Guide to the Human Genome
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Name: ICA1L Sequence: fasta or formatted (82aa) NCBI GI: 30102946
Description:

islet cell autoantigen 1,69kDa-like isoform 2

Referenced in:

Pancreas and Insulin

Other entries for this name:
alt prot [482aa] islet cell autoantigen 1,69kDa-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          4           1
 C cysteine            1.2          1           1
 D aspartate           6.1          5           1
 E glutamate           9.8          8           1
 F phenylalanine       3.7          3           1
 G glycine             3.7          3           1
 H histidine           2.4          2           1
 I isoleucine          3.7          3           2
 K lysine             13.4         11           2
 L leucine             8.5          7           2
 M methionine          3.7          3           1
 N asparagine          2.4          2           1
 P proline             2.4          2           1
 Q glutamine           7.3          6           1
 R arginine            4.9          4           2
 S serine              6.1          5           1
 T threonine           4.9          4           1
 V valine              7.3          6           2
 W tryptophan          1.2          1           1
 Y tyrosine            2.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   islet cell autoantigen 1,69kDa-like isoform 2 
ICA1L                 0.944   islet cell autoantigen 1,69kDa-like isoform 1 
ICA1                  0.542   islet cell autoantigen 1 
ICA1                  0.542   islet cell autoantigen 1 
ICA1                  0.542   islet cell autoantigen 1 
FAM186A               0.028   family with sequence similarity 186, member A [Homo...
DNAH8                 0.021   dynein, axonemal, heavy polypeptide 8 
PRUNE2                0.021   prune homolog 2 
MTHFR                 0.021   5,10-methylenetetrahydrofolate reductase 
FLJ32810              0.014   Rho-type GTPase-activating protein FLJ32810 
HS3ST6                0.014   heparan sulfate (glucosamine) 3-O-sulfotransferase ...
CMYA5                 0.014   cardiomyopathy associated 5 
CLIP1                 0.014   restin isoform b 
CLIP1                 0.014   restin isoform a 
CCDC67                0.007   coiled-coil domain containing 67 
GALNT5                0.007   N-acetylgalactosaminyltransferase 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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