Guide to the Human Genome
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Name: ZNF418 Sequence: fasta or formatted (676aa) NCBI GI: 52138523
Description:

zinc finger protein 418

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9         13           1
 C cysteine            6.8         46           1
 D aspartate           1.5         10           1
 E glutamate          10.8         73           2
 F phenylalanine       4.3         29           2
 G glycine             8.7         59           1
 H histidine           7.8         53           2
 I isoleucine          1.6         11           1
 K lysine              7.0         47           2
 L leucine             5.5         37           3
 M methionine          0.6          4           1
 N asparagine          1.8         12           1
 P proline             3.8         26           1
 Q glutamine           5.5         37           3
 R arginine            8.4         57           2
 S serine             10.8         73           3
 T threonine           4.7         32           1
 V valine              4.3         29           1
 W tryptophan          0.9          6           1
 Y tyrosine            3.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 418 
ZNF814                0.650   zinc finger protein 814 
LOC100293516          0.563   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.562   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.562   PREDICTED: hypothetical protein XP_002343703 
ZNF417                0.515   zinc finger protein 417 
ZNF587                0.497   zinc finger protein 587 
ZNF17                 0.496   zinc finger protein 17 
ZNF132                0.490   zinc finger protein 132 
ZNF551                0.465   zinc finger protein 551 
ZNF256                0.458   zinc finger protein 256 
ZNF304                0.443   zinc finger protein 304 
ZNF420                0.439   zinc finger protein 420 
ZNF749                0.434   zinc finger protein 749 
ZNF530                0.431   zinc finger protein 530 
LOC100287429          0.429   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.429   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.429   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.429   zinc finger protein 84 
ZNF84                 0.429   zinc finger protein 84 
ZNF776                0.429   zinc finger protein 776 
ZNF569                0.428   zinc finger protein 569 
ZNF184                0.424   zinc finger protein 184 
ZNF416                0.424   zinc finger protein 416 
ZNF470                0.421   zinc finger protein 470 
ZNF211                0.421   zinc finger protein 211 isoform 1 
ZNF211                0.420   zinc finger protein 211 isoform 2 
ZNF585B               0.419   zinc finger protein 585B 
ZNF658                0.416   zinc finger protein 658 
ZNF197                0.412   zinc finger protein 197 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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