Search of human proteins with 222144313

Search of human proteins with 222144313

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]
         (308 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]       623   e-179
gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens]       616   e-177
gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens]       506   e-143
gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]       499   e-141
gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]       477   e-135
gi|31795535 RAB36, member RAS oncogene family [Homo sapiens]          279   2e-75
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           120   2e-27
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           117   1e-26
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   114   8e-26
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            114   8e-26
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            114   8e-26
gi|19923483 GTPase Rab14 [Homo sapiens]                               114   1e-25
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          111   7e-25
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   110   2e-24
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa...   108   5e-24
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]          107   1e-23
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa...   107   2e-23
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           106   3e-23
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      102   4e-22
gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]         102   4e-22
gi|50234889 RAB43 protein [Homo sapiens]                              102   6e-22
gi|16933567 mel transforming oncogene [Homo sapiens]                  101   7e-22
gi|34485714 Ras-related protein Rab-23 [Homo sapiens]                 100   1e-21
gi|34485716 Ras-related protein Rab-23 [Homo sapiens]                 100   1e-21
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...   100   2e-21
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         100   3e-21
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...    99   6e-21
gi|4758996 Ras-related protein Rab-33A [Homo sapiens]                  97   2e-20
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]           97   2e-20
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]         96   4e-20

>gi|222144313 Ras-related protein RAB34 isoform 2 [Homo sapiens]
          Length = 308

 Score =  623 bits (1607), Expect = e-179
 Identities = 308/308 (100%), Positives = 308/308 (100%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV 120
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV 120

Query: 121 GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR 180
           GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR
Sbjct: 121 GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR 180

Query: 181 GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQEMK 240
           GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQEMK
Sbjct: 181 GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQEMK 240

Query: 241 AEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTAS 300
           AEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTAS
Sbjct: 241 AEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTAS 300

Query: 301 KKKPTCCP 308
           KKKPTCCP
Sbjct: 301 KKKPTCCP 308


>gi|222144319 Ras-related protein RAB34 isoform 5 [Homo sapiens]
          Length = 316

 Score =  616 bits (1588), Expect = e-177
 Identities = 308/316 (97%), Positives = 308/316 (97%), Gaps = 8/316 (2%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV 120
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSV 120

Query: 121 GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR 180
           GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR
Sbjct: 121 GKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYR 180

Query: 181 GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALMEKDA 232
           GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL        TPAQYALMEKDA
Sbjct: 181 GAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKDA 240

Query: 233 LQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDD 292
           LQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDD
Sbjct: 241 LQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDD 300

Query: 293 SNLYLTASKKKPTCCP 308
           SNLYLTASKKKPTCCP
Sbjct: 301 SNLYLTASKKKPTCCP 316


>gi|222144317 Ras-related protein RAB34 isoform 4 [Homo sapiens]
          Length = 251

 Score =  506 bits (1303), Expect = e-143
 Identities = 251/251 (100%), Positives = 251/251 (100%)

Query: 58  MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 117
           MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 1   MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60

Query: 118 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 177
           LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 61  LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120

Query: 178 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQ 237
           YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQ
Sbjct: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQ 180

Query: 238 EMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYL 297
           EMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYL
Sbjct: 181 EMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYL 240

Query: 298 TASKKKPTCCP 308
           TASKKKPTCCP
Sbjct: 241 TASKKKPTCCP 251


>gi|222144311 Ras-related protein RAB34 isoform 1 [Homo sapiens]
          Length = 259

 Score =  499 bits (1284), Expect = e-141
 Identities = 251/259 (96%), Positives = 251/259 (96%), Gaps = 8/259 (3%)

Query: 58  MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 117
           MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD
Sbjct: 1   MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 60

Query: 118 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 177
           LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST
Sbjct: 61  LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 120

Query: 178 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALME 229
           YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL        TPAQYALME
Sbjct: 121 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 180

Query: 230 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 289
           KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN
Sbjct: 181 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 240

Query: 290 SDDSNLYLTASKKKPTCCP 308
           SDDSNLYLTASKKKPTCCP
Sbjct: 241 SDDSNLYLTASKKKPTCCP 259


>gi|222144315 Ras-related protein RAB34 isoform 3 [Homo sapiens]
          Length = 268

 Score =  477 bits (1228), Expect = e-135
 Identities = 240/249 (96%), Positives = 240/249 (96%), Gaps = 9/249 (3%)

Query: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60
           MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI
Sbjct: 1   MSHLPGLELRREAPPLLGPLLSPFPLPAGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNI 60

Query: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG-FKISKVIVVGDLS 119
           LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVG FKISKVIVVGDLS
Sbjct: 61  LAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGRFKISKVIVVGDLS 120

Query: 120 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 179
           VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY
Sbjct: 121 VGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYY 180

Query: 180 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALMEKD 231
           RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL        TPAQYALMEKD
Sbjct: 181 RGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKD 240

Query: 232 ALQVAQEMK 240
           ALQVAQEMK
Sbjct: 241 ALQVAQEMK 249


>gi|31795535 RAB36, member RAS oncogene family [Homo sapiens]
          Length = 333

 Score =  279 bits (714), Expect = 2e-75
 Identities = 142/260 (54%), Positives = 184/260 (70%), Gaps = 18/260 (6%)

Query: 63  PVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGK 122
           PV RDRV+A  P+    EA L   + FH +V+ ACQ   TGTVG K+SKV+VVGDL VGK
Sbjct: 77  PVSRDRVIASFPKWYTPEACLQLREHFHGQVSAACQRRNTGTVGLKLSKVVVVGDLYVGK 136

Query: 123 TCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGA 182
           T LI+RFCK+ FD++YKATIGVDFE+ERFE+ GIP+SLQ+WDTAGQE+FKCIAS YYRGA
Sbjct: 137 TSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGA 196

Query: 183 QAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALM--------EKDALQ 234
           Q II  F+L DV +LEHT+QWL DAL+EN+  S  +FL   +  L+        E DA+ 
Sbjct: 197 QVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVH 256

Query: 235 VAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRI----GDVVRINS 290
           +A+EM+AEYW+VS+ TGENV+ FF RVAAL FE +VL +LE+  + R+    GD++++  
Sbjct: 257 LAREMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLERQSSARLQVGNGDLIQMEG 316

Query: 291 DDSNLYLTASKKKPT---CC 307
                  T   K+P+   CC
Sbjct: 317 SPPE---TQESKRPSSLGCC 333


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  120 bits (301), Expect = 2e-27
 Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 18/203 (8%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL------TPAQ 224
           FK I + YYRGA  II+V+++ D  S E+ + W+  ++KEN  + V   L        A+
Sbjct: 70  FKTITTAYYRGAMGIILVYDITDEKSFENIQNWM-KSIKENASAGVERLLLGNKCDMEAK 128

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             + ++ A ++A+E    ++  S+ +  NV E F  +A           L KSG RR G+
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRSGN 180

Query: 285 VVRINSDDSNLYLTASKKKPTCC 307
               N   S    T  KK    C
Sbjct: 181 G---NKPPSTDLKTCDKKNTNKC 200


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  117 bits (293), Expect = 1e-26
 Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 13/201 (6%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGK+ L+ RF  +TF  +Y  TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLT----PAQYA 226
           F+ I STYYRG   +I+V+++    S  + K+WL +  +  D    +L       P +  
Sbjct: 70  FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKV 129

Query: 227 LMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVV 286
           +  +DA + A +M  + +  S+    NV E F  +  L   A     L K   ++  DVV
Sbjct: 130 VETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAK-KDNLAKQQQQQQNDVV 188

Query: 287 RINSDDSNLYLTASKKKPTCC 307
           ++  +        SK+K  CC
Sbjct: 189 KLTKN--------SKRKKRCC 201


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  114 bits (286), Expect = 8e-26
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 15/180 (8%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL------TPAQ 224
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L        A+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDMEAK 252

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             + ++ A ++A+E    ++  S+ +  NV E F  +A           L KSG RR G+
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRSGN 304


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  114 bits (286), Expect = 8e-26
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 15/180 (8%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL------TPAQ 224
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L        A+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDMEAK 252

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             + ++ A ++A+E    ++  S+ +  NV E F  +A           L KSG RR G+
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRSGN 304


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  114 bits (286), Expect = 8e-26
 Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 15/180 (8%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTCLI RF +D F+  Y +TIG+DF++   ++ G    LQ+WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL------TPAQ 224
           FK I + YYRGA  II+ +++ D  S E+ + W+  ++ EN  + V   L        A+
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWM-KSIMENASAGVEHLLLGNKCDMEAK 252

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             + ++ A ++A+E    ++  S+ +  NV E F  +A           L KSG RR G+
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR--------DILLKSGGRRSGN 304


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  114 bits (284), Expect = 1e-25
 Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 5/164 (3%)

Query: 109 ISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQ 168
           I K I++GD+ VGK+CL+++F +  F  +   TIGV+F     EV G    LQ+WDTAGQ
Sbjct: 11  IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 70

Query: 169 ERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL-----TPA 223
           ERF+ +  +YYRGA   ++V+++   ++  H   WL DA    +P++V++ +       A
Sbjct: 71  ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEA 130

Query: 224 QYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFE 267
           Q  +  ++A Q A+E    +   S+ TGENV + F   A   ++
Sbjct: 131 QRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 174


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  111 bits (278), Expect = 7e-25
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 23/206 (11%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGK+CL+ RF  DT+ ++Y +TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ I S+YYRGA  II+V+++ D  S  + KQWL + +      +V   L   +  L  K
Sbjct: 70  FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQE-IDRYASENVNKLLVGNKSDLTTK 128

Query: 231 ------DALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
                  A + A  +   +   S+    NV + F  +A         AE++K    R+G 
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA---------AEIKK----RMGP 175

Query: 285 VVRINSDDSNLYLTASKKKPT---CC 307
                 +  NL + ++  KP    CC
Sbjct: 176 GAASGGERPNLKIDSTPVKPAGGGCC 201


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  110 bits (274), Expect = 2e-24
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGK+CL+ RF  DT+ ++Y +TIGVDF++   E+ G    LQ+WDTAGQER
Sbjct: 13  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ I S+YYRGA  II+V+++ D  S  + KQWL + +      +V   L   +  L  K
Sbjct: 73  FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYASENVNKLLVGNKCDLTTK 131

Query: 231 ------DALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 263
                  A + A  +   +   S+    NV + F  +AA
Sbjct: 132 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAA 170


>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 208

 Score =  108 bits (271), Expect = 5e-24
 Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 7/159 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ +  +Y R + A ++V+++ +V S + T +W+ D   E   S V++ L   +  L +K
Sbjct: 75  FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 231 DALQV------AQEMKAEYWAVSSLTGENVREFFFRVAA 263
             + +      A+E+   +   S+  G NV++ F RVAA
Sbjct: 134 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 172


>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
          Length = 208

 Score =  107 bits (268), Expect = 1e-23
 Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 7/174 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ +  +Y R +   ++V+++ ++ S + T +W+ D   E   S V++ L   +  L +K
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 231 ------DALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSG 278
                 +  Q A+E+   +   S+ TG NV++ F RVA+       + E  K G
Sbjct: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187


>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 208

 Score =  107 bits (266), Expect = 2e-23
 Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 7/159 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++ +G+ SVGKT LI RF  D+FD  Y+ATIG+DF  +   +      LQLWDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ +  +Y R +   ++V+++ +V S + T +W+ D   E   S V++ L   +  L +K
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERG-SDVIIMLVGNKTDLADK 133

Query: 231 DALQV------AQEMKAEYWAVSSLTGENVREFFFRVAA 263
             + +      A+E+   +   S+  G NV++ F RVAA
Sbjct: 134 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 172


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  106 bits (264), Expect = 3e-23
 Identities = 54/158 (34%), Positives = 96/158 (60%), Gaps = 7/158 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTCL+ RF +D F+  + +TIG+DF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ I + YYRGA  I++V+++ +  S ++ K W+ + ++E+  S V   +   +  + +K
Sbjct: 70  FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRN-IEEHASSDVERMILGNKCDMNDK 128

Query: 231 DAL------QVAQEMKAEYWAVSSLTGENVREFFFRVA 262
             +      ++A +   ++   S+ +  NV E FF +A
Sbjct: 129 RQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 166


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  102 bits (254), Expect = 4e-22
 Identities = 53/158 (33%), Positives = 93/158 (58%), Gaps = 7/158 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTC++ RF  D F+  + +TIG+DF+++  E+ G    LQ+WDTAGQER
Sbjct: 11  KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F  I ++YYRGA  I++V+++ +  S E+  +WL + + E+    V   L   +  + +K
Sbjct: 71  FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDMDDK 129

Query: 231 DAL------QVAQEMKAEYWAVSSLTGENVREFFFRVA 262
             +      Q+A+E    ++  S+    N+ + F  +A
Sbjct: 130 RVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLA 167


>gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]
          Length = 208

 Score =  102 bits (254), Expect = 4e-22
 Identities = 45/106 (42%), Positives = 73/106 (68%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           +++++GD  VGKTCL+ RF  + F  ++ +TIGVDF+M+  EV GI   +Q+WDTAGQER
Sbjct: 10  RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSV 216
           ++ I   YYR AQ I +V++++   S +H  +W++D  +  D +S+
Sbjct: 70  YQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSL 115


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  102 bits (253), Expect = 6e-22
 Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 6/158 (3%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K+++VGD SVGKTC++ RF    F +   +TIGVDF M+  E+ G    LQ+WDTAGQER
Sbjct: 20  KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSV-LLFLTPAQYALME 229
           F+ I  +YYR A   I+ +++   +S      W+ D  K    + V LL    +  + + 
Sbjct: 80  FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELR 139

Query: 230 KDALQVAQEMKAEY-----WAVSSLTGENVREFFFRVA 262
           + +L  AQ +   Y        S+    NV E F RVA
Sbjct: 140 EVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 177


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  101 bits (252), Expect = 7e-22
 Identities = 56/187 (29%), Positives = 106/187 (56%), Gaps = 8/187 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++GD  VGKTC++ RF +D F+  + +TIG+DF++   E+ G    LQ+WDTAGQER
Sbjct: 10  KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ I + YYRGA  I++V+++ +  S ++ + W+ + ++E+  + V   +   +  + +K
Sbjct: 70  FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRN-IEEHASADVEKMILGNKCDVNDK 128

Query: 231 DAL------QVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             +      ++A +   ++   S+    NV   FF +A    +A +  +LE +  +    
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR-DIKAKMDKKLEGNSPQGSNQ 187

Query: 285 VVRINSD 291
            V+I  D
Sbjct: 188 GVKITPD 194


>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score =  100 bits (250), Expect = 1e-21
 Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 4/152 (2%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++VVG+ +VGK+ +I R+CK  F K+YK TIGVDF   + +V      L LWDTAGQE 
Sbjct: 11  KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 70

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQY----A 226
           F  I   YYRGAQA ++VF+  D  S E    W    + E      +L            
Sbjct: 71  FDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSC 130

Query: 227 LMEKDALQVAQEMKAEYWAVSSLTGENVREFF 258
           +  ++A  +A+ +K  ++  S     NV E F
Sbjct: 131 IKNEEAEALAKRLKLRFYRTSVKEDLNVNEVF 162


>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score =  100 bits (250), Expect = 1e-21
 Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 4/152 (2%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++VVG+ +VGK+ +I R+CK  F K+YK TIGVDF   + +V      L LWDTAGQE 
Sbjct: 11  KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 70

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQY----A 226
           F  I   YYRGAQA ++VF+  D  S E    W    + E      +L            
Sbjct: 71  FDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSC 130

Query: 227 LMEKDALQVAQEMKAEYWAVSSLTGENVREFF 258
           +  ++A  +A+ +K  ++  S     NV E F
Sbjct: 131 IKNEEAEALAKRLKLRFYRTSVKEDLNVNEVF 162


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score =  100 bits (249), Expect = 2e-21
 Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 23/216 (10%)

Query: 97  CQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGI 156
           C+E  + +   ++ K++ VG+ +VGKT  + RFC+D F     AT+G+D+ ++   V   
Sbjct: 533 CKEESSPSAPDRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVGIDYRVKTLNVDNS 592

Query: 157 PFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSV 216
             +LQLWDTAGQER++CI   ++R A  +I++++L D  S    ++WL+   +       
Sbjct: 593 QVALQLWDTAGQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSVEEAVGDRVP 652

Query: 217 LLFLTPAQYALMEKD-----ALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVL 271
           +L L        E++       Q+A E    ++  S+ +G N +E      +L   A  L
Sbjct: 653 VLLLGNKLDNEKEREVPRGLGEQLATENNLIFYECSAYSGHNTKE------SLLHLARFL 706

Query: 272 AELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCC 307
            E E        D VR    +  + +    KK +CC
Sbjct: 707 KEQE--------DTVR----EDTIQVGHPAKKKSCC 730


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 7/158 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K +V+G    GK+CL+++F ++ F ++   TIGV+F      V G    LQ+WDTAGQER
Sbjct: 10  KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLF------LTPAQ 224
           F+ +  +YYRGA   ++V+++    +      WL DA     P+ V++       L P +
Sbjct: 70  FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVA 262
                 +A + AQE +  +   S+LTGENV E F + A
Sbjct: 130 EVTF-LEASRFAQENELMFLETSALTGENVEEAFLKCA 166


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 19/203 (9%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTF-DKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQE 169
           KV+++GD  VGKTC + +F    F    + AT+G+DF  +   V G+   LQ+WDTAGQE
Sbjct: 31  KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90

Query: 170 RFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL-----TPAQ 224
           RF+ +   YYR AQA+++++++ + +S ++ + WL +  +      V++ L       ++
Sbjct: 91  RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGD 284
             +  +D   +A+E    +   S+ TG NV   F  +A             K    R G 
Sbjct: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------------KELKYRAGH 197

Query: 285 VVRINSDDSNLYLTASKKKPTCC 307
                S     Y+ + KK+ +CC
Sbjct: 198 QADEPSFQIRDYVESQKKRSSCC 220


>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
          Length = 237

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 105 VGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWD 164
           V  +I K+IV+GD +VGKTCL  RFC  TF    +ATIGVDF  +  E+ G    +Q+WD
Sbjct: 32  VQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWD 91

Query: 165 TAGQERF-KCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLAD 206
           TAGQERF K +   YYR   A++ V+++  + S  + K W+ +
Sbjct: 92  TAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE 134


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 11/160 (6%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           K++++G+  VGKTCL+ RF +  F     ATIGVDF ++  E+ G    LQ+WDTAGQER
Sbjct: 11  KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEK 230
           F+ I  +YYR A A+I+ +++    S     +WL + +++   + V+  L   +  L E+
Sbjct: 71  FRSITQSYYRSANALILTYDITCEESFRCLPEWLRE-IEQYASNKVITVLVGNKIDLAER 129

Query: 231 DALQVAQEMKAE--------YWAVSSLTGENVREFFFRVA 262
              +V+Q+   E        Y   S+   +NV + F  +A
Sbjct: 130 --REVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 51/154 (33%), Positives = 90/154 (58%), Gaps = 7/154 (4%)

Query: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQER 170
           KV+++GD  VGK+ L++RF ++ F+   K+TIGV+F     +V G     Q+WDTAGQER
Sbjct: 13  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

Query: 171 FKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQ------ 224
           ++ I S YYRGA   ++V+++    + E+ ++WL + L+++  S++++ L   +      
Sbjct: 73  YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKE-LRDHADSNIVIMLVGNKSDLRHL 131

Query: 225 YALMEKDALQVAQEMKAEYWAVSSLTGENVREFF 258
            A+   +A   A++    +   S+L   NV E F
Sbjct: 132 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,325,609
Number of Sequences: 37866
Number of extensions: 474449
Number of successful extensions: 1586
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1298
Number of HSP's gapped (non-prelim): 219
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.