Guide to the Human Genome
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Name: FXYD3 Sequence: fasta or formatted (144aa) NCBI GI: 209862809
Description:

FXYD domain containing ion transport regulator 3 isoform 3

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [113aa] FXYD domain containing ion transport regulator 3 isoform 2 precursor
alt prot [96aa] FXYD domain containing ion transport regulator 3 isoform4 precursor
alt prot [61aa] FXYD domain containing ion transport regulator 3 isoform 5 precursor
alt prot [61aa] FXYD domain containing ion transport regulator 3 isoform 5 precursor
alt prot [87aa] FXYD domain containing ion transport regulator 3 isoform 1 precursor
alt prot [113aa] FXYD domain containing ion transport regulator 3 isoform 2 precursor
alt prot [87aa] FXYD domain containing ion transport regulator 3 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         14           4
 C cysteine            2.8          4           1
 D aspartate           4.2          6           1
 E glutamate           3.5          5           2
 F phenylalanine       3.5          5           1
 G glycine            13.2         19           2
 H histidine           2.8          4           2
 I isoleucine          3.5          5           3
 K lysine              4.2          6           1
 L leucine            11.8         17           2
 M methionine          2.8          4           1
 N asparagine          1.4          2           1
 P proline             7.6         11           2
 Q glutamine           5.6          8           1
 R arginine            4.2          6           1
 S serine              8.3         12           1
 T threonine           2.8          4           1
 V valine              4.9          7           1
 W tryptophan          0.7          1           1
 Y tyrosine            2.8          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FXYD domain containing ion transport regulator 3 is... 
FXYD3                 0.588   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.588   FXYD domain containing ion transport regulator 3 isof...
FXYD3                 0.537   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.537   FXYD domain containing ion transport regulator 3 iso...
FXYD3                 0.401   FXYD domain containing ion transport regulator 3 is...
FXYD4                 0.235   FXYD domain containing ion transport regulator 4 [Ho...
FXYD3                 0.162   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.162   FXYD domain containing ion transport regulator 3 is...
FXYD1                 0.143   phospholemman precursor 
FXYD1                 0.143   phospholemman precursor 
LOC100128934          0.140   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.140   PREDICTED: similar to FXYD domain-containing ion tr...
LOC100128934          0.140   PREDICTED: similar to FXYD domain-containing ion tr...
FXYD6                 0.132   FXYD domain-containing ion transport regulator 6 [Ho...
FXYD7                 0.070   FXYD domain-containing ion transport regulator 7 [Ho...
FXYD2                 0.059   FXYD domain-containing ion transport regulator 2 iso...
FXYD5                 0.059   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD5                 0.059   FXYD domain-containing ion transport regulator 5 [Ho...
FXYD2                 0.059   FXYD domain-containing ion transport regulator 2 iso...
CNTNAP1               0.026   contactin associated protein 1 precursor 
GLTSCR1               0.018   glioma tumor suppressor candidate region gene 1 [Ho...
PPAP2B                0.018   phosphatidic acid phosphatase type 2B 
PPAP2B                0.018   phosphatidic acid phosphatase type 2B 
IFT88                 0.018   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.018   intraflagellar transport 88 homolog isoform 2 
WASF3                 0.015   WAS protein family, member 3 
COL8A2                0.011   collagen, type VIII, alpha 2 
PRRT3                 0.011   proline-rich transmembrane protein 3 
OTX2                  0.007   orthodenticle homeobox 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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