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Search of human proteins with 22209004
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22209004 popeye protein 2 [Homo sapiens]
(364 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22209004 popeye protein 2 [Homo sapiens] 747 0.0
gi|21359947 popeye protein 3 [Homo sapiens] 299 2e-81
gi|22202606 blood vessel epicardial substance isoform 5 [Homo sa... 148 7e-36
gi|22202608 blood vessel epicardial substance isoform 4 [Homo sa... 148 7e-36
gi|45359846 Ras-GTPase activating protein SH3 domain-binding pro... 37 0.028
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.036
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.047
gi|238859557 regulatory factor X1 [Homo sapiens] 36 0.062
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 35 0.081
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 35 0.081
gi|116284392 mucin 2 precursor [Homo sapiens] 35 0.14
gi|154146199 sal-like 3 [Homo sapiens] 35 0.14
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.18
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.18
gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 34 0.18
gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 34 0.18
gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 34 0.18
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens] 34 0.18
gi|18426973 DR1-associated protein 1 [Homo sapiens] 34 0.23
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|54860079 nadrin isoform 1 [Homo sapiens] 34 0.23
gi|54860105 nadrin isoform 2 [Homo sapiens] 34 0.23
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 33 0.31
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 33 0.40
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 33 0.40
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 33 0.40
gi|22748999 hypothetical protein LOC147685 [Homo sapiens] 33 0.40
gi|7706501 WW domain binding protein 11 [Homo sapiens] 33 0.40
gi|226498192 atonal homolog 8 [Homo sapiens] 33 0.52
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 33 0.52
>gi|22209004 popeye protein 2 [Homo sapiens]
Length = 364
Score = 747 bits (1929), Expect = 0.0
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MSANSSRVGQLLLQGSACIRWKQDVEGAVYHLANCLLLLGFMGGSGVYGCFYLFGFLSAG 60
MSANSSRVGQLLLQGSACIRWKQDVEGAVYHLANCLLLLGFMGGSGVYGCFYLFGFLSAG
Sbjct: 1 MSANSSRVGQLLLQGSACIRWKQDVEGAVYHLANCLLLLGFMGGSGVYGCFYLFGFLSAG 60
Query: 61 YLCCVLWGWFSACGLDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQ 120
YLCCVLWGWFSACGLDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQ
Sbjct: 61 YLCCVLWGWFSACGLDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQ 120
Query: 121 VPLQTYKEIVHCCEEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPY 180
VPLQTYKEIVHCCEEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPY
Sbjct: 121 VPLQTYKEIVHCCEEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPY 180
Query: 181 QFMDSPEWESLQPSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYD 240
QFMDSPEWESLQPSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYD
Sbjct: 181 QFMDSPEWESLQPSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYD 240
Query: 241 ISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQAT 300
ISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQAT
Sbjct: 241 ISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQAT 300
Query: 301 PTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTH 360
PTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTH
Sbjct: 301 PTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTH 360
Query: 361 TPEL 364
TPEL
Sbjct: 361 TPEL 364
>gi|21359947 popeye protein 3 [Homo sapiens]
Length = 291
Score = 299 bits (766), Expect = 2e-81
Identities = 137/273 (50%), Positives = 188/273 (68%), Gaps = 2/273 (0%)
Query: 1 MSANSSRVGQLLLQGSACIRWKQDVEGAVYHLANCLLLLGFMGGSGVYGCFYLFGFLSAG 60
M NSS L+ + C WKQ+ EGA+YHLA+ L ++GFMGGSG +G Y+F L G
Sbjct: 1 MERNSSLWKNLIDEHPVCTTWKQEAEGAIYHLASILFVVGFMGGSGFFGLLYVFSLLGLG 60
Query: 61 YLCCVLWGWFSACGLDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQ 120
+LC +W W C DI W+F+L V+C +Q H+ Y++R T EF +LY +L PL
Sbjct: 61 FLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVRSITFAREFQVLYSSLFQPLG 120
Query: 121 VPLQTYKEIVHCCEEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPY 180
+ L ++ I +V+TL E YA++G+T I++LSLL+SGR+RV+ DG+FLHYIFP
Sbjct: 121 ISLPVFRTIA--LSSEVVTLEKEHCYAMQGKTSIDKLSLLVSGRIRVTVDGEFLHYIFPL 178
Query: 181 QFMDSPEWESLQPSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYD 240
QF+DSPEW+SL+P+EEG+FQVTLTAET C Y+SW RK L+LL + RYIS LFS L+G D
Sbjct: 179 QFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSVLIGSD 238
Query: 241 ISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLGP 273
I++KLY LND+++ +DIRLP+ Y + P
Sbjct: 239 IADKLYALNDRVYIGKRYHYDIRLPNFYQMSTP 271
>gi|22202606 blood vessel epicardial substance isoform 5 [Homo
sapiens]
Length = 360
Score = 148 bits (374), Expect = 7e-36
Identities = 82/238 (34%), Positives = 138/238 (57%), Gaps = 6/238 (2%)
Query: 16 SACIRWKQDVEGAVYHLANCLLLLGFMGGSGVY-GCFYLFGFLSAGYLCCVLWGWFSACG 74
+ C W++ + V+H+AN +G + + ++ +L G L+ G ++W C
Sbjct: 32 TTCENWRE-IHHLVFHVANICFAVGLVIPTTLHLHMIFLRGMLTLGCTLYIVWATLYRCA 90
Query: 75 LDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQVPLQTYKEIV-HCC 133
LDI++W+ + V +L L++L+Y+ R + +E +Y+ L PL+VP ++ + C
Sbjct: 91 LDIMIWNSVFLGVNILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLTGQFC 150
Query: 134 EEQVLTLATEQTYAVEGETPIN-RLSLLLSGRVRVSQDGQFLHYIFPYQFMDSPEWESLQ 192
+ TL QTYA E +T ++ RLS+LL G+++VS G FLH I+P F+DSPE+ S Q
Sbjct: 151 --MIQTLKKGQTYAAEDKTSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRSTQ 208
Query: 193 PSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYDISEKLYTLND 250
+ FQVT+ A+ +C ++ W R+ L L E ++ +F L+G DI+ KLY+LND
Sbjct: 209 MHKGEKFQVTIIADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLND 266
>gi|22202608 blood vessel epicardial substance isoform 4 [Homo
sapiens]
Length = 360
Score = 148 bits (374), Expect = 7e-36
Identities = 82/238 (34%), Positives = 138/238 (57%), Gaps = 6/238 (2%)
Query: 16 SACIRWKQDVEGAVYHLANCLLLLGFMGGSGVY-GCFYLFGFLSAGYLCCVLWGWFSACG 74
+ C W++ + V+H+AN +G + + ++ +L G L+ G ++W C
Sbjct: 32 TTCENWRE-IHHLVFHVANICFAVGLVIPTTLHLHMIFLRGMLTLGCTLYIVWATLYRCA 90
Query: 75 LDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQVPLQTYKEIV-HCC 133
LDI++W+ + V +L L++L+Y+ R + +E +Y+ L PL+VP ++ + C
Sbjct: 91 LDIMIWNSVFLGVNILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLTGQFC 150
Query: 134 EEQVLTLATEQTYAVEGETPIN-RLSLLLSGRVRVSQDGQFLHYIFPYQFMDSPEWESLQ 192
+ TL QTYA E +T ++ RLS+LL G+++VS G FLH I+P F+DSPE+ S Q
Sbjct: 151 --MIQTLKKGQTYAAEDKTSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRSTQ 208
Query: 193 PSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYDISEKLYTLND 250
+ FQVT+ A+ +C ++ W R+ L L E ++ +F L+G DI+ KLY+LND
Sbjct: 209 MHKGEKFQVTIIADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLND 266
>gi|45359846 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform b [Homo sapiens]
Length = 449
Score = 37.0 bits (84), Expect = 0.028
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 283 EKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP 331
EK EE+ E + +PP A P SL Q PP A + P R R RP
Sbjct: 215 EKNLEELEEKSTTPPPAEPVSLPQEPPKPRVEAKPEVQSQPPRVREQRP 263
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.6 bits (83), Expect = 0.036
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 271 LGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTP---PATTNFPAPPTRAR 327
L P A A P + +G + ++PP TP SL++ P S P PAT + PT
Sbjct: 1410 LSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPA 1469
Query: 328 LSRP 331
++ P
Sbjct: 1470 VTPP 1473
Score = 35.4 bits (80), Expect = 0.081
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 269 HVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPP 323
H P A P S KG PA SPP+ PT PP +TPP+ P P
Sbjct: 1283 HKGAPNPAVVTPPSPKGG-----PATSPPKGAPT-----PPAATPPSPKGSPGTP 1327
Score = 34.7 bits (78), Expect = 0.14
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPD 332
PT A P S KG PA PP+ P TPP +TPP+ A P P+
Sbjct: 1241 PTTPAATPPSPKGG-----PATPPPKGAP-----TPPAATPPSLKGGLATPPHK--GAPN 1288
Query: 333 SGILASRIPLQSYSQVISRGQAPLAPTHTP 362
++ P + +G AP P TP
Sbjct: 1289 PAVVTPPSPKGGPATSPPKG-APTPPAATP 1317
Score = 32.3 bits (72), Expect = 0.68
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPD 332
PT A P S KG PA P+ PT PP +TPP+ PA P+ P
Sbjct: 940 PTPPAATPPSPKGG-----PATPSPKWAPT-----PPAATPPSPKGGPATPSPKGAPTPP 989
Query: 333 SGILASRIPLQSYSQVISRGQAPLAPTHTP 362
+ S P + +G AP P TP
Sbjct: 990 AATPPS--PKGGPATPSPKG-APTPPAVTP 1016
Score = 32.0 bits (71), Expect = 0.89
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 273 PTAADAGPESEKGDEEVCEP--AVSPPQATPTSLQ------------QTPPCSTPPATTN 318
PT A P S KG P A +PP TP S + TPP +TPP+
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKG 1045
Query: 319 FPA 321
PA
Sbjct: 1046 SPA 1048
Score = 32.0 bits (71), Expect = 0.89
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSR 330
PT A P S KG P PP+ P TPP TPP+ P P S+
Sbjct: 1310 PTPPAATPPSPKGS-----PGTPPPKGAP-----TPPAVTPPSPKGTPTLPATTPSSK 1357
Score = 31.6 bits (70), Expect = 1.2
Identities = 33/99 (33%), Positives = 38/99 (38%), Gaps = 23/99 (23%)
Query: 269 HVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPP-----CSTPPATTNFPAPP 323
H PT A P S KG A PP+ PT+ TPP +TPP AP
Sbjct: 1122 HKGAPTTPAATPPSPKGG-----LATPPPKGAPTTPAATPPSPKGGLATPPPK---GAPT 1173
Query: 324 TRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTHTP 362
T A G LA+ P +G AP P TP
Sbjct: 1174 TPAATPPSPKGGLATPSP---------KG-APTTPAATP 1202
Score = 31.6 bits (70), Expect = 1.2
Identities = 31/92 (33%), Positives = 35/92 (38%), Gaps = 17/92 (18%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFP--APPTRARLSR 330
PT A P S KG A PP+ PT+ TPP T P AP T A
Sbjct: 1149 PTTPAATPPSPKGGL-----ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1203
Query: 331 PDSGILASRIPLQSYSQVISRGQAPLAPTHTP 362
G LA+ P +G AP P TP
Sbjct: 1204 SPKGGLATPSP---------KG-APTTPAATP 1225
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 273 PTAADAGPESEKGDEEVCEP--AVSPPQATPTSLQ---QTPPCSTPPATTNFPAPPTRAR 327
PT A P S KG P A PP ATP S + TPP P T P +
Sbjct: 1080 PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Query: 328 LSRP 331
L+ P
Sbjct: 1140 LATP 1143
Score = 28.9 bits (63), Expect = 7.6
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 296 PPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISRGQAP 355
PP +P Q P S + FP+P T A S L P S + G AP
Sbjct: 46 PPPCSPAP--QQCPLSAANQASPFPSPSTIA------STPLEVPFPQSSSGTALPLGTAP 97
Query: 356 LAPTHTPEL 364
APT P L
Sbjct: 98 EAPTFLPNL 106
Score = 28.5 bits (62), Expect = 9.9
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQ-----ATPTSL-QQTPPCSTP------PATTNFP 320
P + GP + PA +PP ATP+ TPP TP PA T FP
Sbjct: 970 PPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFP 1029
Query: 321 ---APPTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTHTPEL 364
+ P A P A+ +P + + + +P TP L
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL 1076
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.2 bits (82), Expect = 0.047
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 276 ADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGI 335
A P + + + P +PP P S+ TPP PP+ P L+ P
Sbjct: 344 APPSPSAPPSLQTLPSPPATPPSQAPPSMT-TPPMQAPPSLQTIPPIQVPHSLTSPSLQA 402
Query: 336 LASRIPLQSYSQVISRGQAPLAPTHT 361
S + L S S G L TH+
Sbjct: 403 PPSPLALSSLQATTSLGSPTLQATHS 428
Score = 33.5 bits (75), Expect = 0.31
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 292 PAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISR 351
P +PP TP+S+ TPP PPA A P L P LA+ P +
Sbjct: 575 PLTTPPPETPSSI-ATPPPQAPPAL----ASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 352 GQAPLAPTHTPEL 364
QAP +P +P L
Sbjct: 630 LQAPPSPPASPPL 642
Score = 30.4 bits (67), Expect = 2.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDS 333
SPP ATP L P S PP+ P+PP P S
Sbjct: 334 SPPLATPLPLAPPSP-SAPPSLQTLPSPPATPPSQAPPS 371
Score = 30.0 bits (66), Expect = 3.4
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 20/86 (23%)
Query: 294 VSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRI------------- 340
+SP Q + + P STPP +PP +A LS P S L + +
Sbjct: 432 MSPRQTQASLTSPSRPASTPP-----DSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTI 486
Query: 341 -PLQSYSQVISRG-QAPLAPTHTPEL 364
PLQ+ S + S QAPL+ P L
Sbjct: 487 HPLQALSSLASHSPQAPLSSLIMPPL 512
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDS 333
SPP + P S TPP PP + APP + S P S
Sbjct: 678 SPPASPPVSPSATPPSQAPP---SLAAPPLQVPPSPPAS 713
Score = 29.3 bits (64), Expect = 5.8
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 273 PTAADAGPESEKGDEEVCEPAV---SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLS 329
P + A P S+ P SPP + P S TPP PP APP + S
Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP---LAAPPLQVPPS 740
Query: 330 RPDS 333
P S
Sbjct: 741 PPAS 744
Score = 28.5 bits (62), Expect = 9.9
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 292 PAVSPPQATPTSLQQTPPCST--PPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVI 349
P SPP P SL +PP T PA + +P T L S LAS P S +I
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSS--LASHSPQAPLSSLI 508
Query: 350 S---RGQAPLAP 358
Q+ LAP
Sbjct: 509 MPPLETQSSLAP 520
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 35.8 bits (81), Expect = 0.062
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 288 EVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP 331
+ P PPQA P + Q PP PPA P PPT A +P
Sbjct: 10 QAAPPPSQPPQAPPQAQPQPPP-PPPPAAPQPPQPPTAAATPQP 52
>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
sapiens]
Length = 1074
Score = 35.4 bits (80), Expect = 0.081
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 269 HVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARL 328
H P ++ S +G+E + P P+A P S +P PP + P +A
Sbjct: 174 HPRSPPRSELSLISSRGEEAIPSPT---PRAEPFSANGSPQTELPPTELSVHTPSPQAEP 230
Query: 329 SRPDSGI--LASRI---PLQSYSQVISRGQAPLAPTHT 361
P++ +A R PL+ + + + G P +PTH+
Sbjct: 231 LSPETAQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHS 268
>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
sapiens]
Length = 877
Score = 35.4 bits (80), Expect = 0.081
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 269 HVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARL 328
H P ++ S +G+E + P P+A P S +P PP + P +A
Sbjct: 174 HPRSPPRSELSLISSRGEEAIPSPT---PRAEPFSANGSPQTELPPTELSVHTPSPQAEP 230
Query: 329 SRPDSGI--LASRI---PLQSYSQVISRGQAPLAPTHT 361
P++ +A R PL+ + + + G P +PTH+
Sbjct: 231 LSPETAQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHS 268
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 34.7 bits (78), Expect = 0.14
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 292 PAVSPPQATPTSLQQTPPCSTP-PATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVIS 350
P + P PT+ PP +TP P TT P+PPT + P + + P + +
Sbjct: 1557 PPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPT---TTPSPPTTTTTTPP 1613
Query: 351 RGQAPLAPTHTP 362
P PT TP
Sbjct: 1614 PTTTPSPPTTTP 1625
Score = 33.1 bits (74), Expect = 0.40
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 290 CEPAVSPPQATPTSLQQTPPCST---PPATTNFPAPPTRARLSRPDSGILASRIPLQSYS 346
C SPP TP+ PP ST PP TT P+PPT + P + + I +
Sbjct: 1395 CITTPSPPTTTPSP----PPTSTTTLPPTTT--PSPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 347 QVISRGQAPLAPTHTP 362
+ P++ T TP
Sbjct: 1449 PPTTTPSPPISTTTTP 1464
Score = 32.3 bits (72), Expect = 0.68
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 292 PAVSPPQATPTSLQQTPPCSTP--PATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVI 349
P + P PTS PP +TP P TT PPT P + P + S I
Sbjct: 1401 PPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTT--PSPPITTTTTPPPTTTPSPPI 1458
Query: 350 SRGQAPLAPTHTP 362
S P PT TP
Sbjct: 1459 STTTTP-PPTTTP 1470
Score = 32.3 bits (72), Expect = 0.68
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPD 332
PT + P + PP TP+ T +TPP TT P+PPT ++ P
Sbjct: 1574 PTTTPSPPTTTTPSPPTITTTTPPPTTTPSP--PTTTTTTPPPTTT-PSPPTTTPITPPT 1630
Query: 333 S 333
S
Sbjct: 1631 S 1631
Score = 31.6 bits (70), Expect = 1.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 292 PAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP 331
P +S P + +PP +TP T P+PPT + P
Sbjct: 1456 PPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPP 1495
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 295 SPPQATPTSLQQTPP-----CSTPPATTNFPAPPTRARLSRPDS 333
SPP TP+ TP +TPP TT P+PPT ++ P S
Sbjct: 1471 SPPTTTPSPPTTTPSPPTTTTTTPPPTTT-PSPPTTTPITPPAS 1513
Score = 30.8 bits (68), Expect = 2.0
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQAT----PTSLQQTPP--CSTPPATTNFPAPPTRA 326
PT P ++PP +T PT+ PP +TPP TT P+PPT
Sbjct: 1605 PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT-PSPPTTT 1663
Query: 327 RLSRP 331
S P
Sbjct: 1664 TPSPP 1668
Score = 30.8 bits (68), Expect = 2.0
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Query: 265 PSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPT 324
P+ + PT+ P + PP TP+ T P +PP TT PPT
Sbjct: 1621 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP--SPPITTTTTPPPT 1678
Query: 325 RARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTHT 361
+ P S I + P + S P +P T
Sbjct: 1679 ----TTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Score = 30.4 bits (67), Expect = 2.6
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPC------STPPATTNFPAPPTRA 326
PT P ++PP +T T T P +TPP TT P+PPT
Sbjct: 1487 PTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTT-PSPPTTT 1545
Query: 327 RLSRPDS 333
++ P S
Sbjct: 1546 PITPPTS 1552
Score = 30.4 bits (67), Expect = 2.6
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 265 PSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQAT---PTSLQQTPP---CSTPPATTN 318
P+ + PT+ P + PP T PT+ +PP +TPP TT
Sbjct: 1542 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTT 1601
Query: 319 FPAPPTRARLSRP 331
P+PPT + P
Sbjct: 1602 -PSPPTTTTTTPP 1613
Score = 30.0 bits (66), Expect = 3.4
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 292 PAVSPPQATPTSLQQTPPCSTP---PATTNFPAP---PTRARLSRPDSGILASRIPLQSY 345
P + P PTS PP +TP P TT P P P+ + P I + P +
Sbjct: 1620 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTT 1679
Query: 346 SQVISRGQAPLAPTHT 361
+ P PT T
Sbjct: 1680 TPSSPITTTPSPPTTT 1695
Score = 29.6 bits (65), Expect = 4.4
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 292 PAVSPPQATPTSLQQTPPCSTP---PATTNFPAPPT 324
P + P PTS PP +TP P TT P P T
Sbjct: 1541 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT 1576
Score = 29.3 bits (64), Expect = 5.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPT 324
SPP +T T+ PP +TP T P+PPT
Sbjct: 1455 SPPISTTTT---PPPTTTPSPPTTTPSPPT 1481
Score = 28.9 bits (63), Expect = 7.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTR 325
S P TPT + TP S P +T + P P T+
Sbjct: 4378 STPSPTPTPSKSTPTPSKPSSTPSKPTPGTK 4408
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 34.7 bits (78), Expect = 0.14
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 275 AADAGPESEKGDEEVCEPAVSPPQATP---TSLQQTPPCSTPPATTNFPAPPTRARLSRP 331
A +AG E +G+ E P A P T + PP + P T + AP T L
Sbjct: 112 AEEAGAEGAEGEARPVEKEAEPMDAEPAGDTRAPRPPPAAPAPPTPAYGAPSTNVTL--- 168
Query: 332 DSGILASRIPLQSYSQ 347
+L++++ + +SQ
Sbjct: 169 -EALLSTKVAVAQFSQ 183
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.3 bits (77), Expect = 0.18
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 273 PTAADAGPESEKGDEEVCEPAV---SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLS 329
P + A P S+ P SPP + P S TPP PP APP +
Sbjct: 459 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP---LAAPPLQLAKP 515
Query: 330 RPDSGILASRIPLQSYSQVISR--GQAPLAPT 359
P + + PLQ+ + GQAP +P+
Sbjct: 516 PPQAPPALATPPLQALPSPPASFPGQAPFSPS 547
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDS 333
SPP + P S TPP PP + APP + S P S
Sbjct: 453 SPPASPPVSPSATPPSQAPP---SLAAPPLQVPPSPPAS 488
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 6/101 (5%)
Query: 265 PSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPT 324
PSL + P A + + S + P S TPP PPA PP
Sbjct: 349 PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA---LALPPL 405
Query: 325 RARLSRPDS---GILASRIPLQSYSQVISRGQAPLAPTHTP 362
+A S P S LA+ P + + QAP +P +P
Sbjct: 406 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 446
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.3 bits (77), Expect = 0.18
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 273 PTAADAGPESEKGDEEVCEPAV---SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLS 329
P + A P S+ P SPP + P S TPP PP APP +
Sbjct: 420 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP---LAAPPLQLAKP 476
Query: 330 RPDSGILASRIPLQSYSQVISR--GQAPLAPT 359
P + + PLQ+ + GQAP +P+
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAPFSPS 508
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDS 333
SPP + P S TPP PP + APP + S P S
Sbjct: 414 SPPASPPVSPSATPPSQAPP---SLAAPPLQVPPSPPAS 449
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 6/101 (5%)
Query: 265 PSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPT 324
PSL + P A + + S + P S TPP PPA PP
Sbjct: 310 PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA---LALPPL 366
Query: 325 RARLSRPDS---GILASRIPLQSYSQVISRGQAPLAPTHTP 362
+A S P S LA+ P + + QAP +P +P
Sbjct: 367 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
>gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3
[Homo sapiens]
Length = 462
Score = 34.3 bits (77), Expect = 0.18
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 293 AVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP-------DSGILASRIPLQSY 345
AV PP A P +L P PP T P P T + S P DSG S + +
Sbjct: 269 AVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEF 328
Query: 346 SQVISRGQA 354
++ R +A
Sbjct: 329 EDIMKRNRA 337
>gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform 2
[Homo sapiens]
Length = 471
Score = 34.3 bits (77), Expect = 0.18
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 293 AVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP-------DSGILASRIPLQSY 345
AV PP A P +L P PP T P P T + S P DSG S + +
Sbjct: 278 AVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEF 337
Query: 346 SQVISRGQA 354
++ R +A
Sbjct: 338 EDIMKRNRA 346
>gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform 1
[Homo sapiens]
Length = 514
Score = 34.3 bits (77), Expect = 0.18
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 293 AVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRP-------DSGILASRIPLQSY 345
AV PP A P +L P PP T P P T + S P DSG S + +
Sbjct: 321 AVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEF 380
Query: 346 SQVISRGQA 354
++ R +A
Sbjct: 381 EDIMKRNRA 389
>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
Length = 639
Score = 34.3 bits (77), Expect = 0.18
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 20/103 (19%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQA---TPTSLQQTPPCSTPPATTNFPAP------- 322
P A AGP S + +PP A + TS T P T +TT PAP
Sbjct: 96 PLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATT 155
Query: 323 ---PTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTHTP 362
PT R PD +P S S V+ A AP+ P
Sbjct: 156 VPAPTTPRTPTPD-------LPSSSNSSVLPTPPATEAPSSPP 191
>gi|18426973 DR1-associated protein 1 [Homo sapiens]
Length = 205
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 271 LGPTAADAGPESEK----GDEEVCEPAVSPPQAT-PTSLQQTPPCSTPPATTNFPAPPTR 325
L T ++ ESE G+EE +P PPQA+ P++ Q+PP P + P PP
Sbjct: 133 LSGTDSEQEDESEDTDTDGEEETSQP---PPQASHPSAHFQSPPTPFLPFASTLPLPPAP 189
Query: 326 ARLSRPD 332
S PD
Sbjct: 190 PGPSAPD 196
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 33.9 bits (76), Expect = 0.23
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 281 ESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRI 340
E +G+ EP +PP+ P + + PP +T P+ +PPTR RP +
Sbjct: 301 ERSRGEPRPAEPR-APPRPPPAA--RRPPPATAPSPRRAGSPPTREEEPRPRRSAARPQC 357
Query: 341 PLQSYSQVISRG 352
P+Q ++ G
Sbjct: 358 PVQCECLLMETG 369
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
Query: 278 AGPESEKGDEEVCEPAVSPPQA-----------TPTSLQQTPPCSTPPATTNFPAPPTRA 326
AGP V +PA +PP+ + + Q PP +P T P+PPT+
Sbjct: 622 AGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQH 681
Query: 327 RLSRPDSGILASRIPL-QSYSQVISRGQAPLAPTHTP 362
P S++ + YS +S QAP P P
Sbjct: 682 TGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQP 718
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
Query: 278 AGPESEKGDEEVCEPAVSPPQA-----------TPTSLQQTPPCSTPPATTNFPAPPTRA 326
AGP V +PA +PP+ + + Q PP +P T P+PPT+
Sbjct: 544 AGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQH 603
Query: 327 RLSRPDSGILASRIPL-QSYSQVISRGQAPLAPTHTP 362
P S++ + YS +S QAP P P
Sbjct: 604 TGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQP 640
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 33.5 bits (75), Expect = 0.31
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 264 LPSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPP 323
+PS L P++ P S+K E + P+A P Q +P PPA T+ PAP
Sbjct: 2357 VPSTPLALEPSST---PGSKKSPPEPVDKRAKAPKARPAPPQPSP---APPAFTSCPAPE 2410
Query: 324 TRARLSRPDSGI 335
A L P + +
Sbjct: 2411 PFAELPAPATSL 2422
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 33.1 bits (74), Expect = 0.40
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTP-PCSTPPATTNFPAP-PTRARLSR 330
P+ D +S+ ++ A P PT + TP P S PP T P P PT + +
Sbjct: 162 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGV--TPAPSSAPPGTPQLPTPGPTPSATAV 219
Query: 331 PDSGILASRIPLQSYSQVISRGQAPLAPT-HT 361
P G + SQ ++ QAP AP HT
Sbjct: 220 PPQG-------SPTASQAPNQPQAPTAPVPHT 244
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 33.1 bits (74), Expect = 0.40
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTP-PCSTPPATTNFPAP-PTRARLSR 330
P+ D +S+ ++ A P PT + TP P S PP T P P PT + +
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGV--TPAPSSAPPGTPQLPTPGPTPSATAV 773
Query: 331 PDSGILASRIPLQSYSQVISRGQAPLAPT-HT 361
P G + SQ ++ QAP AP HT
Sbjct: 774 PPQG-------SPTASQAPNQPQAPTAPVPHT 798
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 33.1 bits (74), Expect = 0.40
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 273 PTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTP-PCSTPPATTNFPAP-PTRARLSR 330
P+ D +S+ ++ A P PT + TP P S PP T P P PT + +
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGV--TPAPSSAPPGTPQLPTPGPTPSATAV 773
Query: 331 PDSGILASRIPLQSYSQVISRGQAPLAPT-HT 361
P G + SQ ++ QAP AP HT
Sbjct: 774 PPQG-------SPTASQAPNQPQAPTAPVPHT 798
>gi|22748999 hypothetical protein LOC147685 [Homo sapiens]
Length = 215
Score = 33.1 bits (74), Expect = 0.40
Identities = 12/39 (30%), Positives = 27/39 (69%)
Query: 81 SFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPL 119
+F +A++C + +++++YRL + ++ + LYK L +PL
Sbjct: 108 AFSIALICGMAISYMIYRLAQAEERQQLESLYKNLRIPL 146
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 33.1 bits (74), Expect = 0.40
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 295 SPPQATPTSLQQTPPCSTPPATTNFPAPPTR 325
+PPQ+ P S Q PP PP PAPP R
Sbjct: 392 APPQSVPPSQIQAPPMPGPPPLGPPPAPPLR 422
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 32.7 bits (73), Expect = 0.52
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 276 ADAGPESEKGDEEVCEPAV---SPPQATPTSLQQTPPCSTPPATTNFPAPPTR 325
A GPE++ E P + +PP S PP PP +T PAPPTR
Sbjct: 136 APGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPA--PPESTVRPAPPTR 186
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 32.7 bits (73), Expect = 0.52
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 301 PTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGI--LASRIPLQSYSQVISRGQAPLAP 358
P + QTPP T T PT DS L + P + S ++S Q P+
Sbjct: 463 PETPTQTPPVLTSATGTQTSPAPTTVTFGSTDSSTSTLHTLTPSTALSTIVSTSQVPIPS 522
Query: 359 THTPEL 364
TH+ L
Sbjct: 523 THSSTL 528
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,891,768
Number of Sequences: 37866
Number of extensions: 810872
Number of successful extensions: 5828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 4856
Number of HSP's gapped (non-prelim): 1031
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.