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Search of human proteins with 218505694
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218505694 potassium channel tetramerisation domain
containing 1 isoform b [Homo sapiens]
(865 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218505694 potassium channel tetramerisation domain containing... 1761 0.0
gi|209969708 potassium channel tetramerisation domain containing... 525 e-149
gi|40217617 potassium channel tetramerisation domain containing ... 525 e-149
gi|194018443 potassium channel tetramerisation domain containing... 427 e-119
gi|194018441 potassium channel tetramerisation domain containing... 427 e-119
gi|194018439 potassium channel tetramerisation domain containing... 354 2e-97
gi|189571693 potassium channel tetramerisation domain containing... 110 7e-24
gi|189571691 potassium channel tetramerisation domain containing... 110 7e-24
gi|71143104 potassium channel tetramerisation domain containing ... 102 2e-21
gi|146198864 potassium channel tetramerisation domain containing... 88 3e-17
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] 76 1e-13
gi|27734697 potassium channel regulator isoform 1 [Homo sapiens] 76 1e-13
gi|19923973 potassium channel tetramerisation domain containing ... 72 2e-12
gi|55926200 potassium channel tetramerisation domain containing ... 70 1e-11
gi|38198663 potassium channel tetramerisation domain containing ... 69 1e-11
gi|155369221 potassium channel tetramerisation domain containing... 68 3e-11
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 62 2e-09
gi|215422388 death-domain associated protein isoform a [Homo sap... 62 2e-09
gi|215422366 death-domain associated protein isoform b [Homo sap... 62 2e-09
gi|23308551 potassium channel tetramerisation domain containing ... 62 2e-09
gi|21735415 centromere protein B [Homo sapiens] 62 2e-09
gi|142356950 potassium channel tetramerisation domain containing... 61 4e-09
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 60 1e-08
gi|51036594 potassium channel tetramerisation domain containing ... 58 4e-08
gi|13994353 potassium channel tetramerisation domain containing ... 57 7e-08
gi|38788260 bromodomain PHD finger transcription factor isoform ... 55 2e-07
gi|38788274 bromodomain PHD finger transcription factor isoform ... 55 2e-07
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 55 3e-07
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 55 3e-07
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 55 4e-07
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 1761 bits (4562), Expect = 0.0
Identities = 865/865 (100%), Positives = 865/865 (100%)
Query: 1 MARMPGSGDCNTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEE 60
MARMPGSGDCNTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEE
Sbjct: 1 MARMPGSGDCNTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEE 60
Query: 61 EEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPEPV 120
EEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPEPV
Sbjct: 61 EEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPEPV 120
Query: 121 HMINMDQSAALEPEAPPRLLAPRARGGPPGDGSELDPDVLQRPERARLSENTRLATRYAV 180
HMINMDQSAALEPEAPPRLLAPRARGGPPGDGSELDPDVLQRPERARLSENTRLATRYAV
Sbjct: 121 HMINMDQSAALEPEAPPRLLAPRARGGPPGDGSELDPDVLQRPERARLSENTRLATRYAV 180
Query: 181 RIFREYLSEKAQSPDFETMDKGALCRVLRSFYAEARSKSGQLYSKSSLISIRSSLNRYLN 240
RIFREYLSEKAQSPDFETMDKGALCRVLRSFYAEARSKSGQLYSKSSLISIRSSLNRYLN
Sbjct: 181 RIFREYLSEKAQSPDFETMDKGALCRVLRSFYAEARSKSGQLYSKSSLISIRSSLNRYLN 240
Query: 241 EPPYCRTLDLTKDPELRSANLTLAAVIRKLEEQGAGPVVQKQAITRADLRKLYTSSVFST 300
EPPYCRTLDLTKDPELRSANLTLAAVIRKLEEQGAGPVVQKQAITRADLRKLYTSSVFST
Sbjct: 241 EPPYCRTLDLTKDPELRSANLTLAAVIRKLEEQGAGPVVQKQAITRADLRKLYTSSVFST 300
Query: 301 NTPFGLLNKVWFETCMYFCTRGRENQRELEEDSFGLAMDEDGRKFVYFKSLGPYHKSRSS 360
NTPFGLLNKVWFETCMYFCTRGRENQRELEEDSFGLAMDEDGRKFVYFKSLGPYHKSRSS
Sbjct: 301 NTPFGLLNKVWFETCMYFCTRGRENQRELEEDSFGLAMDEDGRKFVYFKSLGPYHKSRSS 360
Query: 361 SWSKKRAESSDEENLPRMYETGTEFCPYASFVKYLSKRNPLCKAFFQRPRDHCSEGDVTW 420
SWSKKRAESSDEENLPRMYETGTEFCPYASFVKYLSKRNPLCKAFFQRPRDHCSEGDVTW
Sbjct: 361 SWSKKRAESSDEENLPRMYETGTEFCPYASFVKYLSKRNPLCKAFFQRPRDHCSEGDVTW 420
Query: 421 YENKAIGKNLLGTRMQMLSKAAKLSKTYTNHCIGAVSIATLNSIAGIGTKLGSPAPQGCY 480
YENKAIGKNLLGTRMQMLSKAAKLSKTYTNHCIGAVSIATLNSIAGIGTKLGSPAPQGCY
Sbjct: 421 YENKAIGKNLLGTRMQMLSKAAKLSKTYTNHCIGAVSIATLNSIAGIGTKLGSPAPQGCY 480
Query: 481 AEALNGAARHHSHHPPTHPSHHHRPQPPSLGNTYILPKDSQVGPDVKSEAAPKRALYESV 540
AEALNGAARHHSHHPPTHPSHHHRPQPPSLGNTYILPKDSQVGPDVKSEAAPKRALYESV
Sbjct: 481 AEALNGAARHHSHHPPTHPSHHHRPQPPSLGNTYILPKDSQVGPDVKSEAAPKRALYESV 540
Query: 541 FGSGEICGPTSPKRLCIRPSEPVDAVVVVSVKHDPLPLLPEANGHRSTNSPTIVSPAIVS 600
FGSGEICGPTSPKRLCIRPSEPVDAVVVVSVKHDPLPLLPEANGHRSTNSPTIVSPAIVS
Sbjct: 541 FGSGEICGPTSPKRLCIRPSEPVDAVVVVSVKHDPLPLLPEANGHRSTNSPTIVSPAIVS 600
Query: 601 PTQDSRPNMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYP 660
PTQDSRPNMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYP
Sbjct: 601 PTQDSRPNMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYP 660
Query: 661 ESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEA 720
ESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEA
Sbjct: 661 ESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEA 720
Query: 721 KYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIG 780
KYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIG
Sbjct: 721 KYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIG 780
Query: 781 DVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSE 840
DVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSE
Sbjct: 781 DVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSE 840
Query: 841 YVLRRELRRTPRVPSVIRIKQEPLD 865
YVLRRELRRTPRVPSVIRIKQEPLD
Sbjct: 841 YVLRRELRRTPRVPSVIRIKQEPLD 865
>gi|209969708 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 525 bits (1352), Expect = e-149
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 609 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 668
MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF
Sbjct: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60
Query: 669 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 728
DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM
Sbjct: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120
Query: 729 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 788
LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN
Sbjct: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180
Query: 789 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 848
AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR
Sbjct: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240
Query: 849 RTPRVPSVIRIKQEPLD 865
RTPRVPSVIRIKQEPLD
Sbjct: 241 RTPRVPSVIRIKQEPLD 257
>gi|40217617 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 525 bits (1352), Expect = e-149
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 609 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 668
MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF
Sbjct: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60
Query: 669 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 728
DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM
Sbjct: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120
Query: 729 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 788
LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN
Sbjct: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180
Query: 789 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 848
AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR
Sbjct: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240
Query: 849 RTPRVPSVIRIKQEPLD 865
RTPRVPSVIRIKQEPLD
Sbjct: 241 RTPRVPSVIRIKQEPLD 257
>gi|194018443 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 427 bits (1099), Expect = e-119
Identities = 206/258 (79%), Positives = 229/258 (88%)
Query: 608 NMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRL 667
NMSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RL
Sbjct: 26 NMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRL 85
Query: 668 FDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQP 727
F+GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQP
Sbjct: 86 FNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQP 145
Query: 728 MLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSV 787
M+ E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSV
Sbjct: 146 MVRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSV 205
Query: 788 NAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRREL 847
NAGWN D THVIRFPLNGYC LNSVQVLERL QRGF + SCGGGVDSSQFSEYVL RE
Sbjct: 206 NAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREE 265
Query: 848 RRTPRVPSVIRIKQEPLD 865
RR P+ +RIKQEPLD
Sbjct: 266 RRPQPTPTAVRIKQEPLD 283
>gi|194018441 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 427 bits (1099), Expect = e-119
Identities = 206/258 (79%), Positives = 229/258 (88%)
Query: 608 NMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRL 667
NMSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RL
Sbjct: 26 NMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRL 85
Query: 668 FDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQP 727
F+GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQP
Sbjct: 86 FNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQP 145
Query: 728 MLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSV 787
M+ E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSV
Sbjct: 146 MVRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSV 205
Query: 788 NAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRREL 847
NAGWN D THVIRFPLNGYC LNSVQVLERL QRGF + SCGGGVDSSQFSEYVL RE
Sbjct: 206 NAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREE 265
Query: 848 RRTPRVPSVIRIKQEPLD 865
RR P+ +RIKQEPLD
Sbjct: 266 RRPQPTPTAVRIKQEPLD 283
>gi|194018439 potassium channel tetramerisation domain containing 15
isoform 1 [Homo sapiens]
Length = 234
Score = 354 bits (909), Expect = 2e-97
Identities = 168/206 (81%), Positives = 188/206 (91%)
Query: 608 NMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRL 667
NMSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RL
Sbjct: 26 NMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRL 85
Query: 668 FDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQP 727
F+GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQP
Sbjct: 86 FNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQP 145
Query: 728 MLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSV 787
M+ E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSV
Sbjct: 146 MVRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSV 205
Query: 788 NAGWNHDSTHVIRFPLNGYCHLNSVQ 813
NAGWN D THVIRFPLNGYC LNSVQ
Sbjct: 206 NAGWNQDPTHVIRFPLNGYCRLNSVQ 231
>gi|189571693 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 110 bits (274), Expect = 7e-24
Identities = 49/91 (53%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 639 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 698
PV ++VGGH+YT+SL TLT+YP+S +G +F G P D + +YFIDRDG +FRY+LNF
Sbjct: 13 PVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDP-QGNYFIDRDGPLFRYVLNF 71
Query: 699 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
LRTS+L +P DFK++ LL +EA ++Q++P++
Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLI 102
>gi|189571691 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 110 bits (274), Expect = 7e-24
Identities = 49/91 (53%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 639 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 698
PV ++VGGH+YT+SL TLT+YP+S +G +F G P D + +YFIDRDG +FRY+LNF
Sbjct: 13 PVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDP-QGNYFIDRDGPLFRYVLNF 71
Query: 699 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
LRTS+L +P DFK++ LL +EA ++Q++P++
Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLI 102
>gi|71143104 potassium channel tetramerisation domain containing 21
[Homo sapiens]
Length = 260
Score = 102 bits (253), Expect = 2e-21
Identities = 48/91 (52%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 639 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 698
P+ ++VGG +YT+SLATLT +P+S +G +F G P DS + + FIDRDG++FRYILNF
Sbjct: 4 PITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDS-QGNCFIDRDGKVFRYILNF 62
Query: 699 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
LRTS L +P+DF++ LL EA ++Q+QP++
Sbjct: 63 LRTSHLDLPEDFQEMGLLRREADFYQVQPLI 93
>gi|146198864 potassium channel tetramerisation domain containing 4
[Homo sapiens]
Length = 259
Score = 88.2 bits (217), Expect = 3e-17
Identities = 43/103 (41%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Query: 642 IDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRT 701
++VGG++Y + TLTKYP++ + + +G D+ HYFIDRDG +FR++LNFLR
Sbjct: 37 LNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCPFDA-DGHYFIDRDGLLFRHVLNFLRN 95
Query: 702 SKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME-RWKQDRETGR 743
+LL+P+ F++ LL +EA++FQL+ + E++ RW++++ T R
Sbjct: 96 GELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSRWEKEQLTPR 138
>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
Length = 229
Score = 76.3 bits (186), Expect = 1e-13
Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 699
V ++VGG ++T+ +T+ ++P SR+ R+ DG + + F+DRDG +F +IL+FL
Sbjct: 7 VTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQ-EFKMVGGQIFVDRDGDLFSFILDFL 65
Query: 700 RTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
RT +LL+P +F DY L EA +++L+ ++
Sbjct: 66 RTHQLLLPTEFSDYLRLQREALFYELRSLV 95
>gi|27734697 potassium channel regulator isoform 1 [Homo sapiens]
Length = 272
Score = 76.3 bits (186), Expect = 1e-13
Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 699
V ++VGG ++T+ +T+ ++P SR+ R+ DG + + F+DRDG +F +IL+FL
Sbjct: 7 VTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQ-EFKMVGGQIFVDRDGDLFSFILDFL 65
Query: 700 RTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
RT +LL+P +F DY L EA +++L+ ++
Sbjct: 66 RTHQLLLPTEFSDYLRLQREALFYELRSLV 95
>gi|19923973 potassium channel tetramerisation domain containing 12
[Homo sapiens]
Length = 325
Score = 72.0 bits (175), Expect = 2e-12
Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEP--IVLDSLKQHYFIDRDGQMFRYILN 697
V ++VGG +Y + T+ P+S + R+F +P + DS K +F+DRDG +FRYIL+
Sbjct: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
Query: 698 FLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
+LR +L++PD F + + L EA+YF+L ++
Sbjct: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
>gi|55926200 potassium channel tetramerisation domain containing 16
[Homo sapiens]
Length = 428
Score = 69.7 bits (169), Expect = 1e-11
Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLF----DGTEPIVLDSLKQHYFIDRDGQMFRYI 695
V ++VGG +Y + +TL P S + ++F D + DS K +FIDRDG +FRYI
Sbjct: 27 VELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDS-KGRFFIDRDGFLFRYI 85
Query: 696 LNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM--LLEMERWKQ-----------DRETG 742
L++LR ++++PD F + L EA+YFQL + LL + KQ D G
Sbjct: 86 LDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQG 145
Query: 743 RFSRPCE--------------CLVVRVAPDLGE------------RITLSGDKSLIEEVF 776
+R C + R + LG RI + G SL +EVF
Sbjct: 146 SDTRICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVF 205
Query: 777 PEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSS 836
E + + A + S ++F HL + + L + GF +V +C V +S
Sbjct: 206 GETLNESRDPDRAPERYTSRFYLKFK-----HLE--RAFDMLSECGFHMV-ACNSSVTAS 257
Query: 837 QFSEY 841
++Y
Sbjct: 258 FINQY 262
>gi|38198663 potassium channel tetramerisation domain containing 8
[Homo sapiens]
Length = 473
Score = 69.3 bits (168), Expect = 1e-11
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 613 LITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTE 672
+++ S + + P P + V ++VGG +Y + +TL P+S + +F +
Sbjct: 19 MVSSSSSPGASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDSTLASMFSPSS 78
Query: 673 P---------IVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYF 723
P + DS + +FIDRDG +FRY+L++LR +L +P+ F + L EA+YF
Sbjct: 79 PRGGARRRGELPRDS-RARFFIDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYF 137
Query: 724 QLQPML 729
QL ++
Sbjct: 138 QLTDLV 143
>gi|155369221 potassium channel tetramerisation domain containing 19
[Homo sapiens]
Length = 926
Score = 68.2 bits (165), Expect = 3e-11
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 699
+ + VG H Y ++L TL KYPE L + + + Q I DGQMFR+ILNFL
Sbjct: 398 IKVYVGSHWYATTLQTLLKYPE-----LLSNPQRVYWITYGQTLLIHGDGQMFRHILNFL 452
Query: 700 RTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLE-------MERWKQDRET 741
R KL +P +FK++ L +E + + + P L E + W Q++E+
Sbjct: 453 RLGKLFLPSEFKEWPLFCQEVEEYHI-PSLSEALAQCEAYKSWTQEKES 500
Score = 54.3 bits (129), Expect = 5e-07
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 641 HIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLR 700
H +VGG ++ + L+++P+S + + + S Q FIDRDG FR++ +L
Sbjct: 16 HFNVGGWHFSVPRSKLSQFPDSLLWK----EASALTSSESQRLFIDRDGSTFRHVHYYLY 71
Query: 701 TSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVA 756
TSKL + LLYE+A QL P+L ++ K+ + R RP + V A
Sbjct: 72 TSKLSF-SSCAELNLLYEQALGLQLMPLLQTLDNLKEGKHHLRV-RPADLPVAERA 125
Score = 42.7 bits (99), Expect = 0.001
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 692 FRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERW 735
FR+I+NFLR+ K+L+PD+F + +L E + ++ P L E RW
Sbjct: 211 FRFIVNFLRSQKILLPDNFSNIDVLEAEVEILEI-PALTEAVRW 253
Score = 33.5 bits (75), Expect = 0.87
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 648 MYTSSLATLTKYPESRIGRL-FDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLI 706
+YT +L L KYP+S +G+L + T LD +I +G +F+++ N+L T +L +
Sbjct: 286 LYTMALGLLVKYPDSALGQLRIEST----LDG--SRLYITGNGVLFQHVKNWLGTCRLPL 339
Query: 707 PDDFKD 712
+ +
Sbjct: 340 TETISE 345
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 62.4 bits (150), Expect = 2e-09
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 16 GSASAAAAAAENNGERGEGERGAGGRG-----RRHSRPHYCSAGEEEEEEEEEDEIQEVQ 70
G++S +A E + + GEG G +G R + +EEEEEEEE+E +E
Sbjct: 400 GTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEAT 459
Query: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDS--AGEELEPEPVHMINMDQS 128
+ +EE+ E G E+DEEE+EEEE D P S E EP I+
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSG 519
Query: 129 AALEPEAPPRLLAPRARGGPPGDGSELDPDVL-QRPERARLSENTRLATRYAVRI 182
E + R+++P P S +D + ++PE L E + ++ + + I
Sbjct: 520 ---EQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEI 571
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 62.4 bits (150), Expect = 2e-09
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 16 GSASAAAAAAENNGERGEGERGAGGRG-----RRHSRPHYCSAGEEEEEEEEEDEIQEVQ 70
G++S +A E + + GEG G +G R + +EEEEEEEE+E +E
Sbjct: 400 GTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEAT 459
Query: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDS--AGEELEPEPVHMINMDQS 128
+ +EE+ E G E+DEEE+EEEE D P S E EP I+
Sbjct: 460 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSG 519
Query: 129 AALEPEAPPRLLAPRARGGPPGDGSELDPDVL-QRPERARLSENTRLATRYAVRI 182
E + R+++P P S +D + ++PE L E + ++ + + I
Sbjct: 520 ---EQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEI 571
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 62.4 bits (150), Expect = 2e-09
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 16 GSASAAAAAAENNGERGEGERGAGGRG-----RRHSRPHYCSAGEEEEEEEEEDEIQEVQ 70
G++S +A E + + GEG G +G R + +EEEEEEEE+E +E
Sbjct: 412 GTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEAT 471
Query: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDS--AGEELEPEPVHMINMDQS 128
+ +EE+ E G E+DEEE+EEEE D P S E EP I+
Sbjct: 472 DSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSG 531
Query: 129 AALEPEAPPRLLAPRARGGPPGDGSELDPDVL-QRPERARLSENTRLATRYAVRI 182
E + R+++P P S +D + ++PE L E + ++ + + I
Sbjct: 532 ---EQQNKGRIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEI 583
>gi|23308551 potassium channel tetramerisation domain containing 7
[Homo sapiens]
Length = 289
Score = 62.4 bits (150), Expect = 2e-09
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 618 PASPLNNQ-GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVL 676
PA+P Q G P + V +++GG +T+ L+TL Y ++ + +F G I
Sbjct: 30 PATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFSGRHYIPT 89
Query: 677 DSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME 733
DS + YFIDRDG F +LNFLR+ L + + +Y+EA+Y+ + P+L ++E
Sbjct: 90 DS-EGRYFIDRDGTHFGDVLNFLRSGDLPPRERVR---AVYKEAQYYAIGPLLEQLE 142
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 62.0 bits (149), Expect = 2e-09
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 35 ERGAGGRGRRHSRPHYCSAGEEEEEEEEEDEIQEVQITGD----EEEEEDGGGGLEEDEE 90
E G GG S GEEEEEEEEE+E +E + + EEEEE+GG G E EE
Sbjct: 386 EAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEE 445
Query: 91 EEEEEEMGLDWD-EPLEPEDSAGEELEPE 118
EE EEE +D D E E E+S+ E LE E
Sbjct: 446 EEVEEEGDVDSDEEEEEDEESSSEGLEAE 474
Score = 42.4 bits (98), Expect = 0.002
Identities = 38/104 (36%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 8 GDCNTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEEEEEDEIQ 67
G N + S + E E E E G G EE EEEEEE
Sbjct: 391 GGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEE-----------EEGEEEEEEG--G 437
Query: 68 EVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSA 111
E + G+EEE E+ G ++ DEEEEE+EE E LE ED A
Sbjct: 438 EGEELGEEEEVEE-EGDVDSDEEEEEDEESS---SEGLEAEDWA 477
Score = 35.4 bits (80), Expect = 0.23
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 29/118 (24%)
Query: 26 ENNGERGEGERGAGGRGRRHSRPHYCSA-----GEEEEEEEEEDEIQEVQIT-------- 72
E E GE E GG G +EEEEE+EE + ++
Sbjct: 423 EEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVE 482
Query: 73 --------GDEEEEE-------DGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEEL 115
G +EE + +GG + D EEE++EE D DE + ++ G+E+
Sbjct: 483 AGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEED-DEDEDDDDDEEDGDEV 539
>gi|142356950 potassium channel tetramerisation domain containing 14
[Homo sapiens]
Length = 255
Score = 61.2 bits (147), Expect = 4e-09
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 14/132 (10%)
Query: 609 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 668
+ RP+ + +PL P P + T S V ++VGG +T++L TL K+P S++ +F
Sbjct: 7 VERPVGRMTSQTPLPQS--PRPRRPTMSTV-VELNVGGEFHTTTLGTLRKFPGSKLAEMF 63
Query: 669 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKL---LIPDDFKDYTLLYEEAKYFQL 725
D+ + +FIDR FR IL++LRT ++ IP+ +Y EA+++++
Sbjct: 64 SSLAKASTDA-EGRFFIDRPSTYFRPILDYLRTGQVPTQHIPE-------VYREAQFYEI 115
Query: 726 QPMLLEMERWKQ 737
+P++ +E Q
Sbjct: 116 KPLVKLLEDMPQ 127
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 59.7 bits (143), Expect = 1e-08
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 55 EEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDE-PLEPEDSAGE 113
EEEEEEEEE+E +E + EEEEED EE+EEEEEE E + +E LE E+ +
Sbjct: 891 EEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEED 950
Query: 114 ELEPEPVHMI----------NMDQSAALEPEAPPRLLAPRARGGPPGDGSELDPD 158
E E E + + +++ A P PP L P + PP E +P+
Sbjct: 951 EEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPES---PPKVQPEPEPE 1002
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 63 EDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPE 118
E+++ + I +EEEE+ EE+EEEEEEEE D++E E E+ EE E E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEE---DFEEEEEDEEEYFEEEEEE 927
Score = 42.0 bits (97), Expect = 0.002
Identities = 34/88 (38%), Positives = 40/88 (45%), Gaps = 18/88 (20%)
Query: 33 EGERGAGGRGRRHSRPHYCSAGEEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEE 92
EG G GG + +EEEEEE+E EEEE EE+EEEE
Sbjct: 863 EGTPGGGGPPALEEDLTVININSSDEEEEEEEE----------EEEE------EEEEEEE 906
Query: 93 EE--EEMGLDWDEPLEPEDSAGEELEPE 118
EE EE D +E E E+ EE E E
Sbjct: 907 EEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Score = 40.4 bits (93), Expect = 0.007
Identities = 56/172 (32%), Positives = 63/172 (36%), Gaps = 49/172 (28%)
Query: 55 EEEEEEEEEDEIQEVQ-----ITGDEEEE-------------------------EDGGGG 84
EEEE+EEEE+E++EV+ G E EE E G
Sbjct: 946 EEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGL 1005
Query: 85 LEEDEEEEEEEEMGLDWDEPLEPE--DSAGE-ELEPE-PVHMINMDQSAALEPEAPPRLL 140
L E EE EEE G D L PE S GE E E E P + EP APP LL
Sbjct: 1006 LLEVEEPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLL 1065
Query: 141 APRARGGPPGDGSELDPDVLQRPERARLSENTRLATRYAVRIFREYLSEKAQ 192
DGS D +Q P E T E L EK Q
Sbjct: 1066 EEETE-----DGS----DKVQPPPETPAEEEMETETE------AEALQEKEQ 1102
>gi|51036594 potassium channel tetramerisation domain containing 11
[Homo sapiens]
Length = 232
Score = 57.8 bits (138), Expect = 4e-08
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 682 HYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
HYFIDRDG+ FR+ILNFLR +L +P + + LL EA ++Q++P+L
Sbjct: 23 HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLL 70
>gi|13994353 potassium channel tetramerisation domain containing 10
[Homo sapiens]
Length = 313
Score = 57.0 bits (136), Expect = 7e-08
Identities = 34/106 (32%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Query: 636 SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYI 695
S+ V ++VGG +Y +++ TLTK ++ + +F G ++ DS + IDR G+ F I
Sbjct: 30 SSKYVKLNVGGALYYTTMQTLTKQ-DTMLKAMFSGRMEVLTDS-EGWILIDRCGKHFGTI 87
Query: 696 LNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRET 741
LN+LR + +P+ ++ L EAKY+ +Q ++ E + Q+++T
Sbjct: 88 LNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQNKDT 133
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 55.5 bits (132), Expect = 2e-07
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 11 NTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEEEEEDEIQEVQ 70
+TSA G G G G RR E EEEEEEED + E
Sbjct: 86 STSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSE-- 143
Query: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEE 114
EEEEEDG +D E++EE+EM D D+ PE+ ++
Sbjct: 144 ----EEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 55.5 bits (132), Expect = 2e-07
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 11 NTSAGGSASAAAAAAENNGERGEGERGAGGRGRRHSRPHYCSAGEEEEEEEEEDEIQEVQ 70
+TSA G G G G RR E EEEEEEED + E
Sbjct: 86 STSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSE-- 143
Query: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEE 114
EEEEEDG +D E++EE+EM D D+ PE+ ++
Sbjct: 144 ----EEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDD 183
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 55.1 bits (131), Expect = 3e-07
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 49 HYCSAGEEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPE 108
HY GEEE E EEEDE E+Q G EEEEE+ EE+EEEEEEEE + P+
Sbjct: 102 HYPLVGEEETEREEEDE--EIQEEGGEEEEEE-----EEEEEEEEEEEEEEEEQPRAGPQ 154
Query: 109 DSAGEELEPEPVHMINMDQSAALEPEAPPR 138
S G + +++ + E A PR
Sbjct: 155 GSGGNHEQYSLEEDQALEEWVSSETSALPR 184
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 55.1 bits (131), Expect = 3e-07
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 54 GEEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGE 113
G+EEEEEEEEDE +E + +EEEEE+ EE+EEEEEE + E L P +
Sbjct: 731 GKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSS 790
Query: 114 ELEPEPVHMINMDQSAALEPEAPPRLLA---PRARGGPPGDGSELDP------------- 157
E + D+S + AP LLA +RG +L+P
Sbjct: 791 EGSER-----STDRS---QEGAPSTLLADDQKESRGRASMADGDLEPEEGSKTLVLVSPG 842
Query: 158 DVLQRPERARLSENTRLATRYAVRIFREYLSEKAQSPDFETMDKGALCRVLRS 210
D+ + P A L+ + L T A + ++ + + + G L VL+S
Sbjct: 843 DMKKSPVTAELAPDPDLGTLAA--LTPQHERPQPTGSQLDVSEPGTLSSVLKS 893
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 54.7 bits (130), Expect = 4e-07
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 54 GEEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGE 113
GE+E++ E ED +E ++ +E+E+ED G ++DE EEEEE GLD DE E ED E
Sbjct: 194 GEDEKDXENEDG-EEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEE 252
Query: 114 ELE 116
E E
Sbjct: 253 EEE 255
Score = 45.4 bits (106), Expect = 2e-04
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Query: 54 GEEEEEEEEEDEIQEVQITGDEEE--EEDGGGGLEEDE------EEEEEEEMGLDWDEPL 105
GEEEE +EEEDE ++V+ D++E EE+ GL++DE E+EEEEE G +
Sbjct: 205 GEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKR 264
Query: 106 EPED 109
E +D
Sbjct: 265 ETDD 268
Score = 41.2 bits (95), Expect = 0.004
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 58 EEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGL----DWDEPLEPEDSAGE 113
+ E++E + Q+ G ++EEED G E+D E E+ EE L D DE +E +D E
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
Query: 114 ELEPEPVHMINMDQSAALEPE 134
E E ++ D+ E E
Sbjct: 229 VSEEEEEFGLDKDEDDEDEDE 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,807,275
Number of Sequences: 37866
Number of extensions: 2189586
Number of successful extensions: 34748
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 614
Number of HSP's that attempted gapping in prelim test: 14854
Number of HSP's gapped (non-prelim): 8357
length of query: 865
length of database: 18,247,518
effective HSP length: 111
effective length of query: 754
effective length of database: 14,044,392
effective search space: 10589471568
effective search space used: 10589471568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.