Guide to the Human Genome
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Name: CDKL5 Sequence: fasta or formatted (1030aa) NCBI GI: 4507281
Description:

cyclin-dependent kinase-like 5

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [1030aa] cyclin-dependent kinase-like 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         49           2
 C cysteine            1.2         12           2
 D aspartate           3.9         40           2
 E glutamate           6.2         64           2
 F phenylalanine       3.2         33           2
 G glycine             5.5         57           2
 H histidine           4.2         43           2
 I isoleucine          3.0         31           1
 K lysine              6.7         69           6
 L leucine             9.4         97           3
 M methionine          1.7         18           1
 N asparagine          5.1         53           3
 P proline             7.8         80           2
 Q glutamine           5.1         53           2
 R arginine            7.0         72           3
 S serine             12.6        130           3
 T threonine           5.4         56           3
 V valine              4.0         41           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.6         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase-like 5 
CDKL5                 1.000   cyclin-dependent kinase-like 5 
CDKL2                 0.135   cyclin-dependent kinase-like 2 
CDKL1                 0.128   cyclin-dependent kinase-like 1 
CDKL4                 0.123   cyclin-dependent kinase-like 4 
CDKL3                 0.114   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.114   cyclin-dependent kinase-like 3 isoform 2 
CDK5                  0.092   cyclin-dependent kinase 5 
CDC2                  0.088   cell division cycle 2 isoform 1 
CCRK                  0.088   cell cycle related kinase isoform 3 
CDK3                  0.088   cyclin-dependent kinase 3 
CDC2                  0.087   cell division cycle 2 isoform 3 
CDC2L2                0.086   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.086   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.086   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDK2                  0.085   cyclin-dependent kinase 2 isoform 1 
CDC2L5                0.084   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.084   cell division cycle 2-like 5 isoform 2 
ICK                   0.083   intestinal cell kinase 
ICK                   0.083   intestinal cell kinase 
CRKRS                 0.083   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.083   Cdc2-related kinase, arginine/serine-rich isoform 1...
MAK                   0.083   male germ cell-associated kinase 
CDK7                  0.082   cyclin-dependent kinase 7 
PCTK1                 0.077   PCTAIRE protein kinase 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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