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Search of human proteins with 114199473
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|114199473 vacuolar protein sorting 41 isoform 2 [Homo
sapiens]
(829 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|114199473 vacuolar protein sorting 41 isoform 2 [Homo sapiens] 1679 0.0
gi|114199475 vacuolar protein sorting 41 isoform 1 [Homo sapiens] 1665 0.0
gi|17978477 vacuolar protein sorting 11 [Homo sapiens] 48 4e-05
gi|17978485 vacuolar protein sorting 18 [Homo sapiens] 45 3e-04
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 38 0.044
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 37 0.098
gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo ... 35 0.22
gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo ... 35 0.22
gi|190194429 zinc finger protein 267 [Homo sapiens] 35 0.37
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 34 0.49
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 34 0.49
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 34 0.49
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.49
gi|29337286 eukaryotic translation initiation factor 2C, 3 isofo... 34 0.64
gi|29294647 eukaryotic translation initiation factor 2C, 3 isofo... 34 0.64
gi|4758788 NADH dehydrogenase (ubiquinone) Fe-S protein 3 precur... 33 0.83
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 33 0.83
gi|4758012 clathrin heavy chain 1 [Homo sapiens] 33 1.1
gi|17975763 myelin transcription factor 1 [Homo sapiens] 33 1.4
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 1.9
gi|18375505 APEX nuclease 1 [Homo sapiens] 32 2.4
gi|18375503 APEX nuclease 1 [Homo sapiens] 32 2.4
gi|18375501 APEX nuclease 1 [Homo sapiens] 32 2.4
gi|115495445 ankyrin repeat domain 30A [Homo sapiens] 32 2.4
gi|46276863 parathymosin [Homo sapiens] 32 2.4
>gi|114199473 vacuolar protein sorting 41 isoform 2 [Homo sapiens]
Length = 829
Score = 1679 bits (4347), Expect = 0.0
Identities = 829/829 (100%), Positives = 829/829 (100%)
Query: 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL 60
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
Sbjct: 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL 60
Query: 61 GTHYGKVYLLDVQGNITQKFDVVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFV 120
GTHYGKVYLLDVQGNITQKFDVVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFV
Sbjct: 61 GTHYGKVYLLDVQGNITQKFDVVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFV 120
Query: 121 TGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN 180
TGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN
Sbjct: 121 TGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN 180
Query: 181 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHASEMRDLPSRYVEIVSQF 240
VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHASEMRDLPSRYVEIVSQF
Sbjct: 181 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHASEMRDLPSRYVEIVSQF 240
Query: 241 ETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSETCEEISSDALTVR 300
ETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSETCEEISSDALTVR
Sbjct: 241 ETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSETCEEISSDALTVR 300
Query: 301 GFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEIS 360
GFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEIS
Sbjct: 301 GFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEIS 360
Query: 361 QKNIKRHKILDIGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAI 420
QKNIKRHKILDIGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAI
Sbjct: 361 QKNIKRHKILDIGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAI 420
Query: 421 SPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDS 480
SPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDS
Sbjct: 421 SPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDS 480
Query: 481 QNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSE 540
QNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSE
Sbjct: 481 QNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSE 540
Query: 541 KAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDR 600
KAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDR
Sbjct: 541 KAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDR 600
Query: 601 PNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIE 660
PNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIE
Sbjct: 601 PNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIE 660
Query: 661 FAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVK 720
FAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVK
Sbjct: 661 FAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVK 720
Query: 721 ILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPILPSDAAK 780
ILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPILPSDAAK
Sbjct: 721 ILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPILPSDAAK 780
Query: 781 PFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK 829
PFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK
Sbjct: 781 PFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK 829
>gi|114199475 vacuolar protein sorting 41 isoform 1 [Homo sapiens]
Length = 854
Score = 1665 bits (4311), Expect = 0.0
Identities = 829/854 (97%), Positives = 829/854 (97%), Gaps = 25/854 (2%)
Query: 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL 60
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
Sbjct: 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL 60
Query: 61 GTHYGKVYLLDVQGNITQKFDV-------------------------VQVFGLYSGEEFH 95
GTHYGKVYLLDVQGNITQKFDV VQVFGLYSGEEFH
Sbjct: 61 GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH 120
Query: 96 ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR 155
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR
Sbjct: 121 ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR 180
Query: 156 GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV 215
GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV
Sbjct: 181 GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV 240
Query: 216 CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA 275
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA
Sbjct: 241 CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA 300
Query: 276 RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER 335
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
Sbjct: 301 RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER 360
Query: 336 DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK 395
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK
Sbjct: 361 DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK 420
Query: 396 ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI 455
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
Sbjct: 421 ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI 480
Query: 456 REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF 515
REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
Sbjct: 481 REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF 540
Query: 516 QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK 575
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
Sbjct: 541 QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK 600
Query: 576 LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL 635
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
Sbjct: 601 LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL 660
Query: 636 SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH 695
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
Sbjct: 661 SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH 720
Query: 696 VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM 755
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
Sbjct: 721 VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM 780
Query: 756 KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA 815
KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA
Sbjct: 781 KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA 840
Query: 816 KNRGPGSAILEMKK 829
KNRGPGSAILEMKK
Sbjct: 841 KNRGPGSAILEMKK 854
>gi|17978477 vacuolar protein sorting 11 [Homo sapiens]
Length = 941
Score = 47.8 bits (112), Expect = 4e-05
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 38/298 (12%)
Query: 538 DSEKAVDMLLDN--EDKISIKKVVEELEDRPELQHVYLHKLFKRD--HHKGQRYHEKQIS 593
+SE+ + + +N E K ++ + E D P+ + L +L ++ H K + EK
Sbjct: 589 NSEEFIPIFANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEK--- 645
Query: 594 LYAEYDRPNLLPFLRDSTHCPL-EKALEICQQRNFVEETVYLL--SRMGNSRSALKMIME 650
L+AE + L+ C + +KAL +CQ +F + +YL ++ M E
Sbjct: 646 LHAE-----AISLLKSGRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHE 700
Query: 651 ELHDVDKAIEFAKEQDDGELWEDLILY----SIDKPPFITGLLNNIGTH--VDPILLIHR 704
+ V E EQD LWE + Y D ++ +L +I + P+L++
Sbjct: 701 QYRQVISVCERHGEQDP-SLWEQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQT 759
Query: 705 IKEG--MEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDE 762
+ + +RD LV+ LQ + QI E + ++ + +++ + + +
Sbjct: 760 LAHNSTATLSVIRDYLVQKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQK 819
Query: 763 E--NICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNR 818
+IC S L LPS V F C H FH+ C S + A C C +NR
Sbjct: 820 TKCSICNSALE--LPS--------VHFLCGHSFHQHCFESYSESDAD--CPTCLPENR 865
Score = 37.4 bits (85), Expect = 0.058
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 315 SEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGL 374
+E SL+ + V +E+D ++ L +K +E A+ A+ +++ + I +
Sbjct: 335 AEWGSLYVLTRDGRVHALQEKDTQTKLEMLFKKNLFEMAINLAK--SQHLDSDGLAQIFM 392
Query: 375 AYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYL 424
Y +HL +G++D A ++ + +GK Y + KF + ++ ++ YL
Sbjct: 393 QYGDHLYSKGNHDGAVQQYIRTIGKLEP--SYVIRKFLDAQRIHNLTAYL 440
>gi|17978485 vacuolar protein sorting 18 [Homo sapiens]
Length = 973
Score = 45.1 bits (105), Expect = 3e-04
Identities = 46/227 (20%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 585 QRYHEKQISLYAEYDRPNLLPFLRDS------THCPLEKALEICQQRNFVEETVYLLSRM 638
Q H +SLYA +LL +L + H L+ AL +C + V++ +
Sbjct: 661 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL 720
Query: 639 GNSRSALKMIMEELHDVDKAIEFAKEQDDG---ELWEDLILYSIDKPPFITGLLNNIGTH 695
A+ + ++ D+ K E+D+ +LW + + + + + + + +
Sbjct: 721 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC 780
Query: 696 VDPILLIHRI----KEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMH 751
P+L I + + + I + ++++ L+ YN I + + A + + + +
Sbjct: 781 --PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQ 838
Query: 752 RTQMKGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECL 798
+ + V+ ++ C +C P+L +PF +F C HMFH +CL
Sbjct: 839 ELRGRYGTVEPQDKCATCDFPLLN----RPF--YLFLCGHMFHADCL 879
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 37.7 bits (86), Expect = 0.044
Identities = 23/45 (51%), Positives = 24/45 (53%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDA 47
E EEQE EE +E EEEE EEE K E LS E QK A
Sbjct: 865 EEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQA 909
Score = 30.8 bits (68), Expect = 5.4
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 2 AEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKD 46
+E EE+E EE +E EEEE EEE + + E G E L D
Sbjct: 859 SEEEEEEE---EEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLD 900
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sapiens]
Length = 2211
Score = 36.6 bits (83), Expect = 0.098
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGT 62
E EE+E+ S EES+ E EE E EEE E G+ E++++ ++LA G
Sbjct: 951 EGEEEESSSSEESSSEEEEMEEEEEE----EEFGPGMQEVIEQHKFEA----HRWLARGK 1002
Query: 63 HYGKVYL--------------LDVQ---GNITQKFDVVQVFGLYSGEEFHETFDCPIK 103
++ + +VQ GN+ + V+ GEE+ +T + P+K
Sbjct: 1003 EDNELVVELVPAGKPGPERNTYEVQVVTGNVPKAGTDANVYLTIYGEEYGDTGERPLK 1060
>gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo
sapiens]
Length = 1583
Score = 35.4 bits (80), Expect = 0.22
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 629 EETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGL 688
EE + + + SA+++++E + ++D+A EFA+ ++ +W L + K +
Sbjct: 1066 EEAFTVFHKFDMNASAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLAQAQLQK-DLVKEA 1124
Query: 689 LNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQ 723
+N+ DP + ++ N D LVK LQ
Sbjct: 1125 INSYIRGDDPSSYLEVVQSASRSNNWED-LVKFLQ 1158
>gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo
sapiens]
Length = 1640
Score = 35.4 bits (80), Expect = 0.22
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 629 EETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGL 688
EE + + + SA+++++E + ++D+A EFA+ ++ +W L + K +
Sbjct: 1066 EEAFTVFHKFDMNASAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLAQAQLQK-DLVKEA 1124
Query: 689 LNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQ 723
+N+ DP + ++ N D LVK LQ
Sbjct: 1125 INSYIRGDDPSSYLEVVQSASRSNNWED-LVKFLQ 1158
>gi|190194429 zinc finger protein 267 [Homo sapiens]
Length = 743
Score = 34.7 bits (78), Expect = 0.37
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 497 KNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDK--IVLLMDFDSEKAVDMLLDNEDKIS 554
+NY N + + L + D+ + + ++K + + + D S D+L ++ + S
Sbjct: 35 ENYRNLVSLGLVVSKPDLITFLEQRKEPWNVKSEETVAIQPDVFSHYNKDLLTEHCTEAS 94
Query: 555 IKKVVEELEDRPELQHVYLHKLFKRDHHKGQR--YHEKQISLYAEYDRPNL 603
+KV+ +L++++L K +KR+ +G Y EK Y ++D ++
Sbjct: 95 FQKVISRRHGSCDLENLHLRKRWKREECEGHNGCYDEKTFK-YDQFDESSV 144
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 285 EEEEEEEGSTSEESEEEEEEEEEEE 309
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 286 EEEEEEGSTSEESEEEEEEEEEEEE 310
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 306 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 338
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 281 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 315
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 295 EEEEEEEGSTSEESEEEEEEEEEEE 319
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 296 EEEEEEGSTSEESEEEEEEEEEEEE 320
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 316 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 348
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 291 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 325
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 34.3 bits (77), Expect = 0.49
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 5 EEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQK 45
+E+E G+ E D EEEE EEE + + E G E+LQ+
Sbjct: 795 KEEEEGARREGADMEEEEEEEEEEEEEEEEEGAGGVELLQE 835
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 286 EEEEEEEGSTSEESEEEEEEEEEEE 310
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 287 EEEEEEGSTSEESEEEEEEEEEEEE 311
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 307 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 339
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 282 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 316
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 295 EEEEEEEGSTSEESEEEEEEEEEEE 319
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 296 EEEEEEGSTSEESEEEEEEEEEEEE 320
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 316 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 348
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 291 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 325
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 263 EEEEEEEGSTSEESEEEEEEEEEEE 287
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 264 EEEEEEGSTSEESEEEEEEEEEEEE 288
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 284 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 316
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 259 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 293
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 252 EEEEEEEGSTSEESEEEEEEEEEEE 276
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 253 EEEEEEGSTSEESEEEEEEEEEEEE 277
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 273 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 305
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 248 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 282
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins)
isoform 3 [Homo sapiens]
Length = 526
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 41 EEEEEEEGSTSEESEEEEEEEEEEE 65
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 42 EEEEEEGSTSEESEEEEEEEEEEEE 66
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 62 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 94
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 37 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 71
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 34.3 bits (77), Expect = 0.49
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E GS E ++E EEEE EEE
Sbjct: 297 EEEEEEEGSTSEESEEEEEEEEEEE 321
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 EAEEQETGSLEESTDESEEEESEEE 27
E EE+E + EES +E EEEE EEE
Sbjct: 298 EEEEEEGSTSEESEEEEEEEEEEEE 322
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 EAEEQETGS-LEESTDESEEEESEEEPKLKYER 34
E EE+ETGS EE++++S EE SEEE ER
Sbjct: 318 EEEEEETGSNSEEASEQSAEEVSEEEMSEDEER 350
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSN 37
E EE+E E ST E EEE EEE + + E SN
Sbjct: 293 EEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSN 327
>gi|29337286 eukaryotic translation initiation factor 2C, 3 isoform
b [Homo sapiens]
Length = 626
Score = 33.9 bits (76), Expect = 0.64
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 273 YCA-----RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEG---ESLFY-I 323
YCA RPR +IIQ L+ E+ F+ Y SEG + L+Y +
Sbjct: 392 YCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYEL 451
Query: 324 VSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQK 362
++ R+ ++ E+D I +++ +K++ L A+ +++
Sbjct: 452 LAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTER 490
>gi|29294647 eukaryotic translation initiation factor 2C, 3 isoform
a [Homo sapiens]
Length = 860
Score = 33.9 bits (76), Expect = 0.64
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 273 YCA-----RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEG---ESLFY-I 323
YCA RPR +IIQ L+ E+ F+ Y SEG + L+Y +
Sbjct: 626 YCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYEL 685
Query: 324 VSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQK 362
++ R+ ++ E+D I +++ +K++ L A+ +++
Sbjct: 686 LAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTER 724
>gi|4758788 NADH dehydrogenase (ubiquinone) Fe-S protein 3 precursor
[Homo sapiens]
Length = 264
Score = 33.5 bits (75), Expect = 0.83
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 587 YHEKQISLYAEYDRPNLLPFLRDSTHCPLEK-----ALEICQQRNFVEETVYLLSRMGNS 641
++E ++ ++ + P +L FLRD T+ + A+++ ++N E LLS NS
Sbjct: 81 FNELEVCIHPDGVIP-VLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNS 139
Query: 642 RSALKMIMEELHDVDKAIEFAKEQD--DGELWEDLILYSIDKP 682
R +K +EL ++ A+ K + + E+W+ ++ + P
Sbjct: 140 RIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHP 182
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 33.5 bits (75), Expect = 0.83
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTE 41
+ E EE+E S+EES D+ + ESE + K + L +G+++
Sbjct: 268 LEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGISD 308
>gi|4758012 clathrin heavy chain 1 [Homo sapiens]
Length = 1675
Score = 33.1 bits (74), Expect = 1.1
Identities = 16/83 (19%), Positives = 38/83 (45%)
Query: 599 DRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKA 658
DR ++ ++ + I EE + + + SA+++++E + ++D+A
Sbjct: 1036 DRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRA 1095
Query: 659 IEFAKEQDDGELWEDLILYSIDK 681
EFA+ ++ +W L + K
Sbjct: 1096 YEFAERCNEPAVWSQLAKAQLQK 1118
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 32.7 bits (73), Expect = 1.4
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAA 48
E EE+E EE +E EEEE EEE + + E I Q+D +
Sbjct: 273 EDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Score = 31.6 bits (70), Expect = 3.2
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYE 33
E EE+E EE DE EEEE EEE + + E
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290
Score = 31.2 bits (69), Expect = 4.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAAS 49
E +E+E EE +E EEEE EEE + + E +++ ++ S
Sbjct: 272 EEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAA 48
E EE+E E+ +E EEEE EEE + + E E +++AA
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Score = 30.4 bits (67), Expect = 7.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYE 33
E EE+E EE +E EEEE EEE + + E
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEE 292
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 32.3 bits (72), Expect = 1.9
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYE 33
E EE+E EE DE EEEE EEE + + E
Sbjct: 734 EEEEEEEDEEEEEEDEEEEEEEEEEEEEEEE 764
Score = 30.8 bits (68), Expect = 5.4
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGV 39
E EE+E EE +E EEEE EEE + + E + V
Sbjct: 740 EDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAV 776
Score = 30.8 bits (68), Expect = 5.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEIL 43
E EE+E EE +E EEEE EEE + + + + E+L
Sbjct: 742 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVL 782
Score = 30.4 bits (67), Expect = 7.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 3 EAEEQETGSLEESTDESEEEESEEEPKLKYE 33
E EE+E EE +E EEEE EEE + + E
Sbjct: 735 EEEEEEDEEEEEEDEEEEEEEEEEEEEEEEE 765
>gi|18375505 APEX nuclease 1 [Homo sapiens]
Length = 318
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 535 MDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISL 594
+D+ E+A D+L E K S K+ EL++ P L H Y ++ + G +Q L
Sbjct: 81 LDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPL 140
Query: 595 YAEY 598
Y
Sbjct: 141 KVSY 144
>gi|18375503 APEX nuclease 1 [Homo sapiens]
Length = 318
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 535 MDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISL 594
+D+ E+A D+L E K S K+ EL++ P L H Y ++ + G +Q L
Sbjct: 81 LDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPL 140
Query: 595 YAEY 598
Y
Sbjct: 141 KVSY 144
>gi|18375501 APEX nuclease 1 [Homo sapiens]
Length = 318
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 535 MDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISL 594
+D+ E+A D+L E K S K+ EL++ P L H Y ++ + G +Q L
Sbjct: 81 LDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPL 140
Query: 595 YAEY 598
Y
Sbjct: 141 KVSY 144
>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
Length = 1341
Score = 32.0 bits (71), Expect = 2.4
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 238 SQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSETCEEISSDAL 297
S FE+ I P V+ +E+ E ++ +P +++ + E+ ++
Sbjct: 430 SLFESSAKIQVCIPESIYQKVMEINREVEEPPKKPSAFKPAIEMQNSVPNKAFELKNEQ- 488
Query: 298 TVRGFQ----ENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQD--DHIDWLLEKKKYE 351
T+R E++ +DY + ESL VS +DV + K Q D I+ LE+ +
Sbjct: 489 TLRADPMFPPESKQKDYEENSWDSESLCETVSQKDVCLPKATHQKEIDKINGKLEESPNK 548
Query: 352 EALMAAEISQK 362
+ L+ A K
Sbjct: 549 DGLLKATCGMK 559
Score = 30.0 bits (66), Expect = 9.2
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 21/162 (12%)
Query: 215 VCSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYC 274
VC K H E+ + + E ++ GL + V K + K + +
Sbjct: 524 VCLPKATHQKEIDKINGKLEESPNK-------DGLLKATCGMKVSIPTKALELKDMQTFK 576
Query: 275 ARP--RLDIIQPLSETCEEISSDALTVRGFQ----------ENECRDYHLEYSEGESLFY 322
A P + +P +E + + + AL ++ Q E++ +DY + ESL
Sbjct: 577 AEPPGKPSAFEPATEMQKSVPNKALELKNEQTLRADEILPSESKQKDYEENSWDTESLCE 636
Query: 323 IVSPRDVVVAKERDQD--DHIDWLLEKKKYEEALMAAEISQK 362
VS +DV + K Q D I+ LE ++ L+ A K
Sbjct: 637 TVSQKDVCLPKAAHQKEIDKINGKLEGSPVKDGLLKANCGMK 678
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 32.0 bits (71), Expect = 2.4
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 2 AEAEEQETGSLEESTDESEEEESEEE 27
AE EE+ET E DE EEE+ EEE
Sbjct: 45 AEEEEEETAEDGEEEDEGEEEDEEEE 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,581,486
Number of Sequences: 37866
Number of extensions: 1441289
Number of successful extensions: 9698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 8904
Number of HSP's gapped (non-prelim): 616
length of query: 829
length of database: 18,247,518
effective HSP length: 111
effective length of query: 718
effective length of database: 14,044,392
effective search space: 10083873456
effective search space used: 10083873456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.