Search of human proteins with 115270970

Search of human proteins with 115270970

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115270970 Mid-1-related chloride channel 1 isoform 1 [Homo
sapiens]
         (551 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115270970 Mid-1-related chloride channel 1 isoform 1 [Homo sa...  1142   0.0  
gi|13194195 Mid-1-related chloride channel 1 isoform 2 [Homo sap...  1016   0.0  
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform...    37   0.047
gi|167614488 TBC1 domain family, member 10B [Homo sapiens]             37   0.061
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        36   0.080
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ...    36   0.080
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     36   0.10 
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]           35   0.14 
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]           35   0.14 
gi|213385278 TNF receptor-associated factor 3 interacting protei...    35   0.23 
gi|22538470 eomesodermin [Homo sapiens]                                34   0.30 
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]           34   0.30 
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]           34   0.30 
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       34   0.30 
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       34   0.30 
gi|33239445 eukaryotic translation initiation factor 3, subunit ...    34   0.30 
gi|83367072 eukaryotic translation initiation factor 3, subunit ...    34   0.30 
gi|83367077 mucin 16 [Homo sapiens]                                    33   0.52 
gi|30795231 brain abundant, membrane attached signal protein 1 [...    33   0.52 
gi|54873624 eukaryotic translation initiation factor 2A [Homo sa...    33   0.52 
gi|28416921 purinergic receptor P2X2 isoform H [Homo sapiens]          33   0.52 
gi|27881423 purinergic receptor P2X2 isoform I [Homo sapiens]          33   0.52 
gi|25092733 purinergic receptor P2X2 isoform D [Homo sapiens]          33   0.52 
gi|25092719 purinergic receptor P2X2 isoform A [Homo sapiens]          33   0.52 
gi|7706629 purinergic receptor P2X2 isoform C [Homo sapiens]           33   0.52 
gi|91982772 mucin 17 [Homo sapiens]                                    33   0.52 
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol...    33   0.68 
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol...    33   0.68 
gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]    33   0.68 
gi|134142824 forkhead box D2 [Homo sapiens]                            33   0.68 

>gi|115270970 Mid-1-related chloride channel 1 isoform 1 [Homo
           sapiens]
          Length = 551

 Score = 1142 bits (2953), Expect = 0.0
 Identities = 551/551 (100%), Positives = 551/551 (100%)

Query: 1   MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC 60
           MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
Sbjct: 1   MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC 60

Query: 61  ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD 120
           ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
Sbjct: 61  ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD 120

Query: 121 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV 180
           MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
Sbjct: 121 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV 180

Query: 181 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH 240
           DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
Sbjct: 181 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH 240

Query: 241 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL 300
           QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
Sbjct: 241 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL 300

Query: 301 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL 360
           AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
Sbjct: 301 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL 360

Query: 361 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR 420
           RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
Sbjct: 361 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR 420

Query: 421 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE 480
           EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
Sbjct: 421 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE 480

Query: 481 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP 540
           GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
Sbjct: 481 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP 540

Query: 541 RGQDPVSSPCG 551
           RGQDPVSSPCG
Sbjct: 541 RGQDPVSSPCG 551


>gi|13194195 Mid-1-related chloride channel 1 isoform 2 [Homo
           sapiens]
          Length = 501

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 501/551 (90%), Positives = 501/551 (90%), Gaps = 50/551 (9%)

Query: 1   MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC 60
           MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
Sbjct: 1   MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC 60

Query: 61  ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD 120
           ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL       
Sbjct: 61  ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL------- 113

Query: 121 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV 180
                                                      FHDFETWKWRFEDSFGV
Sbjct: 114 -------------------------------------------FHDFETWKWRFEDSFGV 130

Query: 181 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH 240
           DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
Sbjct: 131 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH 190

Query: 241 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL 300
           QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
Sbjct: 191 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL 250

Query: 301 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL 360
           AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
Sbjct: 251 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL 310

Query: 361 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR 420
           RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
Sbjct: 311 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR 370

Query: 421 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE 480
           EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
Sbjct: 371 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE 430

Query: 481 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP 540
           GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
Sbjct: 431 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP 490

Query: 541 RGQDPVSSPCG 551
           RGQDPVSSPCG
Sbjct: 491 RGQDPVSSPCG 501


>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
           [Homo sapiens]
          Length = 1045

 Score = 37.0 bits (84), Expect = 0.047
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 379 RRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRREILRE--RDVDLRFQTGN 436
           R +++ +DY  +GG     F  +     + +   ++  E   E+L +  +   L F  G 
Sbjct: 342 RTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQSTSLTFGEGA 401

Query: 437 KSP--EVLRAFDVPDAEARE---HPTVVPSHKSPVLDTKPKETGGILGEGTPKESST--E 489
           +SP  +  R    P   A E   HP+  P  +SP  +   K+  G     T +E     +
Sbjct: 402 ESPGGQSCRRGKEPKVSAGEPGSHPSPAP-RRSPAGN---KQADGAASAPTEEEEEVVKD 457

Query: 490 SSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSP 525
            +Q +KP   Q ++G+  GSP   +  + S+   +P
Sbjct: 458 RTQQSKPQPPQPSTGSLTGSPHLSELSVNSQGGVAP 493


>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
          Length = 808

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 479 GEGTPKESSTESSQSAKPVSGQDT--SGNTEGSPAAEKAQLKSEAA-GSPDQGSTYSPAR 535
           G G    +S  + Q+ +  SG  T  SG  E   A        E A  S D GST S   
Sbjct: 195 GHGAAAATSASAGQAPEDPSGPGTGPSGTCEAPVAVVTVTPAPEPAENSQDLGSTSSLGP 254

Query: 536 GVAGPRGQDP 545
           G++GPRGQ P
Sbjct: 255 GISGPRGQAP 264


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 36.2 bits (82), Expect = 0.080
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 448  PDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTE 507
            P+   +  P+  P+ K  V + +P E        TP +    SS S+   S   +S ++ 
Sbjct: 2572 PEVALKRVPSPTPAPKEAVREGRPPEP-------TPAKRKRRSSSSSSSSSSSSSSSSSS 2624

Query: 508  GSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVSSP 549
             S ++  +   S ++ S    S+ SP+    GP+     +SP
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSS-SPSPAKPGPQALPKPASP 2665



 Score = 33.1 bits (74), Expect = 0.68
 Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 449 DAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEG 508
           +++ R+H +  P  K    D K K +        PK      S SA   S  DTS +   
Sbjct: 223 ESKKRKHRSPTPKSKRKSKDKKRKRSRSTTP--APKSRRAHRSTSADSASSSDTSRSRSR 280

Query: 509 SPAAEKAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVSSP 549
           S AA K    + A  SP      SPA G  G  G  P S P
Sbjct: 281 S-AAAKTHTTALAGRSP------SPASGRRG-EGDAPFSEP 313



 Score = 29.6 bits (65), Expect = 7.5
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 454 EHPTVVPSHKSPVLDTKPKETGGILGEGTPKESS-------------TESSQSAKPVSGQ 500
           + P   PS  SP  D  P ++   L + +  ESS             + S +S KP    
Sbjct: 388 QEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAP 447

Query: 501 DTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVSSPCG 551
            +      SP ++    +S      D+  +++P+R +   R + P ++  G
Sbjct: 448 GSHREISSSPTSKN---RSHGRAKRDKSHSHTPSRRMG--RSRSPATAKRG 493


>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
           [Homo sapiens]
          Length = 1008

 Score = 36.2 bits (82), Expect = 0.080
 Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 15/124 (12%)

Query: 439 PEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVS 498
           PE+L           +  TV P  + PV   +         + + ++ + ESS    PVS
Sbjct: 432 PELLSPGQAERVSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVS 491

Query: 499 ---GQDTSGNTEGSPAAEKAQ---------LKSEAAGSPDQGSTYSPARGVAGPRG---Q 543
              G   S  T G P+A KA+         L SE AG    G     A G A P     +
Sbjct: 492 SGPGDPRSLGTAGPPSAVKAEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKE 551

Query: 544 DPVS 547
           DPVS
Sbjct: 552 DPVS 555


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 52/214 (24%), Positives = 81/214 (37%), Gaps = 35/214 (16%)

Query: 364 GGPESEPPQALRPRDRRRQEEIDYRPDGGAGDAD-----FHYRGQMGPTEQGPYAKTY-- 416
           GGP   PP +L  R+ R +  +D   D      +      H RG  G      Y + Y  
Sbjct: 112 GGPAYGPPPSLHAREGRYERRLDGASDNRERAYEHSAYGHHERGTGGFDRTRHYDQDYYR 171

Query: 417 EGRREILRERDVDLRFQTGNKSPEVLRAFDVP-DAEAREH---PTVVPSHKSPVLDTKPK 472
           + R   L+     L + + ++SP    A D   +  ARE    P+VV  H+    D   +
Sbjct: 172 DPRERTLQH---GLYYASRSRSPNRFDAHDPRYEPRAREQFTLPSVV--HRDIYRDDITR 226

Query: 473 ETGGILGEGTPKESSTES---------------SQSAKPVSGQDTSGNTEGSPAAE---- 513
           E  G   E   + S + S               SQ+++P      SG+   S +++    
Sbjct: 227 EVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISS 286

Query: 514 KAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVS 547
            +   S+++ S    S  SPAR V       P S
Sbjct: 287 SSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTS 320


>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
          Length = 1938

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 480 EGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAG 539
           +G    SS +  +  + +SGQ TS +T       K     +A  SP QG+   P R  A 
Sbjct: 520 DGGCSSSSEDQGERVRQLSGQSTSSDT-----TYKGGASEKAGSSPAQGAQNEPPRLNAS 574

Query: 540 PRGQDPVSSP 549
           P  ++  +SP
Sbjct: 575 PAAREEATSP 584


>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
          Length = 1960

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 480 EGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAG 539
           +G    SS +  +  + +SGQ TS +T       K     +A  SP QG+   P R  A 
Sbjct: 520 DGGCSSSSEDQGERVRQLSGQSTSSDT-----TYKGGASEKAGSSPAQGAQNEPPRLNAS 574

Query: 540 PRGQDPVSSP 549
           P  ++  +SP
Sbjct: 575 PAAREEATSP 584


>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
           isoform 2 [Homo sapiens]
          Length = 625

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 43/178 (24%)

Query: 375 RPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRREILRERDVDL---R 431
           R RD  R++E + + +GG                     K  E  R+  RERD D    R
Sbjct: 239 RDRDSERKKETERKSEGG---------------------KEKERLRDRDRERDRDKGKDR 277

Query: 432 FQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESS 491
            +   K+ E   ++D+   + REH    P  KS       K+    L +GT K+S  E+ 
Sbjct: 278 DRRRVKNGE--HSWDLDREKNREHDK--PEKKSASSGEMSKK----LSDGTFKDSKAET- 328

Query: 492 QSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVSSP 549
                    +T  +T  S +      K  +  S +  ST S A G AGP GQD    P
Sbjct: 329 ---------ETEISTRASKSLTTKTSKRRSKNSVEGDST-SDAEGDAGPAGQDKSEVP 376


>gi|22538470 eomesodermin [Homo sapiens]
          Length = 686

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 474 TGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSP 533
           + G L    P     +  +++K  SG  +     G PAA  A   +      D G  ++ 
Sbjct: 32  SAGHLPSAAPSPQKLDLDKASKKFSGSLSCEAVSGEPAAASAGAPAAMLSDTDAGDAFAS 91

Query: 534 ARGVAGPRGQD-PVSSPCG 551
           A  VA P   D    SPCG
Sbjct: 92  AAAVAKPGPPDGRKGSPCG 110


>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 476 GILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAA-GSPDQGSTYSPA 534
           G+     P ES   ++  A P  G  +        AAE A    EAA G+P  G   S  
Sbjct: 290 GVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAP 349

Query: 535 RGVAGPRGQDPVSSPCG 551
            G  G     P+  P G
Sbjct: 350 AGPEGLGQARPIEVPWG 366


>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 476 GILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAA-GSPDQGSTYSPA 534
           G+     P ES   ++  A P  G  +        AAE A    EAA G+P  G   S  
Sbjct: 290 GVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAP 349

Query: 535 RGVAGPRGQDPVSSPCG 551
            G  G     P+  P G
Sbjct: 350 AGPEGLGQARPIEVPWG 366


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 48/205 (23%), Positives = 66/205 (32%), Gaps = 31/205 (15%)

Query: 362 HIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYE--GR 419
           ++ GP + PP    PR +RR   +  RP    GDA+    G +G T  G YA      GR
Sbjct: 698 YLAGPPATPPDP--PRPKRRSHSLS-RPGPTEGDAEGEAEGPVGST-LGSYATLTRRPGR 753

Query: 420 REILR-------------ERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPV 466
             ++R              R      +   K P        P    R      PS + P 
Sbjct: 754 SALVRTSPSVTPTPARGTPRSQSFALRARRKGPP-------PPPPKRLSSVSGPSPEPPP 806

Query: 467 LDTKPKETGGILG--EGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGS 524
           LD  P    G  G    T  E +  S     P      S   E  P  E       + GS
Sbjct: 807 LDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGT---PPSRGS 863

Query: 525 PDQGSTYSPARGVAGPRGQDPVSSP 549
             +G  ++    +   +   P   P
Sbjct: 864 SGEGLPFAEEGNLTIKQRPKPAGPP 888


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 48/205 (23%), Positives = 66/205 (32%), Gaps = 31/205 (15%)

Query: 362 HIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYE--GR 419
           ++ GP + PP    PR +RR   +  RP    GDA+    G +G T  G YA      GR
Sbjct: 780 YLAGPPATPPDP--PRPKRRSHSLS-RPGPTEGDAEGEAEGPVGST-LGSYATLTRRPGR 835

Query: 420 REILR-------------ERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPV 466
             ++R              R      +   K P        P    R      PS + P 
Sbjct: 836 SALVRTSPSVTPTPARGTPRSQSFALRARRKGPP-------PPPPKRLSSVSGPSPEPPP 888

Query: 467 LDTKPKETGGILG--EGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGS 524
           LD  P    G  G    T  E +  S     P      S   E  P  E       + GS
Sbjct: 889 LDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGT---PPSRGS 945

Query: 525 PDQGSTYSPARGVAGPRGQDPVSSP 549
             +G  ++    +   +   P   P
Sbjct: 946 SGEGLPFAEEGNLTIKQRPKPAGPP 970


>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
           eta, 116kDa [Homo sapiens]
          Length = 814

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 460 PSHKSPVLDTKPKETGGIL---GEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQ 516
           P  + P  +  P E  G+L   G G P+ + TE+S     ++           PAAE   
Sbjct: 19  PGQQQPAAEPPPAE--GLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAE--- 73

Query: 517 LKSEAAGSPDQGSTYSPARGVAGPRGQDPV 546
             +EAA  P +  +   A  + G   + PV
Sbjct: 74  --AEAASGPSESPSPPAAEELPGSHAEPPV 101


>gi|83367072 eukaryotic translation initiation factor 3, subunit 9
           eta, 116kDa [Homo sapiens]
          Length = 814

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 460 PSHKSPVLDTKPKETGGIL---GEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQ 516
           P  + P  +  P E  G+L   G G P+ + TE+S     ++           PAAE   
Sbjct: 19  PGQQQPAAEPPPAE--GLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRTEPAAE--- 73

Query: 517 LKSEAAGSPDQGSTYSPARGVAGPRGQDPV 546
             +EAA  P +  +   A  + G   + PV
Sbjct: 74  --AEAASGPSESPSPPAAEELPGSHAEPPV 101


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 407   TEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPV 466
             T  G  + T EGR  ++    +D   Q G  S   +   D    E+ E  TV  +++ P 
Sbjct: 10363 TSLGTESSTTEGR--LVMVSTLDTSSQPGRTSSSPI--LDTRMTESVELGTVTSAYQVPS 10418

Query: 467   LDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEK 514
             L T+   T GI+   T   +      + +PV G  TS     SPA+ K
Sbjct: 10419 LSTRLTRTDGIMEHITKIPNEAAHRGTIRPVKGPQTS----TSPASPK 10462


>gi|30795231 brain abundant, membrane attached signal protein 1
           [Homo sapiens]
          Length = 227

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 23/186 (12%)

Query: 367 ESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTY--EGRREILR 424
           ESEP  A  P + +  +E   +   G  +     +      E+ P A+    EG  E   
Sbjct: 39  ESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKA 98

Query: 425 ERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPK 484
           E           K+PE  +A   P A   E P    +  +P     P       GE   K
Sbjct: 99  EPP---------KAPEQEQAAPGP-AAGGEAPKAAEAAAAPAESAAPAA-----GEEPSK 143

Query: 485 ESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQ--GSTYSPARGVAGPRG 542
           E   E  ++  P +       ++G+PA++     SEAA S  +   +T +P+   + P+ 
Sbjct: 144 EEG-EPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPS---STPKA 199

Query: 543 QDPVSS 548
           Q P +S
Sbjct: 200 QGPAAS 205



 Score = 29.3 bits (64), Expect = 9.8
 Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 435 GNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTES---- 490
           G K  +  + ++V D +A+E               K  E      EGTPKES  ++    
Sbjct: 2   GGKLSKKKKGYNVNDEKAKEKD-------------KKAEGAATEEEGTPKESEPQAAAEP 48

Query: 491 --SQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP 540
             ++  K    QD  G  E     + A    E A   +   T   A   A P
Sbjct: 49  AEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEP 100


>gi|54873624 eukaryotic translation initiation factor 2A [Homo
           sapiens]
          Length = 585

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 447 VPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNT 506
           VP     E P V  +++ P L  KP  T   L E  P ++    S + KP+S +    N 
Sbjct: 431 VPSEVPNEEPKVATAYRPPALRNKP-ITNSKLHEEEPPQNMKPQSGNDKPLS-KTALKNQ 488

Query: 507 EGSPAAEKAQLKSEAAGSPDQGSTYSP 533
               A + A+ ++ +  SPD   T +P
Sbjct: 489 RKHEAKKAAKQEARSDKSPDLAPTPAP 515


>gi|28416921 purinergic receptor P2X2 isoform H [Homo sapiens]
          Length = 379

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 460 PSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPA-------- 511
           PSH S    + P     +LG+  P+       Q   P SGQ+     E  PA        
Sbjct: 292 PSHPS---GSWPVTLARVLGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCP 348

Query: 512 --AEKAQLKSEAAGSPDQGSTYSPARGVA 538
             A   Q+    A  P Q ST +  +G+A
Sbjct: 349 ISAPSEQMVDTPASEPAQASTPTDPKGLA 377


>gi|27881423 purinergic receptor P2X2 isoform I [Homo sapiens]
          Length = 399

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 460 PSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPA-------- 511
           PSH S    + P     +LG+  P+       Q   P SGQ+     E  PA        
Sbjct: 312 PSHPS---GSWPVTLARVLGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCP 368

Query: 512 --AEKAQLKSEAAGSPDQGSTYSPARGVA 538
             A   Q+    A  P Q ST +  +G+A
Sbjct: 369 ISAPSEQMVDTPASEPAQASTPTDPKGLA 397


>gi|25092733 purinergic receptor P2X2 isoform D [Homo sapiens]
          Length = 497

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 460 PSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPA-------- 511
           PSH S    + P     +LG+  P+       Q   P SGQ+     E  PA        
Sbjct: 410 PSHPS---GSWPVTLARVLGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCP 466

Query: 512 --AEKAQLKSEAAGSPDQGSTYSPARGVA 538
             A   Q+    A  P Q ST +  +G+A
Sbjct: 467 ISAPSEQMVDTPASEPAQASTPTDPKGLA 495


>gi|25092719 purinergic receptor P2X2 isoform A [Homo sapiens]
          Length = 471

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 460 PSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPA-------- 511
           PSH S    + P     +LG+  P+       Q   P SGQ+     E  PA        
Sbjct: 384 PSHPS---GSWPVTLARVLGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCP 440

Query: 512 --AEKAQLKSEAAGSPDQGSTYSPARGVA 538
             A   Q+    A  P Q ST +  +G+A
Sbjct: 441 ISAPSEQMVDTPASEPAQASTPTDPKGLA 469


>gi|7706629 purinergic receptor P2X2 isoform C [Homo sapiens]
          Length = 447

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 460 PSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPA-------- 511
           PSH S    + P     +LG+  P+       Q   P SGQ+     E  PA        
Sbjct: 360 PSHPS---GSWPVTLARVLGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCP 416

Query: 512 --AEKAQLKSEAAGSPDQGSTYSPARGVA 538
             A   Q+    A  P Q ST +  +G+A
Sbjct: 417 ISAPSEQMVDTPASEPAQASTPTDPKGLA 445


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 450 AEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQ-DTSGNTEG 508
           AE     T  PS  S  L + P  T       TP  SS  S+ S  PV  +   + +TE 
Sbjct: 437 AEDTSIATSTPSEGSTPLTSMPVST-------TPVASSEASNLSTTPVDSKTQVTTSTEA 489

Query: 509 SPAAEKAQLKSEAAGSPDQGST 530
           S +   A++ S    +P +GST
Sbjct: 490 SSSPPTAEVNSMPTSTPSEGST 511


>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
           polypeptide A) phosphatase, subunit 1 isoform FCP1b
           [Homo sapiens]
          Length = 867

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 485 ESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVA 538
           ESS+ES  +    S  D  G +EG    +K +   E AG+  QGS+  P R  A
Sbjct: 459 ESSSESEGTKSSSSASD--GESEGKRGRQKPKAAPEGAGALAQGSSLEPGRPAA 510


>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
           polypeptide A) phosphatase, subunit 1 isoform FCP1a
           [Homo sapiens]
          Length = 961

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 485 ESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVA 538
           ESS+ES  +    S  D  G +EG    +K +   E AG+  QGS+  P R  A
Sbjct: 459 ESSSESEGTKSSSSASD--GESEGKRGRQKPKAAPEGAGALAQGSSLEPGRPAA 510


>gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]
          Length = 202

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 24/115 (20%)

Query: 365 GPESEP-PQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQM-GPTEQGPYAKTYEGRREI 422
           GP+ EP P+ LRPR          +P  G G+ D   R ++   TEQ P           
Sbjct: 72  GPKGEPDPRGLRPR----------KPVPGTGNRDSGTRRRLQDATEQDPRPGN------- 114

Query: 423 LRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKP-KETGG 476
               DV      G  SP  +RA D      R  P  +P   +P  D +P +E GG
Sbjct: 115 ----DVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGG 165


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)

Query: 471 PKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGST 530
           P+    +L  G   E   E +++      +++ G ++G P A  ++  + AAGSP  G+ 
Sbjct: 45  PRAPRDVLPHG--HEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGA- 101

Query: 531 YSPARGVAGPRGQDPVS 547
            + ARG AGP G  P S
Sbjct: 102 -AAARGAAGP-GPGPPS 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,156,968
Number of Sequences: 37866
Number of extensions: 1226573
Number of successful extensions: 4833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 4671
Number of HSP's gapped (non-prelim): 265
length of query: 551
length of database: 18,247,518
effective HSP length: 107
effective length of query: 444
effective length of database: 14,195,856
effective search space: 6302960064
effective search space used: 6302960064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.