Guide to the Human Genome
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Name: ECSIT Sequence: fasta or formatted (296aa) NCBI GI: 215599065
Description:

evolutionarily conserved signaling intermediate in Toll pathway isoform 2

Referenced in:

Toll-like Receptors

Other entries for this name:
alt prot [431aa] evolutionarily conserved signaling intermediate in Toll pathway i...
alt prot [217aa] evolutionarily conserved signaling intermediate in Toll pathway i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         22           3
 C cysteine            1.7          5           1
 D aspartate           3.7         11           1
 E glutamate           6.1         18           2
 F phenylalanine       4.7         14           1
 G glycine             7.8         23           2
 H histidine           2.7          8           1
 I isoleucine          4.1         12           2
 K lysine              3.7         11           1
 L leucine            10.5         31           2
 M methionine          2.7          8           1
 N asparagine          2.4          7           1
 P proline             9.8         29           2
 Q glutamine           5.7         17           2
 R arginine            8.4         25           2
 S serine              4.7         14           2
 T threonine           3.0          9           1
 V valine              7.4         22           1
 W tryptophan          1.4          4           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   evolutionarily conserved signaling intermediate in ... 
ECSIT                 0.892   evolutionarily conserved signaling intermediate in T...
ECSIT                 0.085   evolutionarily conserved signaling intermediate in ...
DISP1                 0.015   dispatched A 
LOC100293045          0.009   PREDICTED: hypothetical protein 
NF1                   0.009   neurofibromin isoform 1 
NF1                   0.009   neurofibromin isoform 2 
SLC16A10              0.009   solute carrier family 16, member 10 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
LOC401321             0.009   PREDICTED: hypothetical protein 
RB1                   0.007   retinoblastoma 1 
SREBF1                0.007   sterol regulatory element binding transcription fact...
SREBF1                0.007   sterol regulatory element binding transcription fact...
C20orf200             0.007   hypothetical protein LOC253868 
FOXP3                 0.005   forkhead box P3 isoform a 
HELZ                  0.005   helicase with zinc finger domain 
TRNP1                 0.005   TMF regulated nuclear protein 
BARHL2                0.005   BarH-like homeobox 2 
PALM3                 0.005   hypothetical protein LOC342979 
RARG                  0.005   retinoic acid receptor, gamma isoform 2 
PAK6                  0.005   p21-activated kinase 6 
PAK6                  0.005   p21-activated kinase 6 
PAK6                  0.005   p21-activated kinase 6 
ZSCAN16               0.005   zinc finger and SCAN domain containing 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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