Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF625 Sequence: fasta or formatted (306aa) NCBI GI: 21687161
Description:

zinc finger protein 625

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         14           1
 C cysteine            6.9         21           1
 D aspartate           2.3          7           2
 E glutamate           8.2         25           2
 F phenylalanine       3.3         10           1
 G glycine             9.2         28           2
 H histidine           8.5         26           2
 I isoleucine          2.9          9           1
 K lysine             11.4         35           3
 L leucine             4.2         13           2
 M methionine          1.3          4           1
 N asparagine          1.3          4           1
 P proline             4.2         13           1
 Q glutamine           2.9          9           1
 R arginine            5.9         18           2
 S serine              8.5         26           2
 T threonine           6.9         21           1
 V valine              2.3          7           1
 W tryptophan          0.3          1           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 625 
ZNF433                0.700   zinc finger protein 433 
ZNF20                 0.594   zinc finger protein 20 
ZNF844                0.584   zinc finger protein 844 
ZNF763                0.584   zinc finger protein 440 like 
ZNF491                0.578   zinc finger protein 491 
ZNF700                0.573   zinc finger protein 700 
ZNF439                0.553   zinc finger protein 439 
ZNF627                0.547   zinc finger protein 627 
ZNF440                0.541   zinc finger protein 440 
ZNF709                0.541   zinc finger protein 709 isoform b 
ZNF709                0.541   zinc finger protein 709 isoform a 
ZNF564                0.538   zinc finger protein 564 
LOC729747             0.532   similar to zinc finger protein 709 
LOC100290283          0.526   PREDICTED: hypothetical protein XP_002347961 
ZNF136                0.516   zinc finger protein 136 
ZNF14                 0.501   zinc finger protein 14 
ZNF823                0.499   ZFP-36 for a zinc finger protein 
ZNF791                0.499   zinc finger protein 791 
ZNF490                0.490   zinc finger protein 490 
ZNF443                0.484   zinc finger protein 443 
ZNF563                0.474   zinc finger protein 563 
ZNF799                0.474   zinc finger protein 799 
ZNF669                0.470   zinc finger protein 669 isoform 2 
ZNF669                0.470   zinc finger protein 669 isoform 1 
ZNF44                 0.470   zinc finger protein 44 
ZNF699                0.464   zinc finger protein 699 
ZNF442                0.459   zinc finger protein 442 
LOC100292533          0.453   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.453   PREDICTED: hypothetical protein XP_002347962 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press