Guide to the Human Genome
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Name: FXYD1 Sequence: fasta or formatted (92aa) NCBI GI: 11612672
Description:

phospholemman precursor

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt mRNA [92aa] phospholemman precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          4           1
 C cysteine            3.3          3           1
 D aspartate           3.3          3           1
 E glutamate           6.5          6           3
 F phenylalanine       5.4          5           1
 G glycine             8.7          8           2
 H histidine           2.2          2           1
 I isoleucine          8.7          8           1
 K lysine              3.3          3           1
 L leucine            12.0         11           2
 M methionine          2.2          2           1
 N asparagine          1.1          1           1
 P proline             3.3          3           1
 Q glutamine           5.4          5           3
 R arginine           10.9         10           3
 S serine              7.6          7           2
 T threonine           5.4          5           1
 V valine              4.3          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholemman precursor 
FXYD1                 1.000   phospholemman precursor 
FXYD6                 0.335   FXYD domain-containing ion transport regulator 6 [Ho...
LOC100128934          0.286   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.286   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.286   PREDICTED: similar to FXYD domain-containing ion tr...
FXYD3                 0.242   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.242   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.242   FXYD domain containing ion transport regulator 3 isof...
FXYD2                 0.230   FXYD domain-containing ion transport regulator 2 iso...
FXYD2                 0.217   FXYD domain-containing ion transport regulator 2 iso...
FXYD4                 0.205   FXYD domain containing ion transport regulator 4 [Ho...
FXYD7                 0.193   FXYD domain-containing ion transport regulator 7 [Ho...
FXYD3                 0.155   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.155   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.155   FXYD domain containing ion transport regulator 3 iso...
FXYD5                 0.118   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD5                 0.118   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD2                 0.075   FXYD domain-containing ion transport regulator 2 is...
PTK7                  0.043   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.043   PTK7 protein tyrosine kinase 7 isoform d precursor [...
PTK7                  0.043   PTK7 protein tyrosine kinase 7 isoform c precursor [...
PTK7                  0.043   PTK7 protein tyrosine kinase 7 isoform b precursor [...
LRRC37A3              0.019   leucine rich repeat containing 37, member A3 
PCDH7                 0.019   protocadherin 7 isoform b precursor 
PCDH7                 0.019   protocadherin 7 isoform c precursor 
PCDH7                 0.019   protocadherin 7 isoform a precursor 
ITGA2                 0.012   integrin alpha 2 precursor 
LOC100294331          0.012   PREDICTED: similar to UDP glucuronosyltransferase 2...
LOC100294335          0.012   PREDICTED: similar to c114 SLIT-like testicular pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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