Sbjct: 70  YQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSL 115


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  102 bits (253), Expect = 5e-22
 Identities = 47/117 (40%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           KV+++GD  VGK+ L++RF ++ F+   K+TIGV+F     +V G     Q+WDTAGQER
Sbjct: 13  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDL 228
           ++ I S YYRGA   ++V+++    + E+ ++WL + L+++  S++++ LVG+K DL
Sbjct: 73  YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-LRDHADSNIVIMLVGNKSDL 128


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  102 bits (253), Expect = 5e-22
 Identities = 47/117 (40%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 171
           KV+++GD  VGK+ L++RF ++ F+   K+TIGV+F     +V G     Q+WDTAGQER
Sbjct: 13  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

Query: 172 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDL 228
           ++ I S YYRGA   ++V+++    + E+ ++WL + L+++  S++++ LVG+K DL
Sbjct: 73  YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-LRDHADSNIVIMLVGNKSDL 128


>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
          Length = 213

 Score =  100 bits (250), Expect = 1e-21
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 1/142 (0%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVL-GIPFSLQLWDTAGQE 170
           ++IV+GD +VGK+CLI RF +  F +    T+GVDF     E+  G    LQ+WDTAGQE
Sbjct: 10  RLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQE 69

Query: 171 RFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLST 230
           RF+ I   YYR +   +++F++ +  S ++  +WL +      P  ++  LVG K DL T
Sbjct: 70  RFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDT 129

Query: 231 PAQYALMEKDALQVAQEMKTVQ 252
             Q    E + L  A  MK ++
Sbjct: 130 QRQVTRHEAEKLAAAYGMKYIE 151


>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 5/146 (3%)

Query: 112 KVIVVGDLSVGKTCLINRFCKDTF----DKNYKATIGVDFEMERFEVL-GIPFSLQLWDT 166
           ++IV+GD +VGK+CL++RF +  F          T+GVDF     E+  G    LQLWDT
Sbjct: 10  RLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDT 69

Query: 167 AGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKK 226
           AGQERF+ I  +YYR +    +VF++ +  S EH K WL +A     P  ++  LVG K 
Sbjct: 70  AGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLLVGHKC 129

Query: 227 DLSTPAQYALMEKDALQVAQEMKTVQ 252
           DL++  Q    E + L     MK ++
Sbjct: 130 DLASQRQVTREEAEKLSADCGMKYIE 155


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)

Query: 108 FKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTA 167
           FK+ +VI++G   VGKT L+ RF  DTF +  K+T+GVDF+++  E+ G    LQ+WDTA
Sbjct: 41  FKL-QVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 168 GQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKD 227
           GQERF  I S YYR A+ II+V+++    + +   +W+    K     + LL LVG+K D
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELL-LVGNKLD 158

Query: 228 LSTPAQYALM--EKDALQV 244
             T  +      EK A Q+
Sbjct: 159 CETDREITRQQGEKFAQQI 177


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,529,086
Number of Sequences: 37866
Number of extensions: 449714
Number of successful extensions: 1511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1198
Number of HSP's gapped (non-prelim): 235
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.