Guide to the Human Genome
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Name: OSBPL9 Sequence: fasta or formatted (558aa) NCBI GI: 22547167
Description:

oxysterol binding protein-like 9 isoform a

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [736aa] oxysterol binding protein-like 9 isoform e
alt mRNA [558aa] oxysterol binding protein-like 9 isoform a
alt prot [571aa] oxysterol binding protein-like 9 isoform b
alt prot [626aa] oxysterol binding protein-like 9 isoform c
alt prot [723aa] oxysterol binding protein-like 9 isoform d
alt prot [746aa] oxysterol binding protein-like 9 isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         28           2
 C cysteine            1.8         10           1
 D aspartate           5.6         31           3
 E glutamate           7.5         42           2
 F phenylalanine       4.1         23           2
 G glycine             5.4         30           2
 H histidine           4.1         23           2
 I isoleucine          5.4         30           2
 K lysine              6.8         38           3
 L leucine             7.7         43           2
 M methionine          1.4          8           1
 N asparagine          4.1         23           1
 P proline             6.5         36           2
 Q glutamine           3.0         17           1
 R arginine            3.8         21           2
 S serine             11.1         62           3
 T threonine           5.6         31           2
 V valine              6.6         37           2
 W tryptophan          1.6          9           1
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol binding protein-like 9 isoform a 
OSBPL9                1.000   oxysterol binding protein-like 9 isoform f 
OSBPL9                1.000   oxysterol binding protein-like 9 isoform d 
OSBPL9                1.000   oxysterol binding protein-like 9 isoform c 
OSBPL9                1.000   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.992   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.992   oxysterol binding protein-like 9 isoform b 
OSBPL11               0.368   oxysterol binding protein-like 11 
OSBPL10               0.360   oxysterol-binding protein-like protein 10 
OSBPL8                0.189   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.189   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL5                0.175   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.175   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.175   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL1A               0.095   oxysterol-binding protein-like 1A isoform B 
OSBPL1A               0.088   oxysterol-binding protein-like 1A isoform A 
OSBPL2                0.075   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.075   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBPL6                0.066   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.066   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL3                0.058   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.058   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.058   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.058   oxysterol-binding protein-like protein 3 isoform a [...
OSBPL7                0.054   oxysterol-binding protein-like protein 7 
OSBP                  0.035   oxysterol binding protein 
OSBP2                 0.029   oxysterol binding protein 2 isoform a 
DSPP                  0.018   dentin sialophosphoprotein preproprotein 
LOC100131251          0.017   PREDICTED: hypothetical protein 
LOC100131251          0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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