Search of human proteins with 215820628

Search of human proteins with 215820628

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|215820628 FLYWCH family member 2 [Homo sapiens]
         (140 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|215820628 FLYWCH family member 2 [Homo sapiens]                    281   1e-76
gi|215820626 FLYWCH family member 2 [Homo sapiens]                    281   1e-76
gi|34147540 FLYWCH family member 2 [Homo sapiens]                     281   1e-76
gi|62953136 FLYWCH-type zinc finger 1 isoform b [Homo sapiens]        128   1e-30
gi|62953134 FLYWCH-type zinc finger 1 isoform a [Homo sapiens]        128   1e-30
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     35   0.015
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           35   0.015
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa...    35   0.020
gi|61966919 hypothetical protein LOC442444 [Homo sapiens]              35   0.020
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ...    33   0.058
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ...    33   0.058
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]            33   0.058
gi|21328446 hormone-sensitive lipase [Homo sapiens]                    33   0.076
gi|30795225 cell cycle exit and neuronal differentiation 1 [Homo...    33   0.076
gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]    33   0.076
gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]    33   0.076
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]    33   0.076
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]    33   0.076
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ...    33   0.100
gi|45387951 transmembrane protein 108 [Homo sapiens]                   33   0.100
gi|210147493 transmembrane protein 108 [Homo sapiens]                  33   0.100
gi|22749289 hypothetical protein LOC170062 [Homo sapiens]              33   0.100
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]            32   0.17 
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    32   0.22 
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ...    32   0.22 
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ...    32   0.22 
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    32   0.22 
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ...    32   0.22 
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          32   0.22 
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          32   0.22 

>gi|215820628 FLYWCH family member 2 [Homo sapiens]
          Length = 140

 Score =  281 bits (719), Expect = 1e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK
Sbjct: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120
           GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG
Sbjct: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120

Query: 121 PPEAAGENFAPCSVAPGKSL 140
           PPEAAGENFAPCSVAPGKSL
Sbjct: 121 PPEAAGENFAPCSVAPGKSL 140


>gi|215820626 FLYWCH family member 2 [Homo sapiens]
          Length = 140

 Score =  281 bits (719), Expect = 1e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK
Sbjct: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120
           GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG
Sbjct: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120

Query: 121 PPEAAGENFAPCSVAPGKSL 140
           PPEAAGENFAPCSVAPGKSL
Sbjct: 121 PPEAAGENFAPCSVAPGKSL 140


>gi|34147540 FLYWCH family member 2 [Homo sapiens]
          Length = 140

 Score =  281 bits (719), Expect = 1e-76
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK
Sbjct: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120
           GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG
Sbjct: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120

Query: 121 PPEAAGENFAPCSVAPGKSL 140
           PPEAAGENFAPCSVAPGKSL
Sbjct: 121 PPEAAGENFAPCSVAPGKSL 140


>gi|62953136 FLYWCH-type zinc finger 1 isoform b [Homo sapiens]
          Length = 703

 Score =  128 bits (322), Expect = 1e-30
 Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           MPLPEPSEQEGESVKA QEPSPKPGT+VIPAAPRKPR+FSKLVLLTAS       G+K +
Sbjct: 1   MPLPEPSEQEGESVKAGQEPSPKPGTDVIPAAPRKPREFSKLVLLTASDQDEDGVGSKPQ 60

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQ-RAIEAAPQEPEQKRSRQDPGTDRTE 113
            VHCV+SL + GPATLA  L     E Q   ++ A + PEQK S+ D      E
Sbjct: 61  EVHCVLSLEMAGPATLASTLQILPVEEQGGVVQPALEMPEQKCSKLDAAPQSLE 114


>gi|62953134 FLYWCH-type zinc finger 1 isoform a [Homo sapiens]
          Length = 715

 Score =  128 bits (322), Expect = 1e-30
 Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           MPLPEPSEQEGESVKA QEPSPKPGT+VIPAAPRKPR+FSKLVLLTAS       G+K +
Sbjct: 1   MPLPEPSEQEGESVKAGQEPSPKPGTDVIPAAPRKPREFSKLVLLTASDQDEDGVGSKPQ 60

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQ-RAIEAAPQEPEQKRSRQDPGTDRTE 113
            VHCV+SL + GPATLA  L     E Q   ++ A + PEQK S+ D      E
Sbjct: 61  EVHCVLSLEMAGPATLASTLQILPVEEQGGVVQPALEMPEQKCSKLDAAPQSLE 114


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 24/133 (18%)

Query: 3    LPEPSEQEGESVKASQEPSPKPGTEVIPAAP-----RKPRKFSKLVLLTASKDSTKVAGA 57
            +P P ++    V+  ++  PK  TEV    P     ++P K ++       K  TK   A
Sbjct: 903  VPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKA 962

Query: 58   KRKGVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGL 117
            K+             P T AKA      E  + +   P +P+ +++ +   TD+ +    
Sbjct: 963  KKP---------EEKPKTEAKA-----KEDDKTLSKEPSKPKAEKAEKSSSTDQKDSK-- 1006

Query: 118  AAGPPEAAGENFA 130
               PPE A E+ A
Sbjct: 1007 ---PPEKATEDKA 1016


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 85  PEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAGENFAPCSVAPGKSL 140
           P   RA    P EP+  RS   PG  R E +G AA P + AG   +  S +PG S+
Sbjct: 619 PGPARAPPGQPAEPDAPRSSPGPGA-REEGAGGAATPEDGAGGRGSEGSQSPGSSV 673



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 2  PLPEPSEQEGESVKASQEPSPKPGTEVIPAAP 33
          PLP P+   G      QEP P+P TE  P +P
Sbjct: 55 PLPPPTSPGGPKELEGQEPEPRP-TEEEPGSP 85


>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
           sapiens]
          Length = 2715

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKR 59
           EP +QEG + K S++  PKP  +  P  P++PRK  +       K+  +  GAK+
Sbjct: 100 EPGDQEG-AAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKK 153


>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
          Length = 1035

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           PEP E     ++   EP P+ G   +   P K R +S    L     +T V+    +   
Sbjct: 608 PEPPETRVSHLRP--EP-PETGVSHLRPEPPKTRMYS----LRPEPPNTGVSHLCPEPPK 660

Query: 64  CVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPE 123
             +S   P P     + L   P   R     P+ PE   SR  P   +T  S L A PPE
Sbjct: 661 TRVSSLPPEPPETGVSHLCPEPPETRVSHLRPEPPETGVSRLHPEPPKTRVSSLHAEPPE 720

Query: 124 AAGENFAP 131
           +   +  P
Sbjct: 721 SRVSHLCP 728



 Score = 27.3 bits (59), Expect = 4.2
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 15/112 (13%)

Query: 20  PSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPATLAKA 79
           P P P T V P  P  P+  + +  L      T+++  + +            P  +  +
Sbjct: 380 PEP-PKTRVPPLRPETPK--NGVSPLFPEPPKTRISNLRSE------------PPKIGVS 424

Query: 80  LLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAGENFAP 131
            L   P   R     P+ PE   S   P   +T  S L   PPE    +  P
Sbjct: 425 HLCLEPPKTRGSHLRPEPPETGVSHLRPEPPKTRVSSLHLEPPETGVSHLCP 476



 Score = 26.2 bits (56), Expect = 9.3
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 19/128 (14%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           PEP E++   ++    P P P T V    P  P+              T+V+  + +   
Sbjct: 476 PEPPEKDVSHLR----PEP-PDTGVSHLCPEPPK--------------TRVSHLRPEPSE 516

Query: 64  CVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPE 123
             +S   P P  +  + L   P         P+ PE   S   P   +T    L   PP+
Sbjct: 517 TGVSHLRPEPPKILVSSLHQAPPESSVSHLRPEPPETGVSHLRPEPPKTRMYSLRPEPPD 576

Query: 124 AAGENFAP 131
               +  P
Sbjct: 577 TGVSHLCP 584


>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 33.5 bits (75), Expect = 0.058
 Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 5   EPSEQEGESVKASQ-EPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           E  E E E+   S+ EP+P       PA+P   R+   L +L   +   ++AGA+R+   
Sbjct: 107 EEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVR--LELAGARRR--- 161

Query: 64  CVMSLG--VPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGP 121
             +S G  V  P  L   L        RA+   P   +  RS   PG      +  A+ P
Sbjct: 162 --LSEGKLVSRPRALLHGL-----RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPP 214

Query: 122 -PEAAG 126
            P  AG
Sbjct: 215 RPSTAG 220


>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
           (predicted) [Homo sapiens]
          Length = 290

 Score = 33.5 bits (75), Expect = 0.058
 Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 5   EPSEQEGESVKASQ-EPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           E  E E E+   S+ EP+P       PA+P   R+   L +L   +   ++AGA+R+   
Sbjct: 107 EEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVR--LELAGARRR--- 161

Query: 64  CVMSLG--VPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGP 121
             +S G  V  P  L   L        RA+   P   +  RS   PG      +  A+ P
Sbjct: 162 --LSEGKLVSRPRALLHGL-----RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPP 214

Query: 122 -PEAAG 126
            P  AG
Sbjct: 215 RPSTAG 220


>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 33.5 bits (75), Expect = 0.058
 Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 5   EPSEQEGESVKASQ-EPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           E  E E E+   S+ EP+P       PA+P   R+   L +L   +   ++AGA+R+   
Sbjct: 107 EEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVR--LELAGARRR--- 161

Query: 64  CVMSLG--VPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGP 121
             +S G  V  P  L   L        RA+   P   +  RS   PG      +  A+ P
Sbjct: 162 --LSEGKLVSRPRALLHGL-----RGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPP 214

Query: 122 -PEAAG 126
            P  AG
Sbjct: 215 RPSTAG 220


>gi|21328446 hormone-sensitive lipase [Homo sapiens]
          Length = 1076

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           P P++QE ES  A+Q    KPG +  P+AP +    S+     + K +T V GAK K
Sbjct: 146 PPPAQQEAESTPAAQ---AKPGAKREPSAPTE--STSQETPEQSDKQTTPVQGAKSK 197


>gi|30795225 cell cycle exit and neuronal differentiation 1 [Homo
           sapiens]
          Length = 149

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 12/125 (9%)

Query: 21  SPKPGTEV--IPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPATLAK 78
           SPKP T+V  +    + P        LT  K S K A A+++      +   P   T AK
Sbjct: 10  SPKPDTKVPQVTTEAKVPPAADGKAPLT--KPSKKEAPAEKQQPPAAPTTA-PAKKTSAK 66

Query: 79  A---LLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEA---AGENFAPC 132
           A   LL  H   + A    P  P+     + PG    ED   + GP      + ENF P 
Sbjct: 67  ADPALLNNHSNLKPA-PTVPSSPDATPEPKGPGDGAEEDEAASGGPGGRGPWSCENFNPL 125

Query: 133 SVAPG 137
            VA G
Sbjct: 126 LVAGG 130


>gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]
          Length = 1031

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 15  KASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPA 74
           +A + P P P     PA+  +PRK S    L  SKD     G + K      S+ VP P 
Sbjct: 286 QAFEPPMPPPCQS--PASLSEPRKVSPEGGLAISKDFWGTVGYREKPQASESSMPVPCPP 343

Query: 75  TLAKALLQTHPEAQR--AIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAG---ENF 129
                 L + PE QR  ++E   +   Q   R++ G     +S +    PE +G   E  
Sbjct: 344 ------LDSLPELQRESSLEDPSRYKPQWECRENSGNLWAFESPVLDLNPELSGTSPECV 397

Query: 130 APCSVAPGKSL 140
            P S  P K +
Sbjct: 398 PPASETPWKGM 408


>gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]
          Length = 1006

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 15  KASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPA 74
           +A + P P P     PA+  +PRK S    L  SKD     G + K      S+ VP P 
Sbjct: 261 QAFEPPMPPPCQS--PASLSEPRKVSPEGGLAISKDFWGTVGYREKPQASESSMPVPCPP 318

Query: 75  TLAKALLQTHPEAQR--AIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAG---ENF 129
                 L + PE QR  ++E   +   Q   R++ G     +S +    PE +G   E  
Sbjct: 319 ------LDSLPELQRESSLEDPSRYKPQWECRENSGNLWAFESPVLDLNPELSGTSPECV 372

Query: 130 APCSVAPGKSL 140
            P S  P K +
Sbjct: 373 PPASETPWKGM 383


>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
          Length = 1044

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 15  KASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPA 74
           +A + P P P     PA+  +PRK S    L  SKD     G + K      S+ VP P 
Sbjct: 299 QAFEPPMPPPCQS--PASLSEPRKVSPEGGLAISKDFWGTVGYREKPQASESSMPVPCPP 356

Query: 75  TLAKALLQTHPEAQR--AIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAG---ENF 129
                 L + PE QR  ++E   +   Q   R++ G     +S +    PE +G   E  
Sbjct: 357 ------LDSLPELQRESSLEDPSRYKPQWECRENSGNLWAFESPVLDLNPELSGTSPECV 410

Query: 130 APCSVAPGKSL 140
            P S  P K +
Sbjct: 411 PPASETPWKGM 421


>gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]
          Length = 1079

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 15  KASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVMSLGVPGPA 74
           +A + P P P     PA+  +PRK S    L  SKD     G + K      S+ VP P 
Sbjct: 334 QAFEPPMPPPCQS--PASLSEPRKVSPEGGLAISKDFWGTVGYREKPQASESSMPVPCPP 391

Query: 75  TLAKALLQTHPEAQR--AIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAG---ENF 129
                 L + PE QR  ++E   +   Q   R++ G     +S +    PE +G   E  
Sbjct: 392 ------LDSLPELQRESSLEDPSRYKPQWECRENSGNLWAFESPVLDLNPELSGTSPECV 445

Query: 130 APCSVAPGKSL 140
            P S  P K +
Sbjct: 446 PPASETPWKGM 456


>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
           [Homo sapiens]
          Length = 510

 Score = 32.7 bits (73), Expect = 0.100
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 10/132 (7%)

Query: 9   QEGESVKASQEPSPKPGTEVIPAAPRKPRKFSK--LVLLTASKDSTKVAGAKRKGVHCVM 66
           +EG +V++  +   +P  E IP  P K RK  K  + ++    ++ +    + K      
Sbjct: 302 EEGVTVESQPQVKVEPLEEAIPLPPTKKRKKEKGQMAMMEPGTEAMEPVEPEMK------ 355

Query: 67  SLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPEAAG 126
            L  PG     +      P+AQ A+ AAP++  +K  +QD  T   E   +    P+   
Sbjct: 356 PLESPGGTMAPQQPEGAKPQAQAAL-AAPKKKTKKEKQQD-ATVEPETEVVGPELPDDLE 413

Query: 127 ENFAPCSVAPGK 138
              AP S    K
Sbjct: 414 PQAAPTSTKKKK 425



 Score = 31.6 bits (70), Expect = 0.22
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 1   MPLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRK 60
           M + EP  +  E V+   +P   PG  + P  P   +  ++  L    K + K    K++
Sbjct: 337 MAMMEPGTEAMEPVEPEMKPLESPGGTMAPQQPEGAKPQAQAALAAPKKKTKK---EKQQ 393

Query: 61  GVHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAG 120
                    V GP       L    E Q    AAP   ++K+ +++ G   TE   +   
Sbjct: 394 DATVEPETEVVGPE------LPDDLEPQ----AAPTSTKKKKKKKERGHTVTEP--IQPL 441

Query: 121 PPEAAGENFAPCSVAPGKS 139
            PE  GE        PG +
Sbjct: 442 EPELPGEGQPEARATPGST 460


>gi|45387951 transmembrane protein 108 [Homo sapiens]
          Length = 575

 Score = 32.7 bits (73), Expect = 0.100
 Identities = 39/161 (24%), Positives = 55/161 (34%), Gaps = 39/161 (24%)

Query: 16  ASQEPSPKPGTEVIPA---------APRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVM 66
           A QEPSP+   +V+P+         AP    + + +V+LT + D      A         
Sbjct: 28  AIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPR 87

Query: 67  SLGVP-----------------------GPATLAKALLQTHPEAQRAIEAAP----QEPE 99
           + G P                       GPA  A A   + PE +   +AAP     +P 
Sbjct: 88  AEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTKPP 147

Query: 100 QKRSRQDPGTDRTEDSGLAAGP---PEAAGENFAPCSVAPG 137
              SR      RT        P    + AG +  P   APG
Sbjct: 148 GATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPG 188



 Score = 26.6 bits (57), Expect = 7.1
 Identities = 36/135 (26%), Positives = 46/135 (34%), Gaps = 14/135 (10%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           PEPS     +       SP+P T      P           L  +KD   +  A + G  
Sbjct: 230 PEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGS 289

Query: 64  CVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQ--EPEQKRSRQD------PGTDR--TE 113
              S G    AT A       P+A       P   +P+   S  D      PGT R  + 
Sbjct: 290 TFTSQGGTPDATAASG-APVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSRPLST 348

Query: 114 DSGL---AAGPPEAA 125
            SG+   A GP  AA
Sbjct: 349 SSGVFTAATGPTPAA 363


>gi|210147493 transmembrane protein 108 [Homo sapiens]
          Length = 575

 Score = 32.7 bits (73), Expect = 0.100
 Identities = 39/161 (24%), Positives = 55/161 (34%), Gaps = 39/161 (24%)

Query: 16  ASQEPSPKPGTEVIPA---------APRKPRKFSKLVLLTASKDSTKVAGAKRKGVHCVM 66
           A QEPSP+   +V+P+         AP    + + +V+LT + D      A         
Sbjct: 28  AIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPR 87

Query: 67  SLGVP-----------------------GPATLAKALLQTHPEAQRAIEAAP----QEPE 99
           + G P                       GPA  A A   + PE +   +AAP     +P 
Sbjct: 88  AEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTKPP 147

Query: 100 QKRSRQDPGTDRTEDSGLAAGP---PEAAGENFAPCSVAPG 137
              SR      RT        P    + AG +  P   APG
Sbjct: 148 GATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPG 188



 Score = 26.6 bits (57), Expect = 7.1
 Identities = 36/135 (26%), Positives = 46/135 (34%), Gaps = 14/135 (10%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           PEPS     +       SP+P T      P           L  +KD   +  A + G  
Sbjct: 230 PEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGS 289

Query: 64  CVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQ--EPEQKRSRQD------PGTDR--TE 113
              S G    AT A       P+A       P   +P+   S  D      PGT R  + 
Sbjct: 290 TFTSQGGTPDATAASG-APVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSRPLST 348

Query: 114 DSGL---AAGPPEAA 125
            SG+   A GP  AA
Sbjct: 349 SSGVFTAATGPTPAA 363


>gi|22749289 hypothetical protein LOC170062 [Homo sapiens]
          Length = 645

 Score = 32.7 bits (73), Expect = 0.100
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 4   PEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKGVH 63
           PEP +    S++    P P P T V    P  P   ++   L      T V+    +   
Sbjct: 213 PEPPKTRAPSLR----PEP-PKTRVSSLHPEPPE--TRASHLRVDPPETGVSHLCPEPPK 265

Query: 64  CVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPPE 123
            ++S   P P     + L   P   R     P+ PE   S   P   +T+ S L   PPE
Sbjct: 266 TLVSSVHPEPPDTGASHLCPEPPETRVSHLHPESPETGVSHLRPEPSKTQVSSLCPEPPE 325

Query: 124 A 124
           A
Sbjct: 326 A 326


>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
          Length = 786

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 3   LPEPS---EQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKR 59
           LPEP    E  G+ +  ++  SP+     I     K  + +K +L    K  T V+   +
Sbjct: 466 LPEPLMTYELHGDFIVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSNHSK 525

Query: 60  KGVHCVMSLGVPGPATLAKALLQTHP-----EAQRAIEAAPQEPEQKRSRQDPGTDRTED 114
           + +  V +LGV    TL +   +T       + Q  +     E  +K  R  P T   E 
Sbjct: 526 QNLMTVANLGVVFGPTLMRPQEETVAALMDLKFQNIVVEILIENHEKIFRTPPDTTFPEP 585

Query: 115 SGLAAGPPEA 124
           + L+A PP A
Sbjct: 586 TCLSASPPNA 595


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIP--AAPRKPRKFSKLVLLTASKDSTKVAGAKRKGV 62
           E  E+EGE+ +A +  S K G E++P  + P        L    A++ +  V   +RK  
Sbjct: 460 EEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIK 519

Query: 63  HCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPP 122
                  V     L  A  + +P       A P+   Q  +  +PG + +E SG+   P 
Sbjct: 520 ELNKKEAV---GDLLDAFKEANP-------AVPEVENQPPAGSNPGPE-SEGSGVPPRPE 568

Query: 123 EA 124
           EA
Sbjct: 569 EA 570


>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
           isoform 2 [Homo sapiens]
          Length = 1512

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIP--AAPRKPRKFSKLVLLTASKDSTKVAGAKRKGV 62
           E  E+EGE+ +A +  S K G E++P  + P        L    A++ +  V   +RK  
Sbjct: 373 EEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIK 432

Query: 63  HCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPP 122
                  V     L  A  + +P       A P+   Q  +  +PG + +E SG+   P 
Sbjct: 433 ELNKKEAV---GDLLDAFKEANP-------AVPEVENQPPAGSNPGPE-SEGSGVPPRPE 481

Query: 123 EA 124
           EA
Sbjct: 482 EA 483


>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
           isoform 3 [Homo sapiens]
          Length = 1435

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIP--AAPRKPRKFSKLVLLTASKDSTKVAGAKRKGV 62
           E  E+EGE+ +A +  S K G E++P  + P        L    A++ +  V   +RK  
Sbjct: 296 EEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIK 355

Query: 63  HCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPP 122
                  V     L  A  + +P       A P+   Q  +  +PG + +E SG+   P 
Sbjct: 356 ELNKKEAV---GDLLDAFKEANP-------AVPEVENQPPAGSNPGPE-SEGSGVPPRPE 404

Query: 123 EA 124
           EA
Sbjct: 405 EA 406


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIP--AAPRKPRKFSKLVLLTASKDSTKVAGAKRKGV 62
           E  E+EGE+ +A +  S K G E++P  + P        L    A++ +  V   +RK  
Sbjct: 460 EEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIK 519

Query: 63  HCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPP 122
                  V     L  A  + +P       A P+   Q  +  +PG + +E SG+   P 
Sbjct: 520 ELNKKEAV---GDLLDAFKEANP-------AVPEVENQPPAGSNPGPE-SEGSGVPPRPE 568

Query: 123 EA 124
           EA
Sbjct: 569 EA 570


>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
           isoform 4 [Homo sapiens]
          Length = 1403

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 5   EPSEQEGESVKASQEPSPKPGTEVIP--AAPRKPRKFSKLVLLTASKDSTKVAGAKRKGV 62
           E  E+EGE+ +A +  S K G E++P  + P        L    A++ +  V   +RK  
Sbjct: 264 EEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAVSVPKRRRKIK 323

Query: 63  HCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQEPEQKRSRQDPGTDRTEDSGLAAGPP 122
                  V     L  A  + +P       A P+   Q  +  +PG + +E SG+   P 
Sbjct: 324 ELNKKEAV---GDLLDAFKEANP-------AVPEVENQPPAGSNPGPE-SEGSGVPPRPE 372

Query: 123 EA 124
           EA
Sbjct: 373 EA 374


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 11/95 (11%)

Query: 2   PLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKG 61
           P+P    Q+  ++   + PSP P     P  P +P        LT S          +  
Sbjct: 240 PVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQP--------LTGSAGQPSAPSHAQPP 291

Query: 62  VHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQ 96
           +H     G PGP +L    L  HP   +     PQ
Sbjct: 292 LH---GQGPPGPHSLQAGPLLQHPGPPQPFGLPPQ 323


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 11/95 (11%)

Query: 2   PLPEPSEQEGESVKASQEPSPKPGTEVIPAAPRKPRKFSKLVLLTASKDSTKVAGAKRKG 61
           P+P    Q+  ++   + PSP P     P  P +P        LT S          +  
Sbjct: 794 PVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQP--------LTGSAGQPSAPSHAQPP 845

Query: 62  VHCVMSLGVPGPATLAKALLQTHPEAQRAIEAAPQ 96
           +H     G PGP +L    L  HP   +     PQ
Sbjct: 846 LH---GQGPPGPHSLQAGPLLQHPGPPQPFGLPPQ 877


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.125    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,313,086
Number of Sequences: 37866
Number of extensions: 380770
Number of successful extensions: 1986
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 1760
Number of HSP's gapped (non-prelim): 360
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.