Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: UVRAG Sequence: fasta or formatted (699aa) NCBI GI: 21687212
Description:

UV radiation resistance associated

Referenced in:

Additional Membrane Functions
Additional Stress Response Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         45           3
 C cysteine            2.0         14           2
 D aspartate           4.0         28           2
 E glutamate           7.4         52           2
 F phenylalanine       3.6         25           2
 G glycine             6.7         47           2
 H histidine           3.0         21           2
 I isoleucine          5.0         35           2
 K lysine              6.7         47           3
 L leucine            11.3         79           2
 M methionine          0.9          6           1
 N asparagine          4.9         34           1
 P proline             5.0         35           3
 Q glutamine           5.9         41           2
 R arginine            5.7         40           2
 S serine              8.4         59           3
 T threonine           4.1         29           2
 V valine              5.4         38           2
 W tryptophan          0.4          3           1
 Y tyrosine            3.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UV radiation resistance associated 
CROCC                 0.014   ciliary rootlet coiled-coil 
CCDC88A               0.011   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.011   coiled-coil domain containing 88A isoform 1 
CEP110                0.009   centrosomal protein 110kDa 
CCDC30                0.009   coiled-coil domain containing 30 
GON4L                 0.009   gon-4-like isoform a 
BECN1                 0.009   beclin 1 
GCC1                  0.009   Golgi coiled-coil protein 1 
PLCH2                 0.009   phospholipase C, eta 2 
CDC2L6                0.009   cell division cycle 2-like 6 (CDK8-like) 
SCLT1                 0.009   sodium channel associated protein 1 
C9orf93               0.009   hypothetical protein LOC203238 
CPNE3                 0.008   copine III 
ANKRD18B              0.008   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.008   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.008   PREDICTED: ankyrin repeat domain 18B 
PMFBP1                0.008   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.008   polyamine modulated factor 1 binding protein 1 isof...
CCDC88C               0.008   DVL-binding protein DAPLE 
DOC2B                 0.008   double C2-like domains, beta 
CDC42BPA              0.007   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.007   CDC42-binding protein kinase alpha isoform A 
GOLGA6D               0.007   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.007   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6                0.007   golgi autoantigen, golgin subfamily a, 6 
MYH3                  0.007   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CCDC40                0.007   coiled-coil domain containing 40 
DSP                   0.007   desmoplakin isoform I 
AKAP9                 0.007   A-kinase anchor protein 9 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press