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Search of human proteins with 215599562
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215599562 hypothetical protein LOC89927 isoform 2 [Homo
sapiens]
(187 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215599562 hypothetical protein LOC89927 isoform 2 [Homo sapiens] 369 e-102
gi|24308354 hypothetical protein LOC89927 isoform 1 [Homo sapiens] 329 7e-91
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 65 3e-11
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 59 2e-09
gi|209862789 microtubule associated monoxygenase, calponin and L... 57 9e-09
gi|150378549 tangerin [Homo sapiens] 56 2e-08
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens] 54 6e-08
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens] 54 6e-08
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 54 6e-08
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 54 6e-08
gi|118918413 MICAL C-terminal like [Homo sapiens] 54 1e-07
gi|205360947 microtubule associated monoxygenase, calponin and L... 45 5e-05
gi|226530313 microtubule associated monoxygenase, calponin and L... 45 5e-05
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 41 7e-04
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 39 0.002
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 39 0.002
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 39 0.002
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 39 0.003
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 39 0.003
gi|9910266 kinesin family member 15 [Homo sapiens] 39 0.003
gi|150010604 kinesin family member 4B [Homo sapiens] 38 0.004
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub... 38 0.004
gi|18390344 ATR interacting protein isoform 2 [Homo sapiens] 38 0.004
gi|18390347 ATR interacting protein isoform 1 [Homo sapiens] 38 0.004
gi|154937324 hypothetical protein LOC440295 [Homo sapiens] 38 0.004
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap... 38 0.006
gi|187761324 shootin1 isoform a [Homo sapiens] 38 0.006
gi|50511340 shootin1 isoform b [Homo sapiens] 38 0.006
gi|21735548 centrosomal protein 2 [Homo sapiens] 37 0.008
gi|148746195 trichohyalin [Homo sapiens] 37 0.008
>gi|215599562 hypothetical protein LOC89927 isoform 2 [Homo sapiens]
Length = 187
Score = 369 bits (946), Expect = e-102
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MWGDLTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFM 60
MWGDLTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFM
Sbjct: 1 MWGDLTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFM 60
Query: 61 MDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVE 120
MDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVE
Sbjct: 61 MDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVE 120
Query: 121 RLREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCG 180
RLREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCG
Sbjct: 121 RLREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCG 180
Query: 181 ATQCNIM 187
ATQCNIM
Sbjct: 181 ATQCNIM 187
>gi|24308354 hypothetical protein LOC89927 isoform 1 [Homo sapiens]
Length = 204
Score = 329 bits (844), Expect = 7e-91
Identities = 172/186 (92%), Positives = 176/186 (94%), Gaps = 1/186 (0%)
Query: 2 WGDLTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMM 61
+G + ET R + +QLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMM
Sbjct: 20 YGAVEETAWKTERLGR-NQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMM 78
Query: 62 DDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVER 121
DDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVER
Sbjct: 79 DDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVER 138
Query: 122 LREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCGA 181
LREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCGA
Sbjct: 139 LREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKTGLALIKDCCGA 198
Query: 182 TQCNIM 187
TQCNIM
Sbjct: 199 TQCNIM 204
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 65.5 bits (158), Expect = 3e-11
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 47 REVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKL 106
+++L+R+ESEL + +L + +D++ EL+ L+A PE K+ +++RE EL+++
Sbjct: 788 KQLLLRQESELMYKSKAQRLEEQQLDIEGELRRLMAKPEALKSLQERRREQELLEQYVST 847
Query: 107 VQKRDFLVDDAEVERLREQEEDKEMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSK 164
V R +VD + +RLREQEED+ + D + KL K +K S K++ PS+
Sbjct: 848 VNDRSDIVDSLDEDRLREQEEDQMLRDMIE-KLGLQRKKSKFRLSKIWSPKSKSSPSQ 904
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 58.9 bits (141), Expect = 2e-09
Identities = 32/105 (30%), Positives = 66/105 (62%)
Query: 34 EEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQK 93
+++ ++ K+ + +LVRRESEL ++ L + D++ EL+ L+ PEK+ T+ +
Sbjct: 719 DDMLVDWFKLIHEKHLLVRRESELIYVFKQQNLEQRQADVEYELRCLLNKPEKDWTEEDR 778
Query: 94 QREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFLRIK 138
RE L+Q++ L+++R+ +++ + +R RE+EEDK + ++ K
Sbjct: 779 AREKVLMQELVTLIEQRNAIINCLDEDRQREEEEDKMLEAMIKKK 823
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 57.0 bits (136), Expect = 9e-09
Identities = 31/93 (33%), Positives = 58/93 (62%)
Query: 39 EMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDE 98
E K+ + + +VR ESEL +++L L+QEL+ +A+ + KT+ + E +
Sbjct: 1896 EWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKTEEELSEEKQ 1955
Query: 99 LIQKIHKLVQKRDFLVDDAEVERLREQEEDKEM 131
++ ++ ++V++RD LV E +RLRE+EEDK++
Sbjct: 1956 ILNEMLEVVEQRDSLVALLEEQRLREREEDKDL 1988
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 55.8 bits (133), Expect = 2e-08
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 12 GRRSAKKDQLDIISMAETTMMPEEIEL-EMAKIQRLREVLVRRESELRFMMDDIQLCKDI 70
GR + + QL + + + EE+ + E + + L+RR+ +L+ +M++ L +
Sbjct: 1379 GRAAEVEMQLRSLMESGANKLQEEVLIQEWFTLVNKKNALIRRQDQLQLLMEEQDLERRF 1438
Query: 71 MDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKE 130
L +EL+ ++AI + +KT Q+ RE L++++ LV +RD LV D + + EED+
Sbjct: 1439 ELLSRELRAMLAIEDWQKTSAQQHREQLLLEELVSLVNQRDELVRDLDHKERIALEEDER 1498
Query: 131 MADFLRIKLKPLDK 144
+ L + + L +
Sbjct: 1499 LERGLEQRRRKLSR 1512
>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 54.3 bits (129), Expect = 6e-08
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 23 IISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVA 82
++ T E + E + + L+RR ++L + + L + L +EL+ ++A
Sbjct: 1031 LMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLA 1090
Query: 83 IPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEM 131
I + +KT+ QK+RE L+ ++ LV KRD LV D + + + +EED+ +
Sbjct: 1091 IEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHL 1139
>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 54.3 bits (129), Expect = 6e-08
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 23 IISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVA 82
++ T E + E + + L+RR ++L + + L + L +EL+ ++A
Sbjct: 1031 LMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLA 1090
Query: 83 IPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEM 131
I + +KT+ QK+RE L+ ++ LV KRD LV D + + + +EED+ +
Sbjct: 1091 IEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHL 1139
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 54.3 bits (129), Expect = 6e-08
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 23 IISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVA 82
++ T E + E + + L+RR ++L + + L + L +EL+ ++A
Sbjct: 1067 LMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLA 1126
Query: 83 IPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEM 131
I + +KT+ QK+RE L+ ++ LV KRD LV D + + + +EED+ +
Sbjct: 1127 IEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHL 1175
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 54.3 bits (129), Expect = 6e-08
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 23 IISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVA 82
++ T E + E + + L+RR ++L + + L + L +EL+ ++A
Sbjct: 1102 LMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLA 1161
Query: 83 IPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEM 131
I + +KT+ QK+RE L+ ++ LV KRD LV D + + + +EED+ +
Sbjct: 1162 IEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHL 1210
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 53.5 bits (127), Expect = 1e-07
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 16 AKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQ 75
A + + D + E ++ E +L + K + L+R ESEL M +++L L+Q
Sbjct: 571 ALRGEADSGTQDEAQLLQEWFKLVLEKNK-----LMRYESELLIMAQELELEDHQSRLEQ 625
Query: 76 ELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFL 135
+L+ + E +K + E E+ ++ +++++RD LVD E +R+RE+ ED+ F+
Sbjct: 626 KLREKMLKEESQKDEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHFESFV 685
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 44.7 bits (104), Expect = 5e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 50 LVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQK 109
LV E+EL + ++ L + L QEL+ + E KT +Q ED++++K+ LV +
Sbjct: 984 LVAEEAELMITVQELNLEEKQWQLDQELRGYMNREENLKTAADRQAEDQVLRKLVDLVNQ 1043
Query: 110 RDFLVDDAEVERLRE 124
RD L+ E RL E
Sbjct: 1044 RDALIRFQEERRLSE 1058
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 44.7 bits (104), Expect = 5e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 50 LVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQK 109
LV E+EL + ++ L + L QEL+ + E KT +Q ED++++K+ LV +
Sbjct: 898 LVAEEAELMITVQELNLEEKQWQLDQELRGYMNREENLKTAADRQAEDQVLRKLVDLVNQ 957
Query: 110 RDFLVDDAEVERLRE 124
RD L+ E RL E
Sbjct: 958 RDALIRFQEERRLSE 972
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 40.8 bits (94), Expect = 7e-04
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Query: 24 ISMAETTMMPEEIELEMAKI-QRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVA 82
+S ++ + M EE+E + ++ Q+L+E ++R+ +LR + Q+ E +L
Sbjct: 497 LSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQM---------EKSHLKH 547
Query: 83 IPEKEKTKLQKQRE---DELIQKIHK----LVQKRDFLVDDAEVERLREQEEDKEMADFL 135
I EK+ LQ + + ++ +KIHK L +K + L EV+RL+ Q+ D + +F
Sbjct: 548 IYEKKAHDLQSELDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFK 607
Query: 136 R 136
R
Sbjct: 608 R 608
Score = 31.6 bits (70), Expect = 0.42
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 13 RRSAKKDQLDIISMAETTMMPEEIELEMAKIQRL-REVLVRRESELRFMMDDIQLCKDIM 71
R++ + ++L + ++ E I K+Q L R+ V RE++ + + ++C+
Sbjct: 289 RKNNEIEELKTLYRSKQHETEETIRKLEKKVQTLIRDCQVIRETKEDQIAELKKICEQST 348
Query: 72 -----DLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQE 126
D +++L N VA E+EK LQKQ + I +L++ + ++ E E + + +
Sbjct: 349 ESLNNDWEKKLHNAVAEMEQEKFDLQKQH----TENIQELLEDTNVRLNKMESEYMAQTQ 404
Query: 127 EDKEMADFLRIKLKPL 142
M L +++ L
Sbjct: 405 STNHMIKELEARVQQL 420
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/131 (25%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 16 AKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKD-IMDL- 73
A++D+++ ++ A+ + + +LE +++ +++ + E R + D++L ++ IMD+
Sbjct: 1018 AEEDKVNTLTKAKIKLEQQVDDLE-GSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDIE 1076
Query: 74 --KQELQNLVAIPEKEKTKLQKQREDE------LIQKIHKLVQKRDFLVDDAEVERLREQ 125
KQ+L + E E + LQ + EDE L +KI +L + + L ++ E ER
Sbjct: 1077 NEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRA 1136
Query: 126 EEDKEMADFLR 136
+ +K+ +D R
Sbjct: 1137 KAEKQRSDLSR 1147
Score = 30.4 bits (67), Expect = 0.93
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 35 EIELEMAKIQRLREVLVRRESELRFMMDDI-QLCKDIMDLKQELQNLVAIPEKEKTKLQK 93
E+ ++ +QR+++ L + +SE++ +DD+ + + K L+ + E + ++L K
Sbjct: 1208 ELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSEL-K 1266
Query: 94 QREDELIQKIHKLVQKRDFL-VDDAEVERLREQEE 127
+E+E + I+ L +R L + E R +++E
Sbjct: 1267 SKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKE 1301
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/131 (25%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 16 AKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKD-IMDL- 73
A++D+++ ++ A+ + + +LE +++ +++ + E R + D++L ++ IMD+
Sbjct: 1018 AEEDKVNTLTKAKIKLEQQVDDLE-GSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDIE 1076
Query: 74 --KQELQNLVAIPEKEKTKLQKQREDE------LIQKIHKLVQKRDFLVDDAEVERLREQ 125
KQ+L + E E + LQ + EDE L +KI +L + + L ++ E ER
Sbjct: 1077 NEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRA 1136
Query: 126 EEDKEMADFLR 136
+ +K+ +D R
Sbjct: 1137 KAEKQRSDLSR 1147
Score = 30.4 bits (67), Expect = 0.93
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 35 EIELEMAKIQRLREVLVRRESELRFMMDDI-QLCKDIMDLKQELQNLVAIPEKEKTKLQK 93
E+ ++ +QR+++ L + +SE++ +DD+ + + K L+ + E + ++L K
Sbjct: 1208 ELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSEL-K 1266
Query: 94 QREDELIQKIHKLVQKRDFL-VDDAEVERLREQEE 127
+E+E + I+ L +R L + E R +++E
Sbjct: 1267 SKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKE 1301
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/155 (21%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 13 RRSAKKDQLDIISMAETTMMPEEIELEM-AKIQRLREVLVRRESELRFMMDDIQLCKDIM 71
+++ KK + I+ E ++ +I + +K + LR + + ELRF+ + Q + +
Sbjct: 789 KKTLKKTRKFIVDGVEVSVTTSKIVTDSDSKTEELRFLRRQELRELRFLQKEEQRAQQQL 848
Query: 72 DLKQELQNLVAIPEKEKTKLQKQRE-DELIQKIHKLVQKRDFLVDDAEVERLREQ----- 125
+ K + Q E+ + K+R+ D+ I+ + K ++ ++ RLR++
Sbjct: 849 NSKLQQQREQIFRRFEQEMMSKKRQYDQEIENLEKQQKQTIERLEQEHTNRLRDEAKRIK 908
Query: 126 -EEDKEMADFLRI----KLKPLDKVTKSPASSRAE 155
E++KE++ F + K + +++V K+P R E
Sbjct: 909 GEQEKELSKFQNMLKNRKKEVINEVEKAPKELRKE 943
Score = 28.1 bits (61), Expect = 4.6
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 38 LEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTK-LQKQRE 96
LE RLR+ R + E + Q + + K+E+ N V KE K L K+R+
Sbjct: 892 LEQEHTNRLRDEAKRIKGEQEKELSKFQ--NMLKNRKKEVINEVEKAPKELRKELMKRRK 949
Query: 97 DELIQKIH----KLVQKRDFLVDDAEVERLREQEED 128
+EL Q H + VQK+ +D + + +++Q+ +
Sbjct: 950 EELAQSQHAQEQEFVQKQQQELDGSLKKIIQQQKAE 985
Score = 27.3 bits (59), Expect = 7.9
Identities = 18/75 (24%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 85 EKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLRE--QEEDKEMADFLRIKLKPL 142
E + LQ Q E ++++H+L ++ L+ + E ++L+E +E +E+ ++ R KL+P
Sbjct: 1128 ENQMRDLQLQCEAN-VRELHQLQNEKCHLLVEHETQKLKELDEEHSQELKEW-REKLRPR 1185
Query: 143 DKVTKSPASSRAEKK 157
K + + + +++
Sbjct: 1186 KKTLEEEFARKLQEQ 1200
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 38.9 bits (89), Expect = 0.003
Identities = 32/131 (24%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 16 AKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCK----DIM 71
A++D+++ ++ A+ + + +LE +++ +++ + E R + D++L + DI
Sbjct: 1016 AEEDKVNTLTKAKIKLEQQVDDLE-GSLEQEKKIRMDLERAKRKLEGDLKLAQESTMDIE 1074
Query: 72 DLKQELQNLVAIPEKEKTKLQKQREDE------LIQKIHKLVQKRDFLVDDAEVERLREQ 125
+ KQ+L + E E + LQ + EDE L +KI +L + + L ++ E ER
Sbjct: 1075 NDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRA 1134
Query: 126 EEDKEMADFLR 136
+ +K+ +D R
Sbjct: 1135 KAEKQRSDLSR 1145
Score = 29.3 bits (64), Expect = 2.1
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 35 EIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQ 94
E+ ++ +QR+++ L + +SE++ +DD L ++ + + NL K+ +
Sbjct: 1206 ELGEQIDNLQRVKQKLEKEKSEMKMEIDD--LASNMETVSKAKGNL--------EKMCRA 1255
Query: 95 REDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKE 130
ED+L +I +++ L++D +R R Q E E
Sbjct: 1256 LEDQL-SEIKTKEEEQQRLINDLTAQRARLQTESGE 1290
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 38.9 bits (89), Expect = 0.003
Identities = 34/161 (21%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 10 CMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKD 69
C + K+Q +++ +E + E+++ + ++++++++ + +++L + D +
Sbjct: 298 CKETIQSHKEQCTLLT-SEKEALQEQLDERLQELEKIKDLHMAEKTKLITQLRDAKNL-- 354
Query: 70 IMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDK 129
I L+Q+ ++A +++ + + +E+E+ Q ++ Q + E LREQ+E
Sbjct: 355 IEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMT------TQGEELREQKEKS 408
Query: 130 EMADFLRIKLKPLDKVTKSPASSRAEKKAEPPPSKPTVAKT 170
E A F ++ K L K+ +R + KAE T+ KT
Sbjct: 409 ERAAFEELE-KALSTAQKT-EEARRKLKAEMDEQIKTIEKT 447
Score = 37.7 bits (86), Expect = 0.006
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 5 LTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDI 64
+TE + + + Q + T + +E+ + + ++E L ++ E+
Sbjct: 1317 VTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEIS------ 1370
Query: 65 QLCKDIMDLKQELQNLVAIPEKEK--TKLQKQREDELIQKIHKLVQKRDFLVDDAEVERL 122
L K + DL +LQN +++ EKE + L+KQ ++E + + + VQ F VD E++
Sbjct: 1371 SLSKQLTDLNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQ-VQDLSFKVDTLSKEKI 1429
Query: 123 REQEE 127
E+
Sbjct: 1430 SALEQ 1434
Score = 32.3 bits (72), Expect = 0.24
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 17 KKDQLDIISMAETTMMPEEIEL-EMAKIQ---RLREVLVRRESELRFMMDDIQLCKDIMD 72
+++ D+IS+ E + + EL E+ +IQ + +EV ++ L F + ++ K+I
Sbjct: 1037 RRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITW 1096
Query: 73 LKQE-------LQNLVAIPEKEKTKLQKQREDELIQKIH---------KLVQKRDFLVDD 116
LK+E L L +++ + +DE K H K +++ FL +
Sbjct: 1097 LKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDETKLKAHLEKLEVDLNKSLKENTFLQEQ 1156
Query: 117 AEVERLREQEEDKEMADFLRIKLKPLDKVTKSPASS--RAEKKAEPPPSKPTVAKTGLAL 174
VE EEDK L KLK D+ +S SS ++ K E + LA+
Sbjct: 1157 L-VELKMLAEEDKRKVSELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAI 1215
Query: 175 IKD-CCGATQ 183
D CC T+
Sbjct: 1216 QLDICCKKTE 1225
Score = 31.2 bits (69), Expect = 0.54
Identities = 22/118 (18%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 14 RSAKKDQLDIISMAETTMMPEEIELEMAKIQRLRE-VLVRRESELRFMMDDIQLCKDIMD 72
R + + +L + +M + E ++AK+Q+L E L R+E EL + + +
Sbjct: 452 RISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTRE-----RE 506
Query: 73 LKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKE 130
+++++ + + E K+ +++E + + +L ++ ++ ++E +LR+ +++ E
Sbjct: 507 FQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQKKAILTESE-NKLRDLQQEAE 563
>gi|9910266 kinesin family member 15 [Homo sapiens]
Length = 1388
Score = 38.9 bits (89), Expect = 0.003
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 17 KKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQ---LCKDIMDL 73
K++ DI + ++ E + K Q + + ++ LR + +DI+ LC+D+
Sbjct: 1009 KQELKDINCKYNSALVDREESRVLIKKQEVDILDLKETLRLRILSEDIERDMLCEDLAHA 1068
Query: 74 KQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMAD 133
++L L +K LQ +E+ + K++ L+ + + + +++EE ++ +
Sbjct: 1069 TEQLNMLTEASKKHSGLLQSAQEE---------LTKKEALIQELQHKLNQKKEEVEQKKN 1119
Query: 134 FLRIKLKPLDKVTKSPASSRAEKKAEP 160
K++ L+ V S A K P
Sbjct: 1120 EYNFKMRQLEHVMDSAAEDPQSPKTPP 1146
Score = 32.3 bits (72), Expect = 0.24
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 13 RRSAKKDQLDIISMAETTMMPE--EIELEMAKIQRLREVLVRRE---SELRFMMD-DIQL 66
+ ++ K+ L ++ E + E +MAK+Q+L E L+ E S L D D ++
Sbjct: 924 KENSSKEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESLLATEKVISSLEKSRDSDKKV 983
Query: 67 CKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVER--LRE 124
D+M+ QEL+ V EKT + D L Q++ + K + + D E R +++
Sbjct: 984 VADLMNQIQELRTSVC----EKT----ETIDTLKQELKDINCKYNSALVDREESRVLIKK 1035
Query: 125 QEED-KEMADFLRIKL 139
QE D ++ + LR+++
Sbjct: 1036 QEVDILDLKETLRLRI 1051
>gi|150010604 kinesin family member 4B [Homo sapiens]
Length = 1234
Score = 38.1 bits (87), Expect = 0.004
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 34 EEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEK---EKTK 90
+ +ELE+ +Q+ +E LVR + ++ +L + L QEL+ +A +K E++K
Sbjct: 562 KNLELEVINLQKEKEELVRELQTAKKNVNQAKLSEHRHKLLQELEGQIADLKKKLNEQSK 621
Query: 91 LQKQRE------DELIQKIHKLVQKRDFLV----DDAEVERLREQEEDKEMADFLRIKLK 140
L K +E +L Q+I + +R L+ +DAE R +Q++DKE+ I+LK
Sbjct: 622 LLKLKESTERTVSKLNQEIWMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEV-----IQLK 676
Query: 141 PLDK 144
D+
Sbjct: 677 ERDR 680
>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
subfamily a-like [Homo sapiens]
Length = 432
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 44 QRLREVLVR-RESELRFMMDDIQLCKDIMDLKQELQNLVA---IPEKEKT--KLQKQRED 97
+RLRE R RE E R + +LC+ L+++ + L +P +E+ +++K +
Sbjct: 199 ERLREQEERLREQEERLCEQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLKQ 258
Query: 98 ELIQKIHKLVQKRDFLVDDAEV----ERLREQEEDKEMADFLR--IKLKPLDKVTKSPAS 151
E Q+ + + +R+ L+D+ E ERLR+Q+E + LR +L+ L+++ +
Sbjct: 259 ERRQEEQERLLERERLLDEVEELLEQERLRQQDERLWQQETLRELERLRELERMLELGWE 318
Query: 152 SRAEKKAEP 160
+ E++AEP
Sbjct: 319 ALYEQRAEP 327
>gi|18390344 ATR interacting protein isoform 2 [Homo sapiens]
Length = 764
Score = 38.1 bits (87), Expect = 0.004
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 28 ETTMMPEEIELEM--AKIQRLREVLVRRESELRFMMDDIQLCKDIM----DLKQELQNLV 81
ET + + ELE+ A+ + L+E + E E+ +I++ +D + + +E +
Sbjct: 104 ETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSH 163
Query: 82 AIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFL 135
+ E+EKT+ +E E +K+ L + F DAE+ LR + + E A+ L
Sbjct: 164 FLLEQEKTQALSDKEKEFSKKLQSLQSELQF--KDAEMNELRTKLQTSERANKL 215
>gi|18390347 ATR interacting protein isoform 1 [Homo sapiens]
Length = 791
Score = 38.1 bits (87), Expect = 0.004
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 28 ETTMMPEEIELEM--AKIQRLREVLVRRESELRFMMDDIQLCKDIM----DLKQELQNLV 81
ET + + ELE+ A+ + L+E + E E+ +I++ +D + + +E +
Sbjct: 104 ETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSH 163
Query: 82 AIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFL 135
+ E+EKT+ +E E +K+ L + F DAE+ LR + + E A+ L
Sbjct: 164 FLLEQEKTQALSDKEKEFSKKLQSLQSELQF--KDAEMNELRTKLQTSERANKL 215
>gi|154937324 hypothetical protein LOC440295 [Homo sapiens]
Length = 432
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 44 QRLREVLVR-RESELRFMMDDIQLCKDIMDLKQELQNLVA---IPEKEKT--KLQKQRED 97
+RLRE R RE E R + +LC+ L+++ + L +P +E+ +++K +
Sbjct: 199 ERLREQEERLREQEERLCEQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLKQ 258
Query: 98 ELIQKIHKLVQKRDFLVDDAEV----ERLREQEEDKEMADFLR--IKLKPLDKVTKSPAS 151
E Q+ + + +R+ L+D+ E ERLR+Q+E + LR +L+ L+++ +
Sbjct: 259 ERRQEEQERLLERERLLDEVEELLEQERLRQQDERLWQQETLRELERLRELERMLELGWE 318
Query: 152 SRAEKKAEP 160
+ E++AEP
Sbjct: 319 ALYEQRAEP 327
>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 432
Score = 37.7 bits (86), Expect = 0.006
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 44 QRLREVLVR-RESELRFMMDDIQLCKD---IMDLKQELQNLVAIPEKEKT--KLQKQRED 97
+RLRE R RE E R + +LC+ + + ++ L +P +E+ +++K E
Sbjct: 199 ERLREQEERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQ 258
Query: 98 ELIQKIHKLVQKRDFLVDDAEV----ERLREQEEDKEMADFLR--IKLKPLDKVTKSPAS 151
E Q+ + + +R+ L+D+ E ERLR+Q+E + LR +L+ L+++ +
Sbjct: 259 ERRQEEQERLLERERLLDEVEELLEQERLRQQDERLWQQETLRELERLRELERMLELGWE 318
Query: 152 SRAEKKAEP 160
+ E++AEP
Sbjct: 319 ALYEQRAEP 327
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 37.7 bits (86), Expect = 0.006
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 34 EEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMD---LKQELQNLVAIPEKEKTK 90
+E+ +E K++R +L L+ + D QL K + + L Q+L+ +++ +
Sbjct: 236 QEMFIEQNKLKRQSHLL------LQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKE 289
Query: 91 LQKQREDELIQK-IHKLVQKRDFLVDDAEVERLREQEEDKEMADFLRIKLKPLDKVTKSP 149
L++Q E+E + K IH L Q+ + L +D + L+ Q + E A L+ + L K
Sbjct: 290 LEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSE-EKARNLKHSVDELQKRVNQS 348
Query: 150 ASSRAEKKAEPPPSKP 165
+S PPP P
Sbjct: 349 ENSVPPPPPPPPPLPP 364
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 37.7 bits (86), Expect = 0.006
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 34 EEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMD---LKQELQNLVAIPEKEKTK 90
+E+ +E K++R +L L+ + D QL K + + L Q+L+ +++ +
Sbjct: 236 QEMFIEQNKLKRQSHLL------LQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKE 289
Query: 91 LQKQREDELIQK-IHKLVQKRDFLVDDAEVERLREQEEDKEMADFLRIKLKPLDKVTKSP 149
L++Q E+E + K IH L Q+ + L +D + L+ Q + E A L+ + L K
Sbjct: 290 LEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSE-EKARNLKHSVDELQKRVNQS 348
Query: 150 ASSRAEKKAEPPPSKP 165
+S PPP P
Sbjct: 349 ENSVPPPPPPPPPLPP 364
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 43 IQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQ-NLVAIPEKEKTKLQKQREDELIQ 101
+Q+L++ L +R+ ELR + QL + L Q +Q N++ +EK L ++RE+E I+
Sbjct: 2037 VQQLQQALAQRDEELRHQQEREQLLEK--SLAQRVQENMI----QEKQNLGQEREEEEIR 2090
Query: 102 KIHKLVQKRDFLVDDAEVERLREQE 126
+H+ V++ + E E L +E
Sbjct: 2091 GLHQSVRELQLTLAQKEQEILELRE 2115
Score = 35.8 bits (81), Expect = 0.022
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 17 KKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQE 76
K + + + +T + + EL+ A Q ++ +E + D + L K + DLK +
Sbjct: 959 KLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQ 1018
Query: 77 L------QNLVAIPEKEK-------TKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLR 123
L Q LV +EK ++QK+ E E L++K L+ E + +R
Sbjct: 1019 LVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIR 1078
Query: 124 EQE 126
+QE
Sbjct: 1079 QQE 1081
Score = 31.6 bits (70), Expect = 0.42
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 34 EEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQK 93
EE+E +IQ L + +++ L + D++ +DL+QE I E EK +
Sbjct: 1435 EEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQE-----QIQELEKCR--- 1486
Query: 94 QREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKE-MADFLRIKLKPLDKVTKSPASS 152
+++ + VQ+R+ + + E++RE E+D+E + L +L L+K + S
Sbjct: 1487 ----SVLEHLPMAVQEREQKL-TVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQ 1541
Query: 153 RAE 155
R +
Sbjct: 1542 RGQ 1544
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 37.4 bits (85), Expect = 0.008
Identities = 29/125 (23%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 17 KKDQLDIISMAETTMMPEEIELEMAK---IQRLREVLVRRESELRFMMDDIQLCKDIMDL 73
++++ ++ T +E+E + K +Q+ E L+R E E R + + C++ +L
Sbjct: 1057 QQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEEL 1116
Query: 74 KQELQNLVAIPEKEKTKLQK-----QREDELIQKIHKLVQKRDFLVDDAEVERLREQEED 128
+QE + L+ E+EK + Q+ + E+E+ Q+ +L+++ E+ER +EE+
Sbjct: 1117 QQEEEQLLR-EEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175
Query: 129 KEMAD 133
+ +
Sbjct: 1176 LQQEE 1180
Score = 34.7 bits (78), Expect = 0.049
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 1 MWGDLTETGCMGRRSAKKDQLDIISMAETTMMPEEIELEMAKIQRLR------EVLVRRE 54
+W E R A+++QL ET P+E +L ++ LR + RRE
Sbjct: 173 LWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRE 232
Query: 55 SELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQK---------QREDELIQKIHK 105
+ R ++ + +E + + KE+ KLQ+ Q E+E ++K+ +
Sbjct: 233 RQDRVFQEEEE---------KEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLER 283
Query: 106 LVQKRDFLVDDAEVERLREQEE 127
+R+ ++ + +RLR +++
Sbjct: 284 QELRRERQEEEQQQQRLRREQQ 305
Score = 33.1 bits (74), Expect = 0.14
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 28 ETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKE 87
E + EE +L +++R R E +LR + QL + ++ L+ PE+E
Sbjct: 1706 ERKFLQEEQQLRRQELERK----FREEEQLRQETEQEQLRRQER-YRKILEEEQLRPERE 1760
Query: 88 KTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMAD 133
+ +L++Q D ++ +L Q+R E ++LR QE D++ +
Sbjct: 1761 EQQLRRQERDRKFREEEQLRQER-------EEQQLRSQESDRKFRE 1799
Score = 32.0 bits (71), Expect = 0.32
Identities = 25/129 (19%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 35 EIELEMAKIQRLREVLVRRESELRF---MMDDIQLCKDIMDLKQELQNLVAIPEKEKTKL 91
E +L + +R + L R+E E R + + QL ++ + +++L + +E+ +L
Sbjct: 504 EQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQL-----LKREEEKRL 558
Query: 92 QKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFLRIKLKPLDKVTKSPAS 151
+++R ++ +++ + ++RD L+ E R + + ++E R+K + ++++ +
Sbjct: 559 EQERREQRLKREQE--ERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERR 616
Query: 152 SRAEKKAEP 160
+ K+ EP
Sbjct: 617 EQRLKREEP 625
Score = 31.6 bits (70), Expect = 0.42
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 45 RLREVLVRR-ESELRFMMDDIQLCKDI--MDLKQEL-----QNLVAIPEKEKTKLQKQ-- 94
RL E VRR E E +FM D+ QL + L+QE ++ + E+E+ +L +Q
Sbjct: 1582 RLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQER 1641
Query: 95 ---------------REDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMAD 133
RE +L + ++ + L+ + E ++LR QE D++ +
Sbjct: 1642 DRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFRE 1695
Score = 31.2 bits (69), Expect = 0.54
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 42 KIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQ 101
K+Q+ E L+ E E R + + ++ +L+QE + L+ +E+ K ++Q + +
Sbjct: 965 KLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLL---REEREKRRRQEWERQYR 1021
Query: 102 KIHKLVQKRDFLV-DDAEVERLREQE 126
K +L Q+ + L+ ++ E RL+E+E
Sbjct: 1022 KKDELQQEEEQLLREEREKRRLQERE 1047
Score = 30.8 bits (68), Expect = 0.71
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 12 GRRSAKKDQLDIISMAETTMMPEEIE-LEMAKIQRLREVLVRRESEL------RFMMDDI 64
G+R +K Q +AE E+ E LE QR E L R+ E R + +
Sbjct: 134 GQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQL 193
Query: 65 QLCK-----DIMDLKQ----ELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVD 115
Q CK + D +Q EL L +EK + +++R+D + Q+ + ++ V
Sbjct: 194 QSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVL 253
Query: 116 DAEVERLREQEEDKE 130
E E+L+E+E ++
Sbjct: 254 RKEEEKLQEEEPQRQ 268
Score = 30.0 bits (66), Expect = 1.2
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 13 RRSAKKDQLDIISMAETTMMPEEIEL-----------EMAKIQRLREVLVRRESELRFMM 61
R+ KKD+L E ++ EE E E ++Q+ E L+ E E R
Sbjct: 1018 RQYRKKDELQ---QEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQ 1074
Query: 62 DDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQR----EDELIQKIHKLVQKRDFLVDDA 117
+ + + +L+QE + L+ +++ + +++R E+EL Q+ +L+++
Sbjct: 1075 ELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQ 1134
Query: 118 EVERLREQEEDKEMADFLRIKLKP 141
E+ER +EE+ + + ++ +P
Sbjct: 1135 ELERQYREEEEVQQEEEQLLREEP 1158
Score = 29.6 bits (65), Expect = 1.6
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 17 KKDQLDIISMAETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQE 76
++ +L+ E + E + ++ + +R R++L E +LR ++ QL + D K
Sbjct: 1717 RRQELERKFREEEQLRQETEQEQLRRQERYRKIL--EEEQLRPEREEQQLRRQERDRKFR 1774
Query: 77 LQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEED 128
+ + E+E+ +L+ Q D ++ +L Q+R E ++LR Q+ D
Sbjct: 1775 EEEQLR-QEREEQQLRSQESDRKFREEEQLRQER-------EEQQLRPQQRD 1818
Score = 29.3 bits (64), Expect = 2.1
Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Query: 37 ELEMAKIQRLR-EVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQR 95
E ++ + Q+LR E +RRE +LR + QL ++ L++E + E+ + K +++R
Sbjct: 392 EQQLRREQQLRREQQLRREQQLR---REQQLRRE-QQLRREQEE-----ERHEQKHEQER 442
Query: 96 EDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKE 130
++ +++ + ++RD+L + E ER EQE K+
Sbjct: 443 REQRLKREQE--ERRDWLKREEETER-HEQERRKQ 474
Score = 27.7 bits (60), Expect = 6.0
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 28 ETTMMPEEIELEMAKIQRLREVLVRRESELRFMMDDIQLCKDIMDLKQELQNLVAIP--- 84
ET + EE +L+ + QR RE L E +LR ++ +L ++ + +Q+ Q L
Sbjct: 250 ETVLRKEEEKLQEEEPQRQRE-LQEEEEQLR-KLERQELRRERQEEEQQQQRLRREQQLR 307
Query: 85 ---EKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVER---LREQEEDKEMADFLR 136
E+E+ + Q++R ++ ++ + ++ L + E R LR ++E++ LR
Sbjct: 308 RKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLR 365
Score = 27.7 bits (60), Expect = 6.0
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 52 RRESELRFMMDDIQLCKDIMDLKQELQNLVAIPEKEKTKLQKQREDELIQKIHKLVQKRD 111
R++ E RF+ ++ + K++ + EKE L+++ + + ++ +L ++ D
Sbjct: 803 RQQREQRFLPEEEE--------KEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEED 854
Query: 112 FLVDDAEVERLREQEEDKE 130
L +D E R +EQ D++
Sbjct: 855 GLQEDQERRRSQEQRRDQK 873
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,808,485
Number of Sequences: 37866
Number of extensions: 301031
Number of successful extensions: 3283
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 2667
Number of HSP's gapped (non-prelim): 961
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.