BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sapiens] (112 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sa... 231 7e-62 gi|115299754 SCF apoptosis response protein 1 isoform b [Homo sa... 231 7e-62 gi|115299760 SCF apoptosis response protein 1 isoform b [Homo sa... 231 7e-62 gi|115299762 SCF apoptosis response protein 1 isoform a [Homo sa... 195 7e-51 gi|115299750 SCF apoptosis response protein 1 isoform a [Homo sa... 195 7e-51 gi|115299745 SCF apoptosis response protein 1 isoform a [Homo sa... 195 7e-51 gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens] 79 8e-16 gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens] 79 8e-16 gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens] 79 8e-16 gi|110815838 dysbindin (dystrobrevin binding protein 1) domain c... 42 1e-04 gi|110815842 dysbindin (dystrobrevin binding protein 1) domain c... 42 1e-04 gi|16753221 cadherin 22 precursor [Homo sapiens] 32 0.083 gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 30 0.32 gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 30 0.32 gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... 29 0.71 gi|45827729 scribble isoform b [Homo sapiens] 29 0.71 gi|45827731 scribble isoform a [Homo sapiens] 29 0.71 gi|238776840 patatin-like phospholipase domain containing 1 isof... 29 0.92 gi|224589138 patatin-like phospholipase domain containing 1 isof... 29 0.92 gi|224593249 patatin-like phospholipase domain containing 1 isof... 29 0.92 gi|12597625 activating transcription factor 5 [Homo sapiens] 28 1.2 gi|153251840 zinc finger protein 839 [Homo sapiens] 28 1.6 gi|6633798 BarH-like homeobox 2 [Homo sapiens] 28 2.1 gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|22779877 connexin 46 [Homo sapiens] 27 2.7 gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 27 3.5 gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 27 3.5 >gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sapiens] Length = 112 Score = 231 bits (590), Expect = 7e-62 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 >gi|115299754 SCF apoptosis response protein 1 isoform b [Homo sapiens] Length = 112 Score = 231 bits (590), Expect = 7e-62 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 >gi|115299760 SCF apoptosis response protein 1 isoform b [Homo sapiens] Length = 112 Score = 231 bits (590), Expect = 7e-62 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDVRL 112 >gi|115299762 SCF apoptosis response protein 1 isoform a [Homo sapiens] Length = 161 Score = 195 bits (495), Expect = 7e-51 Identities = 97/109 (88%), Positives = 98/109 (89%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109 >gi|115299750 SCF apoptosis response protein 1 isoform a [Homo sapiens] Length = 161 Score = 195 bits (495), Expect = 7e-51 Identities = 97/109 (88%), Positives = 98/109 (89%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109 >gi|115299745 SCF apoptosis response protein 1 isoform a [Homo sapiens] Length = 161 Score = 195 bits (495), Expect = 7e-51 Identities = 97/109 (88%), Positives = 98/109 (89%) Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60 Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109 >gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens] Length = 270 Score = 79.0 bits (193), Expect = 8e-16 Identities = 37/69 (53%), Positives = 51/69 (73%) Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71 QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+ Sbjct: 107 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 166 Query: 72 DPDAADVFL 80 D +A DVFL Sbjct: 167 DQEALDVFL 175 >gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens] Length = 303 Score = 79.0 bits (193), Expect = 8e-16 Identities = 37/69 (53%), Positives = 51/69 (73%) Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71 QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+ Sbjct: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247 Query: 72 DPDAADVFL 80 D +A DVFL Sbjct: 248 DQEALDVFL 256 >gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens] Length = 351 Score = 79.0 bits (193), Expect = 8e-16 Identities = 37/69 (53%), Positives = 51/69 (73%) Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71 QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+ Sbjct: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247 Query: 72 DPDAADVFL 80 D +A DVFL Sbjct: 248 DQEALDVFL 256 >gi|110815838 dysbindin (dystrobrevin binding protein 1) domain containing 1 isoform 1 [Homo sapiens] Length = 158 Score = 41.6 bits (96), Expect = 1e-04 Identities = 18/45 (40%), Positives = 29/45 (64%) Query: 40 LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84 L + +R P+ S+SS+EV+ D L+ EL D+ D + A+VF +D Sbjct: 53 LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 97 >gi|110815842 dysbindin (dystrobrevin binding protein 1) domain containing 1 isoform 2 [Homo sapiens] Length = 178 Score = 41.6 bits (96), Expect = 1e-04 Identities = 18/45 (40%), Positives = 29/45 (64%) Query: 40 LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84 L + +R P+ S+SS+EV+ D L+ EL D+ D + A+VF +D Sbjct: 73 LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117 >gi|16753221 cadherin 22 precursor [Homo sapiens] Length = 828 Score = 32.3 bits (72), Expect = 0.083 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Query: 9 LERQQ-----LRLRERQKFFEDILQPETEFVFPLSHLHLESQR----PPIGSISSMEVNV 59 L+R+Q LR + R + +L+PE+EF+ + ++ R P IGS++ + Sbjct: 125 LDREQKTFYTLRAQARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGSVAELSPTG 184 Query: 60 DTLEQVELIDLGDP 73 ++ QV D DP Sbjct: 185 TSVMQVMASDADDP 198 >gi|14719400 ADP-ribosylation factor binding protein 3 isoform short [Homo sapiens] Length = 690 Score = 30.4 bits (67), Expect = 0.32 Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 51 SISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQP 106 ++ E N Q LIDL + D + P PTP SSG+P+ AS P Sbjct: 277 TLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGP 332 >gi|20336267 ADP-ribosylation factor binding protein 3 isoform long [Homo sapiens] Length = 723 Score = 30.4 bits (67), Expect = 0.32 Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 51 SISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQP 106 ++ E N Q LIDL + D + P PTP SSG+P+ AS P Sbjct: 310 TLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGP 365 >gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1 [Homo sapiens] Length = 390 Score = 29.3 bits (64), Expect = 0.71 Identities = 14/38 (36%), Positives = 18/38 (47%) Query: 73 PDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPDV 110 PD LP PP TP +SG + G S + P+V Sbjct: 81 PDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEV 118 >gi|45827729 scribble isoform b [Homo sapiens] Length = 1630 Score = 29.3 bits (64), Expect = 0.71 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 3 PNPRAALERQQLRLRERQKFFE-DILQPETE 32 P P A +QL RERQK+FE ++ P+ E Sbjct: 1341 PTPGPAASPEQLSFRERQKYFELEVRVPQAE 1371 >gi|45827731 scribble isoform a [Homo sapiens] Length = 1655 Score = 29.3 bits (64), Expect = 0.71 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 3 PNPRAALERQQLRLRERQKFFE-DILQPETE 32 P P A +QL RERQK+FE ++ P+ E Sbjct: 1341 PTPGPAASPEQLSFRERQKYFELEVRVPQAE 1371 >gi|238776840 patatin-like phospholipase domain containing 1 isoform 3 [Homo sapiens] Length = 532 Score = 28.9 bits (63), Expect = 0.92 Identities = 31/87 (35%), Positives = 35/87 (40%), Gaps = 13/87 (14%) Query: 10 ERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELID 69 ER Q LR RQ E QP E+V P S PP+ V TLE Sbjct: 291 ERSQPSLRARQASLEGATQPHKEWV-PKGDGR-GSHGPPVSQ------PVQTLE----FT 338 Query: 70 LGDPDAADVFLPCEDPPPTPQSSGMPL 96 P +A V P E PP P +S PL Sbjct: 339 CESPVSAPVS-PLEQPPAQPLASSTPL 364 >gi|224589138 patatin-like phospholipase domain containing 1 isoform 2 [Homo sapiens] Length = 446 Score = 28.9 bits (63), Expect = 0.92 Identities = 31/87 (35%), Positives = 35/87 (40%), Gaps = 13/87 (14%) Query: 10 ERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELID 69 ER Q LR RQ E QP E+V P S PP+ V TLE Sbjct: 205 ERSQPSLRARQASLEGATQPHKEWV-PKGDGR-GSHGPPVSQ------PVQTLE----FT 252 Query: 70 LGDPDAADVFLPCEDPPPTPQSSGMPL 96 P +A V P E PP P +S PL Sbjct: 253 CESPVSAPVS-PLEQPPAQPLASSTPL 278 >gi|224593249 patatin-like phospholipase domain containing 1 isoform 1 [Homo sapiens] Length = 437 Score = 28.9 bits (63), Expect = 0.92 Identities = 31/87 (35%), Positives = 35/87 (40%), Gaps = 13/87 (14%) Query: 10 ERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELID 69 ER Q LR RQ E QP E+V P S PP+ V TLE Sbjct: 196 ERSQPSLRARQASLEGATQPHKEWV-PKGDGR-GSHGPPVSQ------PVQTLE----FT 243 Query: 70 LGDPDAADVFLPCEDPPPTPQSSGMPL 96 P +A V P E PP P +S PL Sbjct: 244 CESPVSAPVS-PLEQPPAQPLASSTPL 269 >gi|12597625 activating transcription factor 5 [Homo sapiens] Length = 282 Score = 28.5 bits (62), Expect = 1.2 Identities = 16/45 (35%), Positives = 19/45 (42%) Query: 62 LEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQP 106 LEQ+E L P P PPP P + +PL F QP Sbjct: 109 LEQMEDFFLDAPPLPPPSPPPLPPPPLPPAPSLPLSLPSFDLPQP 153 >gi|153251840 zinc finger protein 839 [Homo sapiens] Length = 927 Score = 28.1 bits (61), Expect = 1.6 Identities = 17/52 (32%), Positives = 23/52 (44%) Query: 41 HLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSS 92 HL Q+P S+ EV LE++ +D D A +P P P P S Sbjct: 779 HLNHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGS 830 >gi|6633798 BarH-like homeobox 2 [Homo sapiens] Length = 279 Score = 27.7 bits (60), Expect = 2.1 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 7/45 (15%) Query: 64 QVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEP 108 Q EL + +P A DV L +PP PQ +P +S+P P Sbjct: 240 QEELCEAQEPKARDVPLEMAEPPDPPQELPIP-------SSEPPP 277 >gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] Length = 292 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 81 PCEDPPPTPQSSGMPLCFGDFSASQPEP 108 P PPP S PLC G + PEP Sbjct: 42 PDHAPPPGRPSCSRPLCAGSSCLATPEP 69 >gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] Length = 245 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 81 PCEDPPPTPQSSGMPLCFGDFSASQPEP 108 P PPP S PLC G + PEP Sbjct: 62 PDHAPPPGRPSCSRPLCAGSSCLATPEP 89 >gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] Length = 218 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 81 PCEDPPPTPQSSGMPLCFGDFSASQPEP 108 P PPP S PLC G + PEP Sbjct: 35 PDHAPPPGRPSCSRPLCAGSSCLATPEP 62 >gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] Length = 245 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 81 PCEDPPPTPQSSGMPLCFGDFSASQPEP 108 P PPP S PLC G + PEP Sbjct: 62 PDHAPPPGRPSCSRPLCAGSSCLATPEP 89 >gi|22779877 connexin 46 [Homo sapiens] Length = 435 Score = 27.3 bits (59), Expect = 2.7 Identities = 12/23 (52%), Positives = 14/23 (60%) Query: 73 PDAADVFLPCEDPPPTPQSSGMP 95 PDA++ L DPPP P SS P Sbjct: 240 PDASEAPLGTADPPPLPPSSRPP 262 >gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sapiens] Length = 603 Score = 26.9 bits (58), Expect = 3.5 Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 9 LERQQLRLRERQKFFEDILQPETE 32 L+ QQ RLRER+K + + +P+++ Sbjct: 342 LQEQQERLREREKRLQQLAEPQSD 365 >gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapiens] Length = 603 Score = 26.9 bits (58), Expect = 3.5 Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 9 LERQQLRLRERQKFFEDILQPETE 32 L+ QQ RLRER+K + + +P+++ Sbjct: 342 LQEQQERLREREKRLQQLAEPQSD 365 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.138 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,720,749 Number of Sequences: 37866 Number of extensions: 273471 Number of successful extensions: 1100 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1062 Number of HSP's gapped (non-prelim): 57 length of query: 112 length of database: 18,247,518 effective HSP length: 82 effective length of query: 30 effective length of database: 15,142,506 effective search space: 454275180 effective search space used: 454275180 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.