Guide to the Human Genome
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Name: FXYD4 Sequence: fasta or formatted (89aa) NCBI GI: 27764904
Description:

FXYD domain containing ion transport regulator 4

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         11           2
 C cysteine            4.5          4           1
 D aspartate           4.5          4           2
 E glutamate           3.4          3           1
 F phenylalanine       2.2          2           1
 G glycine             7.9          7           2
 H histidine           1.1          1           1
 I isoleucine          5.6          5           1
 K lysine              7.9          7           1
 L leucine            15.7         14           4
 M methionine          1.1          1           1
 N asparagine          3.4          3           1
 P proline             6.7          6           1
 Q glutamine           3.4          3           1
 R arginine            1.1          1           1
 S serine              6.7          6           2
 T threonine           5.6          5           2
 V valine              3.4          3           1
 W tryptophan          1.1          1           1
 Y tyrosine            2.2          2           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FXYD domain containing ion transport regulator 4 [Ho... 
FXYD3                 0.408   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.408   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.408   FXYD domain containing ion transport regulator 3 isof...
FXYD3                 0.318   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.318   FXYD domain containing ion transport regulator 3 iso...
FXYD3                 0.255   FXYD domain containing ion transport regulator 3 is...
FXYD1                 0.210   phospholemman precursor 
FXYD1                 0.210   phospholemman precursor 
LOC100128934          0.166   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.166   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.166   PREDICTED: similar to FXYD domain-containing ion tr...
FXYD6                 0.166   FXYD domain-containing ion transport regulator 6 [Ho...
FXYD7                 0.108   FXYD domain-containing ion transport regulator 7 [Ho...
FXYD2                 0.102   FXYD domain-containing ion transport regulator 2 iso...
FXYD2                 0.102   FXYD domain-containing ion transport regulator 2 iso...
FXYD5                 0.096   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD5                 0.096   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD3                 0.051   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.051   FXYD domain containing ion transport regulator 3 is...
FAM124A               0.013   hypothetical protein LOC220108 
SEMA5B                0.013   semaphorin 5B isoform 1 
CCR5                  0.006   chemokine (C-C motif) receptor 5 
CCR5                  0.006   chemokine (C-C motif) receptor 5 
LOC100289242          0.006   PREDICTED: hypothetical protein XP_002342243 
RNF144A               0.006   ring finger protein 144 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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