Guide to the Human Genome
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Name: ICA1L Sequence: fasta or formatted (482aa) NCBI GI: 22095388
Description:

islet cell autoantigen 1,69kDa-like isoform 1

Referenced in:

Pancreas and Insulin

Other entries for this name:
alt prot [82aa] islet cell autoantigen 1,69kDa-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         33           1
 C cysteine            1.7          8           1
 D aspartate           6.4         31           2
 E glutamate           8.5         41           3
 F phenylalanine       5.4         26           1
 G glycine             4.1         20           2
 H histidine           2.3         11           1
 I isoleucine          2.1         10           2
 K lysine              7.3         35           2
 L leucine            10.6         51           2
 M methionine          3.3         16           2
 N asparagine          4.8         23           2
 P proline             3.7         18           1
 Q glutamine           7.1         34           1
 R arginine            3.9         19           2
 S serine             10.6         51           3
 T threonine           5.0         24           2
 V valine              4.4         21           2
 W tryptophan          1.0          5           1
 Y tyrosine            1.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   islet cell autoantigen 1,69kDa-like isoform 1 
ICA1                  0.417   islet cell autoantigen 1 
ICA1                  0.417   islet cell autoantigen 1 
ICA1                  0.417   islet cell autoantigen 1 
ICA1L                 0.143   islet cell autoantigen 1,69kDa-like isoform 2 
ARFIP1                0.032   ADP-ribosylation factor interacting protein 1 isofor...
ARFIP1                0.032   ADP-ribosylation factor interacting protein 1 isofor...
ARFIP1                0.032   ADP-ribosylation factor interacting protein 1 isoform...
ARFIP2                0.020   ADP-ribosylation factor interacting protein 2 
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CLIP1                 0.017   restin isoform b 
CLIP1                 0.017   restin isoform a 
EEA1                  0.016   early endosome antigen 1, 162kD 
FRYL                  0.013   furry-like 
RICS                  0.012   Rho GTPase-activating protein isoform 1 
RICS                  0.012   Rho GTPase-activating protein isoform 2 
CENPE                 0.010   centromere protein E 
ERC2                  0.010   cytomatrix protein p110 
SYNE1                 0.010   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.010   spectrin repeat containing, nuclear envelope 1 isof...
CEP135                0.010   centrosome protein 4 
ZCCHC2                0.010   zinc finger, CCHC domain containing 2 
AFF4                  0.009   ALL1 fused gene from 5q31 
ASH1L                 0.007   absent, small, or homeotic 1-like 
MYH8                  0.007   myosin, heavy chain 8, skeletal muscle, perinatal [...
GCOM1                 0.007   GRINL1A combined protein isoform 2 
GCOM1                 0.007   GRINL1A combined protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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