Guide to the Human Genome
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Name: FXYD6 Sequence: fasta or formatted (95aa) NCBI GI: 11612655
Description:

FXYD domain-containing ion transport regulator 6

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         10           2
 C cysteine            3.2          3           1
 D aspartate           3.2          3           1
 E glutamate           9.5          9           2
 F phenylalanine       5.3          5           1
 G glycine             4.2          4           2
 H histidine           1.1          1           1
 I isoleucine          4.2          4           1
 K lysine              5.3          5           1
 L leucine            13.7         13           2
 M methionine          3.2          3           1
 N asparagine          4.2          4           1
 P proline             5.3          5           1
 Q glutamine           4.2          4           1
 R arginine            4.2          4           2
 S serine              5.3          5           1
 T threonine           3.2          3           1
 V valine              8.4          8           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FXYD domain-containing ion transport regulator 6 [Ho... 
LOC100128934          0.787   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.787   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.787   PREDICTED: similar to FXYD domain-containing ion tr...
FXYD1                 0.329   phospholemman precursor 
FXYD1                 0.329   phospholemman precursor 
FXYD2                 0.226   FXYD domain-containing ion transport regulator 2 iso...
FXYD2                 0.226   FXYD domain-containing ion transport regulator 2 iso...
FXYD3                 0.220   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.220   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.220   FXYD domain containing ion transport regulator 3 isof...
FXYD4                 0.159   FXYD domain containing ion transport regulator 4 [Ho...
FXYD7                 0.146   FXYD domain-containing ion transport regulator 7 [Ho...
FXYD3                 0.134   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.134   FXYD domain containing ion transport regulator 3 iso...
FXYD3                 0.128   FXYD domain containing ion transport regulator 3 is...
FXYD5                 0.104   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD5                 0.104   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD2                 0.073   FXYD domain-containing ion transport regulator 2 is...
ADAM7                 0.018   a disintegrin and metalloproteinase domain 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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