Guide to the Human Genome
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Search of human proteins with 218505680

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|218505680 exoribonuclease 2 isoform 1 [Homo sapiens]
         (691 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|218505680 exoribonuclease 2 isoform 1 [Homo sapiens]              1406   0.0  
gi|218505674 exoribonuclease 2 isoform 2 [Homo sapiens]               502   e-142
gi|31543184 three prime histone mRNA exonuclease 1 [Homo sapiens]     139   1e-32
gi|74136559 prion protein interacting protein [Homo sapiens]          124   4e-28
gi|157388969 nei endonuclease VIII-like 3 [Homo sapiens]               46   1e-04
gi|110347443 TATA element modulatory factor 1 [Homo sapiens]           40   0.006
gi|10835218 topoisomerase (DNA) III alpha [Homo sapiens]               39   0.021
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]     34   0.40 
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]      34   0.40 
gi|33383237 minichromosome maintenance complex component 10 isof...    33   0.68 
gi|33383235 minichromosome maintenance complex component 10 isof...    33   0.88 
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       33   1.2  
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       33   1.2  
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ...    33   1.2  
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    33   1.2  
gi|18375507 apurinic/apyrimidinic endonuclease 2 [Homo sapiens]        33   1.2  
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     33   1.2  
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     33   1.2  
gi|120953251 neuron navigator 3 [Homo sapiens]                         32   1.5  
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    32   2.0  
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    32   2.0  
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    32   2.0  
gi|46195763 metastasis suppressor 1-like [Homo sapiens]                32   2.6  
gi|30520335 WD repeat domain 49 [Homo sapiens]                         32   2.6  
gi|151301228 formin binding protein 3 [Homo sapiens]                   31   3.4  
gi|13540590 family with sequence similarity 117, member A [Homo ...    31   4.4  
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m...    30   5.7  
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m...    30   5.7  
gi|66933005 calnexin precursor [Homo sapiens]                          30   5.7  
gi|10716563 calnexin precursor [Homo sapiens]                          30   5.7  

>gi|218505680 exoribonuclease 2 isoform 1 [Homo sapiens]
          Length = 691

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 691/691 (100%), Positives = 691/691 (100%)

Query: 1   MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE 60
           MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE
Sbjct: 1   MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE 60

Query: 61  FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW 120
           FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW
Sbjct: 61  FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW 120

Query: 121 IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI 180
           IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI
Sbjct: 121 IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI 180

Query: 181 DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR 240
           DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR
Sbjct: 181 DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR 240

Query: 241 SLNKVPTKKNFSILARNLNTIQVEEMSACNISIQGPSIYNKEPKNIINPHEKVQMKSICA 300
           SLNKVPTKKNFSILARNLNTIQVEEMSACNISIQGPSIYNKEPKNIINPHEKVQMKSICA
Sbjct: 241 SLNKVPTKKNFSILARNLNTIQVEEMSACNISIQGPSIYNKEPKNIINPHEKVQMKSICA 300

Query: 301 NSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTSVGQLQSPTLNSPIYMQKQGKNE 360
           NSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTSVGQLQSPTLNSPIYMQKQGKNE
Sbjct: 301 NSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTSVGQLQSPTLNSPIYMQKQGKNE 360

Query: 361 HLAFNTKSKASTVGSELVLVSTTVPTVHHVSDLEMSSTLDCLPVLADWEDVVLLPASQPE 420
           HLAFNTKSKASTVGSELVLVSTTVPTVHHVSDLEMSSTLDCLPVLADWEDVVLLPASQPE
Sbjct: 361 HLAFNTKSKASTVGSELVLVSTTVPTVHHVSDLEMSSTLDCLPVLADWEDVVLLPASQPE 420

Query: 421 ENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKSIVYKSPH 480
           ENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKSIVYKSPH
Sbjct: 421 ENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKSIVYKSPH 480

Query: 481 TTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNPCSPQ 540
           TTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNPCSPQ
Sbjct: 481 TTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNPCSPQ 540

Query: 541 AFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCG 600
           AFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCG
Sbjct: 541 AFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCG 600

Query: 601 RRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKWEQTLQKERANSMVPSHSTGGL 660
           RRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKWEQTLQKERANSMVPSHSTGGL
Sbjct: 601 RRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKWEQTLQKERANSMVPSHSTGGL 660

Query: 661 TFSSPETSHICDRNLSISTKNSLRLRPSMRN 691
           TFSSPETSHICDRNLSISTKNSLRLRPSMRN
Sbjct: 661 TFSSPETSHICDRNLSISTKNSLRLRPSMRN 691


>gi|218505674 exoribonuclease 2 isoform 2 [Homo sapiens]
          Length = 328

 Score =  502 bits (1292), Expect = e-142
 Identities = 245/246 (99%), Positives = 245/246 (99%)

Query: 1   MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE 60
           MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE
Sbjct: 1   MATKRLARQLGLIRRKSIAPANGNLGRSKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIE 60

Query: 61  FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW 120
           FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW
Sbjct: 61  FPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKW 120

Query: 121 IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI 180
           IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI
Sbjct: 121 IHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWI 180

Query: 181 DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR 240
           DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR
Sbjct: 181 DLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITR 240

Query: 241 SLNKVP 246
           SLNK P
Sbjct: 241 SLNKGP 246


>gi|31543184 three prime histone mRNA exonuclease 1 [Homo sapiens]
          Length = 349

 Score =  139 bits (349), Expect = 1e-32
 Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 17/212 (8%)

Query: 34  FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
           +DY+ +IDFE+TC          EIIEFP VLLNT T +I+  FQ YV+P+ +  LS+FC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186

Query: 94  MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWS 153
           + LTGI Q QVD        L +   W+ K+++               ++ K  + +T  
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWM-KLKE-------------LGTKYKY-SLLTDG 231

Query: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR--RKPKGLSGALQEVGIEFSGR 211
            WD+   L  +C+  +L  P F   WI++R +Y  FY+  R    L+  L+++G+++ GR
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGR 291

Query: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
            H GLDDS+N A +A +M++DGC ++I   ++
Sbjct: 292 PHCGLDDSKNIARIAVRMLQDGCELRINEKMH 323


>gi|74136559 prion protein interacting protein [Homo sapiens]
          Length = 337

 Score =  124 bits (310), Expect = 4e-28
 Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 17/209 (8%)

Query: 32  QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
           Q + Y +V+DFE+TC  D    H QEIIEFP + LN  T +I+S F  YVQP  HP L+ 
Sbjct: 141 QRYHYFLVLDFEATC--DKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTP 198

Query: 92  FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151
           FC ELTGI QA VD    L+  L +  +W+ K           G+ +P+   +    FVT
Sbjct: 199 FCTELTGIIQAMVDGQPSLQQVLERVDEWMAK----------EGLLDPNVKSI----FVT 244

Query: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPK-GLSGALQEVGIEFSG 210
             DWDL V L  +C+   L    +   WI+L+  Y       PK GL    + + ++  G
Sbjct: 245 CGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIG 304

Query: 211 REHSGLDDSRNTALLAWKMIRDGCVMKIT 239
           R HSG+DD +N A +   +   G + K T
Sbjct: 305 RPHSGIDDCKNIANIMKTLAYRGFIFKQT 333


>gi|157388969 nei endonuclease VIII-like 3 [Homo sapiens]
          Length = 605

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 595 PLCKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKWEQ 641
           P C  G+RS    V   GPN+GK F+ CP+GK     K C +F+W +
Sbjct: 552 PFCNHGKRSTMKTVLKIGPNNGKNFFVCPLGK----EKQCNFFQWAE 594



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 542 FPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLC-KCG 600
           F PA K+P T     P    C+P  S+S  +        +N+ +  ++     P C K  
Sbjct: 460 FSPAHKKPKTAQYSSPELKSCNPGYSNSELQ--------INMTDGPRTLNPDSPRCSKHN 511

Query: 601 RRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKW 639
           R     VV  +G N G+ FY CP+ +  +    CG+F+W
Sbjct: 512 RLCILRVVRKDGENKGRQFYACPLPREAQ----CGFFEW 546


>gi|110347443 TATA element modulatory factor 1 [Homo sapiens]
          Length = 1093

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 17/188 (9%)

Query: 291 EKVQMKSICANSPIKAQQDQLQVKNNIKASLHNVKSSLP-----LFNTKSSTSVGQLQSP 345
           + +Q   + +  P K+Q+ + +VK+++  SLH  +S  P          S    G+  + 
Sbjct: 107 QTIQKSPVVSKPPAKSQRPEEEVKSSLHESLHIGQSRTPETTESQVKDSSLCVSGETLAA 166

Query: 346 TLNSPIYMQKQGKNEHLAFNTKSKASTVGSELVLVSTTVPTVHHVSDLEMSSTLDCLPVL 405
             +SP   + +GK+E     T +K S +    V +  +   +   + +E  S      + 
Sbjct: 167 GTSSP---KTEGKHE----ETVNKESDMKVPTVSLKVSESVIDVKTTMESISNTSTQSLT 219

Query: 406 ADWEDVVLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEETP 465
           A+ +D+ L P  Q  E+     P   S    +F+SG       ++E+  HE+        
Sbjct: 220 AETKDIALEPKEQKHEDRQSNTP---SPPVSTFSSG--TSTTSDIEVLDHESVISESSAS 274

Query: 466 QKSETSKS 473
            + ET+ S
Sbjct: 275 SRQETTDS 282


>gi|10835218 topoisomerase (DNA) III alpha [Homo sapiens]
          Length = 1001

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 583 LQEPWKSGKMTPPLCKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKW 639
           L  P  +G+     C CG+ +  L V   GPN G+ F+ C       N   C +F W
Sbjct: 799 LPPPTAAGESNSVTCNCGQEAVLLTVRKEGPNRGRQFFKC-------NGGSCNFFLW 848



 Score = 35.8 bits (81), Expect = 0.14
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYFKW 639
           C C + S    V  +GPN G+ F+ C   + Q+    CG+F+W
Sbjct: 897 CLCSQPSVTRTVQKDGPNKGRQFHTCAKPREQQ----CGFFQW 935


>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
          Length = 2540

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 36/279 (12%)

Query: 283 PKNIINPHEKVQMKSICA-NSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTS--- 338
           PK +I+      ++ +   NS     Q   ++  N+  S H++ ++  L   K  +    
Sbjct: 506 PKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPNVSDSKHSIANAKFLETAKKDSDQSW 565

Query: 339 VGQLQSPTLNSPIYMQKQGKNEHLAFNTKSKASTVGSELVLVSTTVPTVHHVSD------ 392
           V  +    L           N+HL    +   S + S L  VS     +H  S       
Sbjct: 566 VSDVVKVDLTQSSVTNASSGNDHLNMEKEKYVSYI-SPLSAVSVMEDKLHKRSPPPETIK 624

Query: 393 LEMSSTLDCLPVLADWEDVVLLPA-SQPEENVDCTVPISDSDLEISFNSGERLMVLKELE 451
            ++++++D   + +     V+ P  +   ++V       +S       +GER +  K   
Sbjct: 625 SKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKATYVNSQA-----TGERRLANKIEH 679

Query: 452 MSSHENFGDIEETPQKSETSKS--IVYKSPHTTIYNVKEAKDP---GSD---------IS 497
             S  +F  I       ET+KS  I+ K+ H T+Y     +DP   GS+         +S
Sbjct: 680 ELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVY-----RDPALIGSETGANHISPFLS 734

Query: 498 AFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNP 536
               P H SS    +N    HP +     LL+G + + P
Sbjct: 735 QHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTP 773


>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
          Length = 2303

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 36/279 (12%)

Query: 283 PKNIINPHEKVQMKSICA-NSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTS--- 338
           PK +I+      ++ +   NS     Q   ++  N+  S H++ ++  L   K  +    
Sbjct: 287 PKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPNVSDSKHSIANAKFLETAKKDSDQSW 346

Query: 339 VGQLQSPTLNSPIYMQKQGKNEHLAFNTKSKASTVGSELVLVSTTVPTVHHVSD------ 392
           V  +    L           N+HL    +   S + S L  VS     +H  S       
Sbjct: 347 VSDVVKVDLTQSSVTNASSGNDHLNMEKEKYVSYI-SPLSAVSVMEDKLHKRSPPPETIK 405

Query: 393 LEMSSTLDCLPVLADWEDVVLLPA-SQPEENVDCTVPISDSDLEISFNSGERLMVLKELE 451
            ++++++D   + +     V+ P  +   ++V       +S       +GER +  K   
Sbjct: 406 SKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKATYVNSQA-----TGERRLANKIEH 460

Query: 452 MSSHENFGDIEETPQKSETSKS--IVYKSPHTTIYNVKEAKDP---GSD---------IS 497
             S  +F  I       ET+KS  I+ K+ H T+Y     +DP   GS+         +S
Sbjct: 461 ELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVY-----RDPALIGSETGANHISPFLS 515

Query: 498 AFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNP 536
               P H SS    +N    HP +     LL+G + + P
Sbjct: 516 QHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTP 554


>gi|33383237 minichromosome maintenance complex component 10 isoform
           1 [Homo sapiens]
          Length = 875

 Score = 33.5 bits (75), Expect = 0.68
 Identities = 57/215 (26%), Positives = 81/215 (37%), Gaps = 37/215 (17%)

Query: 405 LADWEDVVLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFG--DIE 462
           L D E+V   PASQ  EN     P    + + +    E L  L+E   +  E      I+
Sbjct: 84  LTDEEEV---PASQSTENRVLPAPAPRRE-KTNEELQEELRNLQEQMKALQEQLKVTTIK 139

Query: 463 ETPQKSETSKSIVYKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVL 522
           +T   +   KS V KSP                      P  K     R+  +      L
Sbjct: 140 QTASPARLQKSPVEKSPR---------------------PPLKERRVQRIQESTCFSAEL 178

Query: 523 GKHPLLSGGTKRNPCSPQAFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVN 582
               L    TKR   +P+A PP  K        + TS+   P+++ S R  PS +T    
Sbjct: 179 DVPALPR--TKRVARTPKASPPDPKSS----SSRMTSAPSQPLQTIS-RNKPSGITRGQI 231

Query: 583 LQEPWKSGKMTPPLCK---CGRRSKRLVVSNNGPN 614
           +  P  SG+ T P+C     G R +R  VS+   N
Sbjct: 232 VGTPGSSGETTQPICVEAFSGLRLRRPRVSSTEMN 266


>gi|33383235 minichromosome maintenance complex component 10 isoform
           2 [Homo sapiens]
          Length = 874

 Score = 33.1 bits (74), Expect = 0.88
 Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 34/213 (15%)

Query: 405 LADWEDVVLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEET 464
           L D E+V   PASQ  EN     P    + + +    E L  L+E   +  E    ++ T
Sbjct: 84  LTDEEEV---PASQSTENRVLPAPAPRRE-KTNEELQEELRNLQEQMKALQEQ---LKVT 136

Query: 465 PQKSETSKSIVYKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGK 524
             K   S + + KSP          K P   +   ++   + ST    +A +  P +   
Sbjct: 137 TIKQTASPARLQKSPE---------KSPRPPLKERRVQRIQESTC--FSAELDVPAL--- 182

Query: 525 HPLLSGGTKRNPCSPQAFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQ 584
                  TKR   +P+A PP  K        + TS+   P+++ S R  PS +T    + 
Sbjct: 183 -----PRTKRVARTPKASPPDPKSS----SSRMTSAPSQPLQTIS-RNKPSGITRGQIVG 232

Query: 585 EPWKSGKMTPPLCK---CGRRSKRLVVSNNGPN 614
            P  SG+ T P+C     G R +R  VS+   N
Sbjct: 233 TPGSSGETTQPICVEAFSGLRLRRPRVSSTEMN 265


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 26/112 (23%), Positives = 48/112 (42%)

Query: 500 KLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNPCSPQAFPPAKKQPFTIHEEKPTS 559
           K  E   +    ++A  S P  LG+ PL     +  P +PQ   PA + P       P  
Sbjct: 63  KAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPP 122

Query: 560 SDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCGRRSKRLVVSNN 611
           S  SP +++S    P+    +  L  P  + ++ P + +  + +K+   S++
Sbjct: 123 SSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSS 174


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 26/112 (23%), Positives = 48/112 (42%)

Query: 500 KLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRNPCSPQAFPPAKKQPFTIHEEKPTS 559
           K  E   +    ++A  S P  LG+ PL     +  P +PQ   PA + P       P  
Sbjct: 63  KAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPP 122

Query: 560 SDCSPVRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCGRRSKRLVVSNN 611
           S  SP +++S    P+    +  L  P  + ++ P + +  + +K+   S++
Sbjct: 123 SSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSS 174


>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
           sapiens]
          Length = 722

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 29/179 (16%)

Query: 412 VLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELE---MSSHENFGDIEETPQKS 468
           V+ P S  + + D +   SDSD     +  ER   L EL+    + HE    + +  Q  
Sbjct: 479 VVAPPSSSDSSSDSS---SDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNK 535

Query: 469 ETSKSIVYKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLL 528
              K    K      +  KE  +      A + P  K+   N  N+N+S           
Sbjct: 536 PKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVS----------- 584

Query: 529 SGGTKRNPCSPQAFPPA--------KKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTS 579
               K+ P   ++ PP         K +P +  E++  S D + +      R+  I+ S
Sbjct: 585 ----KKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQS 639


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 29/179 (16%)

Query: 412 VLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELE---MSSHENFGDIEETPQKS 468
           V+ P S  + + D +   SDSD     +  ER   L EL+    + HE    + +  Q  
Sbjct: 479 VVAPPSSSDSSSDSS---SDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNK 535

Query: 469 ETSKSIVYKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLL 528
              K    K      +  KE  +      A + P  K+   N  N+N+S           
Sbjct: 536 PKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVS----------- 584

Query: 529 SGGTKRNPCSPQAFPPA--------KKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILTS 579
               K+ P   ++ PP         K +P +  E++  S D + +      R+  I+ S
Sbjct: 585 ----KKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQS 639


>gi|18375507 apurinic/apyrimidinic endonuclease 2 [Homo sapiens]
          Length = 518

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 587 WKS---GKMTPPLCKCGRRSKRLV--VSNNGPNHGKVFYCC--PIGKYQENRKCCGYFKW 639
           WKS   G +  PLC  G R   ++  V   GPN G+ FY C  P G   +    C +F W
Sbjct: 456 WKSVLAGPLRTPLCG-GHREPCVMRTVKKPGPNLGRRFYMCARPRGPPTDPSSRCNFFLW 514

Query: 640 EQ 641
            +
Sbjct: 515 SR 516


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 21/195 (10%)

Query: 437 SFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKS--IVYKSPHTTIYNVKEAKDPGS 494
           S + G R         SS     D +    ++++SK     YK P       K  ++  +
Sbjct: 252 SSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPP------KAYREDKT 305

Query: 495 DISAFKLPEHKSSTFNRVNANMSH----PLVLGKHPLLSGG-----TKRNPCSPQAFPPA 545
           +  A++     S    R ++ +SH     L   K P  +GG     ++R P SP  +   
Sbjct: 306 EPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPYSRR 365

Query: 546 KKQPFTIHEEKPTSSDCSP--VRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCGRRS 603
           +   ++ H       D SP    SSSWRR  S  +    L+   KS   +P   +  R  
Sbjct: 366 RSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPV--LRRSGKSRSRSPYSSRHSRSR 423

Query: 604 KRLVVSNNGPNHGKV 618
            R  +S +   H  +
Sbjct: 424 SRHRLSRSRSRHSSI 438


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 21/195 (10%)

Query: 437 SFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKS--IVYKSPHTTIYNVKEAKDPGS 494
           S + G R         SS     D +    ++++SK     YK P       K  ++  +
Sbjct: 252 SSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPP------KAYREDKT 305

Query: 495 DISAFKLPEHKSSTFNRVNANMSH----PLVLGKHPLLSGG-----TKRNPCSPQAFPPA 545
           +  A++     S    R ++ +SH     L   K P  +GG     ++R P SP  +   
Sbjct: 306 EPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPYSRR 365

Query: 546 KKQPFTIHEEKPTSSDCSP--VRSSSWRRLPSILTSTVNLQEPWKSGKMTPPLCKCGRRS 603
           +   ++ H       D SP    SSSWRR  S  +    L+   KS   +P   +  R  
Sbjct: 366 RSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPV--LRRSGKSRSRSPYSSRHSRSR 423

Query: 604 KRLVVSNNGPNHGKV 618
            R  +S +   H  +
Sbjct: 424 SRHRLSRSRSRHSSI 438


>gi|120953251 neuron navigator 3 [Homo sapiens]
          Length = 2363

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 23/182 (12%)

Query: 284 KNIINPHEKVQMK----SICANSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTSV 339
           K+++ P EK +       +C   P+K ++DQ+      K S   + S +P    K S + 
Sbjct: 460 KSLLQPKEKEEKNRDKNKVCTEKPVKEEKDQVTEMAPKKTS--KIASLIP----KGSKTT 513

Query: 340 GQLQSPTLNSPIYMQKQGKNEHLAFNTKSKASTVGSELVLVSTT----VPTVHHVSDLEM 395
              +   + S   + K G        T S  ST   E     TT      ++     +E 
Sbjct: 514 AAKKESLIPSSSGIPKPGSKVPTVKQTISPGSTASKESEKFRTTKGSPSQSLSKPITMEK 573

Query: 396 SSTLDCLPVLADWEDVVLLPASQPEENVDCTVPISDSDLEISFNSGERLMVLKELEMSSH 455
           +S   C   L   E      A Q   +  CT+ ++ S  +   ++G   + L + +  SH
Sbjct: 574 ASASSCPAPLEGRE------AGQASPSGSCTMTVAQSSGQ---STGNGAVQLPQQQQHSH 624

Query: 456 EN 457
            N
Sbjct: 625 PN 626


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
            sapiens]
          Length = 2191

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 491  DPGSDISAFKLPEHKSSTFNR-VNANMSHPLVLGKHPLLSGGTKRNPCSPQAFPPAKKQP 549
            DP SD+S    P+  S T N      MS P V+G+ P       ++P       P   +P
Sbjct: 1180 DPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPY---EPNKDPFGGMRKVPGSSEP 1236

Query: 550  FTIHEEKPTSS 560
            F    + P SS
Sbjct: 1237 FMTQGQMPNSS 1247


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 491  DPGSDISAFKLPEHKSSTFNR-VNANMSHPLVLGKHPLLSGGTKRNPCSPQAFPPAKKQP 549
            DP SD+S    P+  S T N      MS P V+G+ P       ++P       P   +P
Sbjct: 1220 DPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPY---EPNKDPFGGMRKVPGSSEP 1276

Query: 550  FTIHEEKPTSS 560
            F    + P SS
Sbjct: 1277 FMTQGQMPNSS 1287


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 491  DPGSDISAFKLPEHKSSTFNR-VNANMSHPLVLGKHPLLSGGTKRNPCSPQAFPPAKKQP 549
            DP SD+S    P+  S T N      MS P V+G+ P       ++P       P   +P
Sbjct: 1167 DPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPY---EPNKDPFGGMRKVPGSSEP 1223

Query: 550  FTIHEEKPTSS 560
            F    + P SS
Sbjct: 1224 FMTQGQMPNSS 1234


>gi|46195763 metastasis suppressor 1-like [Homo sapiens]
          Length = 747

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 67/313 (21%), Positives = 117/313 (37%), Gaps = 46/313 (14%)

Query: 318 KASLHNVKSSLPL---FNTKSSTSVGQLQSPTLNSPIYMQKQGKNEHLAFNTKSKASTVG 374
           +A ++++KSS P+   FN+K++    QL++  L +  ++    K   +A NT+     +G
Sbjct: 16  QAIVNDMKSSYPIWEDFNSKATKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGATRDIG 75

Query: 375 SELVLVSTTVPTVHHVSDLEMSSTLDCL--PV---LADWEDVVLLPASQPEENVDCTVPI 429
           S L  +     ++        ++ L+ L  P+   + DW+      A+Q ++  D     
Sbjct: 76  SALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKA----ANQLDK--DHAKEY 129

Query: 430 SDSDLEISFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKSIVYKSPHTTIYNVKEA 489
             +  EI   S + L + K+   +  E  G  +  PQ     + +        +Y + E 
Sbjct: 130 KRARHEIKKKSSDTLKLQKK---ARKELLGKGDLQPQLDSALQDV------NDMYLLLEE 180

Query: 490 KDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRN---------PCSPQ 540
            +  +   A      +  TF         P+V G+  +L   T               P 
Sbjct: 181 TEKQAVRRALIEERGRFCTF----ITFLQPVVNGELTMLGEITHLQGIIDDLVVLTAEPH 236

Query: 541 AFPPAKKQPFT---------IHEEKPTSSDCSPVRSSSWRRLPSILTSTVNLQEPWKSGK 591
             PPA +Q             ++  P+S   S  R SS    PS  +S      PW  G 
Sbjct: 237 KLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGA 296

Query: 592 MT-PPLCKCGRRS 603
            T  P   C  RS
Sbjct: 297 QTYSPSSTCRYRS 309


>gi|30520335 WD repeat domain 49 [Homo sapiens]
          Length = 697

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 18/125 (14%)

Query: 232 DGCVMKITRSLNKVPTK--KNFSILARNLNTIQVEEMSACNISIQGPSIYNKEPKNIINP 289
           + C+    R  N V ++  K  S+ ++  + +   E S  N   +  S YN  P   IN 
Sbjct: 523 ENCLFLPKRDTNLVESEIQKEISLFSKEESCLDPTEHSLLNKKNKDDSTYNVRPSEDINL 582

Query: 290 HEKVQMKSICANSPIKAQQDQLQVKNNIKASLHNVKSSLPLFNTKSSTSVGQLQS-PTLN 348
             K + +S C     K    ++  K+               F+T  S ++G L+  P +N
Sbjct: 583 DIKYKERSTCMKETQKPYYGEVIKKS---------------FSTFRSLNIGALEELPEVN 627

Query: 349 SPIYM 353
            P ++
Sbjct: 628 KPAFL 632


>gi|151301228 formin binding protein 3 [Homo sapiens]
          Length = 930

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 31/182 (17%)

Query: 318 KASLHNVKSSLPLFNTKSSTSVGQLQSPTLNSPIYMQKQGKNEHLAFNTKSKASTVGSEL 377
           K++LH +  +      +  T+      PT   P  M      E  A    + A+   +  
Sbjct: 206 KSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAA 265

Query: 378 VL-----------VSTTVPTVHHVSDLEMSSTLDCLPVLADWEDVVLLPASQPEENVDCT 426
                        VS TVP V       + +T+       D E+ V + +++ +  +  T
Sbjct: 266 AANANASTSASNTVSGTVPVVPEPEVTSIVATV------VDNENTVTI-STEEQAQLTST 318

Query: 427 VPISDSDLEISFNSGERLMVLKELEMSSHENFGDIEETPQKSETSKSIVYKSPHTTIYNV 486
             I D  +E+S N+GE        E S  E   D   TP+K E       K   T  +N 
Sbjct: 319 PAIQDQSVEVSSNTGE--------ETSKQETVADF--TPKKEEEESQPAKK---TYTWNT 365

Query: 487 KE 488
           KE
Sbjct: 366 KE 367


>gi|13540590 family with sequence similarity 117, member A [Homo
           sapiens]
          Length = 453

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 11/94 (11%)

Query: 487 KEAKDPGSDISAF-KLPEHKSSTFNRVNA-----NMSHPLVLGKHPLLSGGTKRNPCSPQ 540
           +EA  PG D++     P+     FN   +     N+  PL  G    +      NP SP 
Sbjct: 351 EEATSPGPDLAFLTSCPDKNKVHFNPTGSAFCPVNLMKPLFPGMG-FIFRNCPSNPGSP- 408

Query: 541 AFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLP 574
             PPA  +P     + P +S  SP+    W+R P
Sbjct: 409 -LPPASPRPPP--RKDPEASKASPLPFEPWQRTP 439


>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
           member 6-like protein 6 [Homo sapiens]
          Length = 655

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 617 KVFYCCPIGKYQENRKCCGYFKWEQTLQ-KERANSMVPSHSTGGLTFSSPETSHICDRNL 675
           K F    +  Y ENRK  G  +W++    +E  +S     S   +TF+ P+   I D  +
Sbjct: 62  KFFQLSEMEAYLENRKRRGTKRWDEDDDLEESEDSKQCKESLKRVTFTLPDDEAIEDAGV 121

Query: 676 SISTKNSLRLRPSMR 690
           S   KNS  ++ S +
Sbjct: 122 SHVKKNSDEVKSSFK 136


>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
           member 6-like protein 6 [Homo sapiens]
          Length = 655

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 617 KVFYCCPIGKYQENRKCCGYFKWEQTLQ-KERANSMVPSHSTGGLTFSSPETSHICDRNL 675
           K F    +  Y ENRK  G  +W++    +E  +S     S   +TF+ P+   I D  +
Sbjct: 62  KFFQLSEMEAYLENRKRRGTKRWDEDDDLEESEDSKQCKESLKRVTFTLPDDEAIEDAGV 121

Query: 676 SISTKNSLRLRPSMR 690
           S   KNS  ++ S +
Sbjct: 122 SHVKKNSDEVKSSFK 136


>gi|66933005 calnexin precursor [Homo sapiens]
          Length = 592

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 476 YKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRN 535
           +K+P T IY  K AK P +D+  +   + K+  +  +    +   +L    +++ G   N
Sbjct: 206 HKNPKTGIYEEKHAKRPDADLKTY-FTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN 264

Query: 536 PCSPQAFP------PAKKQPFTIHEEKPTSSDCSPVRSSSW 570
             +P   P      P  ++P    +E+P   D   V+   W
Sbjct: 265 DMTPPVNPSREIEDPEDRKP-EDWDERPKIPDPEAVKPDDW 304


>gi|10716563 calnexin precursor [Homo sapiens]
          Length = 592

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 476 YKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNANMSHPLVLGKHPLLSGGTKRN 535
           +K+P T IY  K AK P +D+  +   + K+  +  +    +   +L    +++ G   N
Sbjct: 206 HKNPKTGIYEEKHAKRPDADLKTY-FTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN 264

Query: 536 PCSPQAFP------PAKKQPFTIHEEKPTSSDCSPVRSSSW 570
             +P   P      P  ++P    +E+P   D   V+   W
Sbjct: 265 DMTPPVNPSREIEDPEDRKP-EDWDERPKIPDPEAVKPDDW 304


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,291,648
Number of Sequences: 37866
Number of extensions: 1250450
Number of successful extensions: 3525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 3500
Number of HSP's gapped (non-prelim): 57
length of query: 691
length of database: 18,247,518
effective HSP length: 109
effective length of query: 582
effective length of database: 14,120,124
effective search space: 8217912168
effective search space used: 8217912168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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