Guide to the Human Genome
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Name: ERI2 Sequence: fasta or formatted (328aa) NCBI GI: 218505674
Description:

exoribonuclease 2 isoform 2

Referenced in:

RNases and RNA Stability

Other entries for this name:
alt prot [691aa] exoribonuclease 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         18           1
 C cysteine            3.4         11           1
 D aspartate           4.3         14           2
 E glutamate           5.5         18           1
 F phenylalanine       4.6         15           1
 G glycine             6.1         20           1
 H histidine           2.1          7           3
 I isoleucine          6.1         20           2
 K lysine              7.6         25           1
 L leucine            11.6         38           2
 M methionine          2.1          7           1
 N asparagine          4.3         14           1
 P proline             3.4         11           1
 Q glutamine           6.7         22           3
 R arginine            4.6         15           2
 S serine              7.6         25           1
 T threonine           5.5         18           2
 V valine              4.0         13           1
 W tryptophan          3.0         10           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exoribonuclease 2 isoform 2 
ERI2                  0.730   exoribonuclease 2 isoform 1 
ERI1                  0.178   three prime histone mRNA exonuclease 1 
ERI3                  0.152   prion protein interacting protein 
UGDH                  0.008   UDP-glucose dehydrogenase 
EFCAB6                0.008   CAP-binding protein complex interacting protein 1 is...
EFCAB6                0.008   CAP-binding protein complex interacting protein 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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