Guide to the Human Genome
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Name: MTBP Sequence: fasta or formatted (904aa) NCBI GI: 21630257
Description:

Mdm2, transformed 3T3 cell double minute 2, p53 binding protein binding protein

Referenced in:

p53 Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         40           2
 C cysteine            2.3         21           1
 D aspartate           4.2         38           2
 E glutamate           8.5         77           3
 F phenylalanine       4.1         37           2
 G glycine             4.4         40           2
 H histidine           2.7         24           3
 I isoleucine          5.3         48           2
 K lysine              8.8         80           2
 L leucine            11.7        106           3
 M methionine          1.2         11           1
 N asparagine          4.0         36           3
 P proline             5.8         52           3
 Q glutamine           3.9         35           1
 R arginine            4.2         38           2
 S serine              9.8         89           3
 T threonine           5.8         52           2
 V valine              5.4         49           2
 W tryptophan          1.0          9           1
 Y tyrosine            2.4         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Mdm2, transformed 3T3 cell double minute 2, p53 bind... 
CCNT1                 0.005   cyclin T1 
NEDD1                 0.005   neural precursor cell expressed, developmentally do...
NEDD1                 0.005   neural precursor cell expressed, developmentally do...
NEDD1                 0.005   neural precursor cell expressed, developmentally dow...
NEDD1                 0.005   neural precursor cell expressed, developmentally do...
L1TD1                 0.005   LINE-1 type transposase domain containing 1 
MUC16                 0.004   mucin 16 
MYO9A                 0.004   myosin IXA 
DCTN1                 0.004   dynactin 1 isoform 4 
DCTN1                 0.004   dynactin 1 isoform 3 
DCTN1                 0.004   dynactin 1 isoform 2 
DCTN1                 0.004   dynactin 1 isoform 1 
BPTF                  0.004   bromodomain PHD finger transcription factor isoform ...
WAC                   0.004   WW domain-containing adapter with a coiled-coil regi...
WAC                   0.004   WW domain-containing adapter with a coiled-coil regi...
BBX                   0.004   HMG-BOX transcription factor BBX isoform 1 
BBX                   0.004   HMG-BOX transcription factor BBX isoform 2 
ARHGEF11              0.004   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
HCFC1                 0.004   host cell factor 1 
MUC6                  0.004   mucin 6, gastric 
CDKL5                 0.004   cyclin-dependent kinase-like 5 
CDKL5                 0.004   cyclin-dependent kinase-like 5 
CLIP1                 0.003   restin isoform b 
CLIP1                 0.003   restin isoform a 
NSD1                  0.003   nuclear receptor binding SET domain protein 1 isofor...
NSD1                  0.003   nuclear receptor binding SET domain protein 1 isofor...
FREM2                 0.003   FRAS1-related extracellular matrix protein 2 precurs...
KCNA4                 0.003   potassium voltage-gated channel, shaker-related subfa...
MPDZ                  0.003   multiple PDZ domain protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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