Guide to the Human Genome
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Name: FXYD5 Sequence: fasta or formatted (178aa) NCBI GI: 21618361
Description:

FXYD domain-containing ion transport regulator 5

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt mRNA [178aa] FXYD domain-containing ion transport regulator 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          8           2
 C cysteine            2.2          4           1
 D aspartate           7.9         14           2
 E glutamate           3.9          7           1
 F phenylalanine       2.2          4           2
 G glycine             5.1          9           1
 H histidine           2.2          4           1
 I isoleucine          4.5          8           3
 K lysine              3.4          6           1
 L leucine            10.1         18           2
 M methionine          1.1          2           1
 N asparagine          0.6          1           1
 P proline            10.1         18           1
 Q glutamine           6.2         11           2
 R arginine            6.2         11           1
 S serine              8.4         15           4
 T threonine          15.7         28           3
 V valine              3.9          7           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FXYD domain-containing ion transport regulator 5 [Ho... 
FXYD5                 1.000   FXYD domain-containing ion transport regulator 5 [Ho...
MUC2                  0.059   mucin 2 precursor 
PRG4                  0.056   proteoglycan 4 isoform D 
PRG4                  0.056   proteoglycan 4 isoform C 
PRG4                  0.056   proteoglycan 4 isoform B 
PRG4                  0.056   proteoglycan 4 isoform A 
LOC100294420          0.056   PREDICTED: similar to mucin 2 
FXYD1                 0.056   phospholemman precursor 
FXYD1                 0.056   phospholemman precursor 
FXYD6                 0.050   FXYD domain-containing ion transport regulator 6 [Ho...
LOC100128934          0.047   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.047   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.047   PREDICTED: similar to FXYD domain-containing ion tr...
FXYD3                 0.047   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.047   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.047   FXYD domain containing ion transport regulator 3 isof...
FXYD4                 0.044   FXYD domain containing ion transport regulator 4 [Ho...
FNDC1                 0.044   fibronectin type III domain containing 1 
FXYD7                 0.044   FXYD domain-containing ion transport regulator 7 [Ho...
FXYD2                 0.044   FXYD domain-containing ion transport regulator 2 iso...
FXYD2                 0.044   FXYD domain-containing ion transport regulator 2 iso...
MAPK7                 0.041   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.041   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.041   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.041   mitogen-activated protein kinase 7 isoform 2 
ZAN                   0.038   zonadhesin isoform 3 
ZAN                   0.038   zonadhesin isoform 6 
MUC16                 0.038   mucin 16 
SIGLEC10              0.038   sialic acid binding Ig-like lectin 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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